* installing to library ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages’
* installing *source* package ‘Phase12Compare’ ...
** package ‘Phase12Compare’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-13 (Debian 13.2.0-23) 13.2.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpN76nTN/R.INSTALL21db49d6ee560/Phase12Compare/src'
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c SPSOCODE.cpp -o SPSOCODE.o
In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include/armadillo:26,
from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include/RcppArmadillo.h:29,
from SPSOCODE.cpp:3:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include/armadillo_bits/config.hpp:321:86: note: ‘#pragma message: INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed’
321 | #pragma message ("INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed")
| ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include/armadillo_bits/config.hpp:326:75: note: ‘#pragma message: INFO: suggest to use ARMA_WARN_LEVEL option instead’
326 | #pragma message ("INFO: suggest to use ARMA_WARN_LEVEL option instead")
| ^
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include/armadillo_bits/config.hpp:329:61: note: ‘#pragma message: INFO: see the documentation for details’
329 | #pragma message ("INFO: see the documentation for details")
| ^
SPSOCODE.cpp: In function ‘arma::mat MATMULT(arma::mat, arma::mat)’:
SPSOCODE.cpp:54:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
54 | for(j = 0 ;j<X.n_rows;j++){
| ~^~~~~~~~~
SPSOCODE.cpp:55:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
55 | for(k=0;k<PROD.n_cols;k++){
| ~^~~~~~~~~~~~
SPSOCODE.cpp:57:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
57 | for(m=0;m<X.n_cols;m++){
| ~^~~~~~~~~
SPSOCODE.cpp: In function ‘arma::vec GETBIN(arma::vec)’:
SPSOCODE.cpp:98:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
98 | for(j=1;j<PVEC.n_rows;j++){
| ~^~~~~~~~~~~~
SPSOCODE.cpp: In function ‘int ReturnOpt(arma::vec, arma::vec)’:
SPSOCODE.cpp:243:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
243 | for(j=0;j<DoseTried1.n_rows;j++){
| ~^~~~~~~~~~~~~~~~~~
SPSOCODE.cpp: In function ‘double GetMin(arma::vec)’:
SPSOCODE.cpp:387:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
387 | for(j=1;j<DESIRE.n_rows;j++){
| ~^~~~~~~~~~~~~~
SPSOCODE.cpp: In function ‘int GetOrderSum(arma::vec)’:
SPSOCODE.cpp:547:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
547 | for(k=1;k<Y.n_rows;k++){
| ~^~~~~~~~~
SPSOCODE.cpp: In function ‘arma::vec GlobalPropose(arma::vec, int)’:
SPSOCODE.cpp:601:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
601 | for(k=1;k<(MUPROP.n_rows-1);k++){
| ~^~~~~~~~~~~~~~~~~~
SPSOCODE.cpp:614:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
614 | for(k=1;k<(MUPROP.n_rows-1);k++){
| ~^~~~~~~~~~~~~~~~~~
SPSOCODE.cpp:628:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
628 | for(k=0;k<MUPROP.n_rows;k++){
| ~^~~~~~~~~~~~~~
SPSOCODE.cpp: In function ‘double Like(arma::vec, arma::vec, arma::vec, arma::vec, double, int)’:
SPSOCODE.cpp:700:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
700 | for(i=0;i<YE.n_rows;i++){
| ~^~~~~~~~~~
SPSOCODE.cpp:676:7: warning: unused variable ‘m’ [-Wunused-variable]
676 | int m=0;
| ^
SPSOCODE.cpp: In function ‘int GetDose1(arma::vec)’:
SPSOCODE.cpp:775:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
775 | for(j=0;j<DESIRE.n_rows;j++){
| ~^~~~~~~~~~~~~~
SPSOCODE.cpp:836:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
836 | if(which1==(cumprob.n_rows-1)){
| ~~~~~~^~~~~~~~~~~~~~~~~~~~
SPSOCODE.cpp: In function ‘int GetDose2(arma::vec, arma::vec)’:
SPSOCODE.cpp:890:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
890 | for(j=0;j<DoseTried1.n_rows;j++){
| ~^~~~~~~~~~~~~~~~~~
SPSOCODE.cpp:901:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
901 | for(j=0;j<Desire.n_rows;j++){
| ~^~~~~~~~~~~~~~
SPSOCODE.cpp: In function ‘int GetDose3(arma::vec, arma::vec)’:
SPSOCODE.cpp:942:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
942 | for(j=0;j<DoseTried1.n_rows;j++){
| ~^~~~~~~~~~~~~~~~~~
SPSOCODE.cpp:953:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
953 | for(j=0;j<Desire.n_rows;j++){
| ~^~~~~~~~~~~~~~
SPSOCODE.cpp: In function ‘int RandomDoseUT(arma::vec, arma::vec)’:
SPSOCODE.cpp:989:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
989 | for(j=0;j<DoseTried1.n_rows;j++){
| ~^~~~~~~~~~~~~~~~~~
SPSOCODE.cpp:1000:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
1000 | for(j=0;j<Desire.n_rows;j++){
| ~^~~~~~~~~~~~~~
SPSOCODE.cpp: In function ‘Rcpp::List RunAdaptiveEffToxTrialCORR(int, arma::vec, arma::vec, arma::vec, arma::mat, arma::vec, arma::vec, int, int, int, double, int, arma::mat)’:
SPSOCODE.cpp:1365:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
1365 | for(j=0;j<Dose.n_rows;j++){
| ~^~~~~~~~~~~~
SPSOCODE.cpp:1410:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
1410 | for(j=0;j<Dose.n_rows;j++){
| ~^~~~~~~~~~~~
SPSOCODE.cpp:1411:26: warning: comparison of integer expressions of different signedness: ‘arma::enable_if2<true, unsigned int>::result’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
1411 | if(sum(Doses2==j)>=cohort){
| ~~~~~~~~~~~~~~^~~~~~~~
SPSOCODE.cpp:1434:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
1434 | for(j=0;j<Dose.n_rows;j++){
| ~^~~~~~~~~~~~
SPSOCODE.cpp:1454:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
1454 | for(j=0;j<Dose.n_rows;j++){
| ~^~~~~~~~~~~~
SPSOCODE.cpp:1536:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
1536 | for(j=0;j<Dose.n_rows;j++){
| ~^~~~~~~~~~~~
SPSOCODE.cpp:1702:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
1702 | for(j=0;j<Dose.n_rows;j++){
| ~^~~~~~~~~~~~
SPSOCODE.cpp:1749:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
1749 | for(j=0;j<Dose.n_rows;j++){
| ~^~~~~~~~~~~~
SPSOCODE.cpp:1750:26: warning: comparison of integer expressions of different signedness: ‘arma::enable_if2<true, unsigned int>::result’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
1750 | if(sum(Doses2==j)>=cohort){
| ~~~~~~~~~~~~~~^~~~~~~~
SPSOCODE.cpp:1773:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
1773 | for(j=0;j<Dose.n_rows;j++){
| ~^~~~~~~~~~~~
SPSOCODE.cpp:1793:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
1793 | for(j=0;j<Dose.n_rows;j++){
| ~^~~~~~~~~~~~
SPSOCODE.cpp:1823:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
1823 | for(j=0;j<Dose.n_rows;j++){
| ~^~~~~~~~~~~~
SPSOCODE.cpp:1858:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
1858 | for(j=0;j<Dose.n_rows;j++){
| ~^~~~~~~~~~~~
SPSOCODE.cpp:1080:10: warning: unused variable ‘p’ [-Wunused-variable]
1080 | double p=0;
| ^
SPSOCODE.cpp:1081:10: warning: unused variable ‘pu’ [-Wunused-variable]
1081 | double pu=0;
| ^~
SPSOCODE.cpp:1082:10: warning: unused variable ‘pl’ [-Wunused-variable]
1082 | double pl=0;
| ^~
SPSOCODE.cpp:1083:10: warning: unused variable ‘tol’ [-Wunused-variable]
1083 | double tol=.005;
| ^~~
SPSOCODE.cpp:1109:7: warning: unused variable ‘Count’ [-Wunused-variable]
1109 | int Count=0;
| ^~~~~
SPSOCODE.cpp:1119:7: warning: unused variable ‘nREP’ [-Wunused-variable]
1119 | int nREP=0;
| ^~~~
SPSOCODE.cpp:1162:10: warning: unused variable ‘min1’ [-Wunused-variable]
1162 | double min1=0;
| ^~~~
SPSOCODE.cpp: In function ‘Rcpp::List RunAdaptiveEffToxTrialCORRCONTOUR(int, arma::vec, arma::vec, arma::vec, arma::vec, arma::vec, arma::vec, int, int, int, double, int, arma::mat)’:
SPSOCODE.cpp:2244:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
2244 | for(j=0;j<Dose.n_rows;j++){
| ~^~~~~~~~~~~~
SPSOCODE.cpp:2289:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
2289 | for(j=0;j<Dose.n_rows;j++){
| ~^~~~~~~~~~~~
SPSOCODE.cpp:2290:26: warning: comparison of integer expressions of different signedness: ‘arma::enable_if2<true, unsigned int>::result’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2290 | if(sum(Doses2==j)>=cohort){
| ~~~~~~~~~~~~~~^~~~~~~~
SPSOCODE.cpp:2309:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
2309 | for(j=0;j<Dose.n_rows;j++){
| ~^~~~~~~~~~~~
SPSOCODE.cpp:2328:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
2328 | for(j=0;j<Dose.n_rows;j++){
| ~^~~~~~~~~~~~
SPSOCODE.cpp:2400:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
2400 | for(j=0;j<Dose.n_rows;j++){
| ~^~~~~~~~~~~~
SPSOCODE.cpp:2566:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
2566 | for(j=0;j<Dose.n_rows;j++){
| ~^~~~~~~~~~~~
SPSOCODE.cpp:2610:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
2610 | for(j=0;j<Dose.n_rows;j++){
| ~^~~~~~~~~~~~
SPSOCODE.cpp:2611:26: warning: comparison of integer expressions of different signedness: ‘arma::enable_if2<true, unsigned int>::result’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2611 | if(sum(Doses2==j)>=cohort){
| ~~~~~~~~~~~~~~^~~~~~~~
SPSOCODE.cpp:2631:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
2631 | for(j=0;j<Dose.n_rows;j++){
| ~^~~~~~~~~~~~
SPSOCODE.cpp:2650:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
2650 | for(j=0;j<Dose.n_rows;j++){
| ~^~~~~~~~~~~~
SPSOCODE.cpp:2672:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
2672 | for(j=0;j<Dose.n_rows;j++){
| ~^~~~~~~~~~~~
SPSOCODE.cpp:2708:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
2708 | for(j=0;j<Dose.n_rows;j++){
| ~^~~~~~~~~~~~
SPSOCODE.cpp:1990:7: warning: unused variable ‘Count’ [-Wunused-variable]
1990 | int Count=0;
| ^~~~~
SPSOCODE.cpp:2000:7: warning: unused variable ‘nREP’ [-Wunused-variable]
2000 | int nREP=0;
| ^~~~
SPSOCODE.cpp:2043:10: warning: unused variable ‘min1’ [-Wunused-variable]
2043 | double min1=0;
| ^~~~
SPSOCODE.cpp: In function ‘Rcpp::List UTEFFTOX(arma::vec, arma::vec, arma::vec, arma::vec, arma::vec, arma::vec, double)’:
SPSOCODE.cpp:3408:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
3408 | for(k=1;k<ORDER.n_rows;k++){
| ~^~~~~~~~~~~~~
SPSOCODE.cpp:3521:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
3521 | for(k=1;k<ORDER.n_rows;k++){
| ~^~~~~~~~~~~~~
SPSOCODE.cpp:2821:10: warning: unused variable ‘phivar’ [-Wunused-variable]
2821 | double phivar=Hypervars[2]; //Variance parameter for frailty correlations
| ^~~~~~
SPSOCODE.cpp:2822:10: warning: variable ‘phi’ set but not used [-Wunused-but-set-variable]
2822 | double phi=0;
| ^~~
SPSOCODE.cpp:2893:10: warning: unused variable ‘epprop’ [-Wunused-variable]
2893 | double epprop = 0; //proposal values for epsilon
| ^~~~~~
SPSOCODE.cpp:2942:10: warning: unused variable ‘epEC’ [-Wunused-variable]
2942 | double epEC = 1;
| ^~~~
SPSOCODE.cpp:2943:10: warning: unused variable ‘epTC’ [-Wunused-variable]
2943 | double epTC = 1;
| ^~~~
SPSOCODE.cpp:2982:10: warning: unused variable ‘holdmin’ [-Wunused-variable]
2982 | double holdmin=1;
| ^~~~~~~
SPSOCODE.cpp: In function ‘Rcpp::List AssignEffTox(arma::vec, arma::vec, arma::vec, arma::vec, arma::vec, arma::vec, arma::vec, arma::vec, arma::vec, arma::vec, double)’:
SPSOCODE.cpp:4002:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
4002 | for(j=0;j<Dose.n_rows;j++){
| ~^~~~~~~~~~~~
SPSOCODE.cpp:4047:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
4047 | for(j=0;j<Dose.n_rows;j++){
| ~^~~~~~~~~~~~
SPSOCODE.cpp:4065:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
4065 | for(j=0;j<Dose.n_rows;j++){
| ~^~~~~~~~~~~~
SPSOCODE.cpp:4084:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
4084 | for(j=0;j<Dose.n_rows;j++){
| ~^~~~~~~~~~~~
SPSOCODE.cpp:4114:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
4114 | for(j=1;j<Dose.n_rows;j++){
| ~^~~~~~~~~~~~
SPSOCODE.cpp:3744:7: warning: unused variable ‘Stopped’ [-Wunused-variable]
3744 | int Stopped=0;
| ^~~~~~~
SPSOCODE.cpp:3791:7: warning: unused variable ‘Count’ [-Wunused-variable]
3791 | int Count=0;
| ^~~~~
SPSOCODE.cpp:3801:7: warning: unused variable ‘nREP’ [-Wunused-variable]
3801 | int nREP=0;
| ^~~~
SPSOCODE.cpp:3824:7: warning: unused variable ‘m’ [-Wunused-variable]
3824 | int m=0;
| ^
SPSOCODE.cpp:3841:7: warning: variable ‘STOPPED’ set but not used [-Wunused-but-set-variable]
3841 | int STOPPED=0;
| ^~~~~~~
SPSOCODE.cpp:3842:7: warning: unused variable ‘i’ [-Wunused-variable]
3842 | int i=0;
| ^
SPSOCODE.cpp:3844:10: warning: unused variable ‘min1’ [-Wunused-variable]
3844 | double min1=0;
| ^~~~
SPSOCODE.cpp:3848:7: warning: unused variable ‘nRep’ [-Wunused-variable]
3848 | int nRep=0;
| ^~~~
SPSOCODE.cpp: In function ‘Rcpp::List AssignEffToxUT(arma::vec, arma::vec, arma::vec, arma::vec, arma::vec, arma::vec, arma::vec, arma::mat, arma::vec, arma::vec, double)’:
SPSOCODE.cpp:4471:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
4471 | for(j=0;j<Dose.n_rows;j++){
| ~^~~~~~~~~~~~
SPSOCODE.cpp:4516:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
4516 | for(j=0;j<Dose.n_rows;j++){
| ~^~~~~~~~~~~~
SPSOCODE.cpp:4536:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
4536 | for(j=0;j<Dose.n_rows;j++){
| ~^~~~~~~~~~~~
SPSOCODE.cpp:4559:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
4559 | for(j=0;j<Dose.n_rows;j++){
| ~^~~~~~~~~~~~
SPSOCODE.cpp:4598:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
4598 | for(j=1;j<Dose.n_rows;j++){
| ~^~~~~~~~~~~~
SPSOCODE.cpp:4222:7: warning: unused variable ‘Stopped’ [-Wunused-variable]
4222 | int Stopped=0;
| ^~~~~~~
SPSOCODE.cpp:4240:10: warning: unused variable ‘p’ [-Wunused-variable]
4240 | double p=0;
| ^
SPSOCODE.cpp:4241:10: warning: unused variable ‘pu’ [-Wunused-variable]
4241 | double pu=0;
| ^~
SPSOCODE.cpp:4242:10: warning: unused variable ‘pl’ [-Wunused-variable]
4242 | double pl=0;
| ^~
SPSOCODE.cpp:4243:10: warning: unused variable ‘tol’ [-Wunused-variable]
4243 | double tol=.005;
| ^~~
SPSOCODE.cpp:4258:7: warning: unused variable ‘Count’ [-Wunused-variable]
4258 | int Count=0;
| ^~~~~
SPSOCODE.cpp:4268:7: warning: unused variable ‘nREP’ [-Wunused-variable]
4268 | int nREP=0;
| ^~~~
SPSOCODE.cpp:4294:7: warning: unused variable ‘m’ [-Wunused-variable]
4294 | int m=0;
| ^
SPSOCODE.cpp:4311:7: warning: variable ‘STOPPED’ set but not used [-Wunused-but-set-variable]
4311 | int STOPPED=0;
| ^~~~~~~
SPSOCODE.cpp:4312:7: warning: unused variable ‘i’ [-Wunused-variable]
4312 | int i=0;
| ^
SPSOCODE.cpp:4314:10: warning: unused variable ‘min1’ [-Wunused-variable]
4314 | double min1=0;
| ^~~~
SPSOCODE.cpp:4318:7: warning: unused variable ‘nRep’ [-Wunused-variable]
4318 | int nRep=0;
| ^~~~
g++-13 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o Phase12Compare.so RcppExports.o SPSOCODE.o -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpN76nTN/R.INSTALL21db49d6ee560/Phase12Compare/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpN76nTN/R.INSTALL21db49d6ee560/Phase12Compare/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpN76nTN/R.INSTALL21db49d6ee560/Phase12Compare/src'
installing to /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/00LOCK-Phase12Compare/00new/Phase12Compare/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (Phase12Compare)