• using R Under development (unstable) (2026-07-31 r90332)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-16 (Debian 16.1.0-3) 16.1.0     GNU Fortran (Debian 16.1.0-3) 16.1.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-08-01 12:28:31 UTC
• checking for file ‘PTXQC/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘PTXQC’ version ‘1.1.5’
• package encoding: UTF-8
• checking CRAN incoming feasibility ... [1s/2s] OK
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking serialization versions ... OK
• checking whether package ‘PTXQC’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [2s/3s] OK
• checking whether the package can be loaded with stated dependencies ... [2s/2s] OK
• checking whether the package can be unloaded cleanly ... [2s/2s] OK
• checking whether the namespace can be loaded with stated dependencies ... [1s/2s] OK
• checking whether the namespace can be unloaded cleanly ... [2s/3s] OK
• checking loading without being on the library search path ... [2s/3s] OK
• checking whether startup messages can be suppressed ... [2s/3s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [21s/28s] OK
• checking Rd files ... [1s/1s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... NOTE Rd files without \usage:   ‘MQDataReader-class.Rd’ ‘qcMetric-class.Rd’ \arguments should not be documented without \usage.
• checking for unstated dependencies in examples ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [15s/22s] OK Examples with CPU (user + system) or elapsed time > 5s                 user system elapsed qcMetric-class 3.533 0.065 6.049
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [69s/98s] OK   Running ‘testthat.R’ [69s/98s]
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [8s/11s] OK
• checking PDF version of manual ... [6s/9s] OK
• checking HTML version of manual ... [2s/2s] OK
• checking for non-standard things in the check directory ... OK
• checking for new files in some other directories ... NOTE Found the following files/directories:   ‘~/tmp/scratch/Rtmp0FDgYj’ ‘~/tmp/scratch/Rtmp0FoJXT’   ‘~/tmp/scratch/Rtmp0UTBVD’ ‘~/tmp/scratch/Rtmp0Y8UXF’   ‘~/tmp/scratch/Rtmp0d4vNH’ ‘~/tmp/scratch/Rtmp0f8V15’   ‘~/tmp/scratch/Rtmp0m4hsk’ ‘~/tmp/scratch/Rtmp1GDiF4’   ‘~/tmp/scratch/Rtmp1cH0Uj’ ‘~/tmp/scratch/Rtmp1pCXAE’   ‘~/tmp/scratch/Rtmp2ALTV3’ ‘~/tmp/scratch/Rtmp2Kf6yk’   ‘~/tmp/scratch/Rtmp2RjRj4’ ‘~/tmp/scratch/Rtmp2e1VEx’   ‘~/tmp/scratch/Rtmp3Dan9h’ ‘~/tmp/scratch/Rtmp3YarbZ’   ‘~/tmp/scratch/Rtmp42o8tk’ ‘~/tmp/scratch/Rtmp48IWXD’   ‘~/tmp/scratch/Rtmp4AJUQR’ ‘~/tmp/scratch/Rtmp4Neibr’   ‘~/tmp/scratch/Rtmp4Uh6B5’ ‘~/tmp/scratch/Rtmp5kuGJr’   ‘~/tmp/scratch/Rtmp8VltQ9’ ‘~/tmp/scratch/Rtmp9eglBe’   ‘~/tmp/scratch/Rtmp9uwWud’ ‘~/tmp/scratch/Rtmp9wdZDt’   ‘~/tmp/scratch/RtmpA6OhIN’ ‘~/tmp/scratch/RtmpAKZrrm’   ‘~/tmp/scratch/RtmpBv104a’ ‘~/tmp/scratch/RtmpCVT7CY’   ‘~/tmp/scratch/RtmpCyhJEX’ ‘~/tmp/scratch/RtmpD741bJ’   ‘~/tmp/scratch/RtmpDEu6bk’ ‘~/tmp/scratch/RtmpDRSWrJ’   ‘~/tmp/scratch/RtmpDSTfr0’ ‘~/tmp/scratch/RtmpDcNXKg’   ‘~/tmp/scratch/RtmpDzoyf0’ ‘~/tmp/scratch/RtmpEIvPuB’   ‘~/tmp/scratch/RtmpEJLm4N’ ‘~/tmp/scratch/RtmpEK3ows’   ‘~/tmp/scratch/RtmpESBBq6’ ‘~/tmp/scratch/RtmpEvVF3f’   ‘~/tmp/scratch/RtmpFImQT9’ ‘~/tmp/scratch/RtmpFta9MU’   ‘~/tmp/scratch/RtmpGC7ueH’ ‘~/tmp/scratch/RtmpI9WlOk’   ‘~/tmp/scratch/RtmpIK2u5Z’ ‘~/tmp/scratch/RtmpIYmFPc’   ‘~/tmp/scratch/RtmpIfWi4j’ ‘~/tmp/scratch/RtmpJ43QLm’   ‘~/tmp/scratch/RtmpJNIRpy’ ‘~/tmp/scratch/RtmpJUOL2K’   ‘~/tmp/scratch/RtmpJmC23u’ ‘~/tmp/scratch/RtmpK4hGWA’   ‘~/tmp/scratch/RtmpLtr2wB’ ‘~/tmp/scratch/RtmpMMqv6P’   ‘~/tmp/scratch/RtmpMi71eL’ ‘~/tmp/scratch/RtmpMmgOCF’   ‘~/tmp/scratch/RtmpNHP52M’ ‘~/tmp/scratch/RtmpNgkmjn’   ‘~/tmp/scratch/RtmpOBnzIX’ ‘~/tmp/scratch/RtmpOTp5RG’   ‘~/tmp/scratch/RtmpOVINoY’ ‘~/tmp/scratch/RtmpOuTodc’   ‘~/tmp/scratch/RtmpOvqqnZ’ ‘~/tmp/scratch/RtmpP4SaHX’   ‘~/tmp/scratch/RtmpR9mkIM’ ‘~/tmp/scratch/RtmpRGMTKh’   ‘~/tmp/scratch/RtmpRXbcMZ’ ‘~/tmp/scratch/RtmpRz4iY4’   ‘~/tmp/scratch/RtmpSUoPKG’ ‘~/tmp/scratch/RtmpSe31HD’   ‘~/tmp/scratch/RtmpTWdrhg’ ‘~/tmp/scratch/RtmpTZpHlA’   ‘~/tmp/scratch/RtmpTbhvou’ ‘~/tmp/scratch/RtmpTlKYVR’   ‘~/tmp/scratch/RtmpTnR7UY’ ‘~/tmp/scratch/RtmpTwRjAK’   ‘~/tmp/scratch/RtmpU4dYr0’ ‘~/tmp/scratch/RtmpUFBauu’   ‘~/tmp/scratch/RtmpUIOUFD’ ‘~/tmp/scratch/RtmpUg1AM8’   ‘~/tmp/scratch/RtmpUkgXVx’ ‘~/tmp/scratch/RtmpVioTRv’   ‘~/tmp/scratch/RtmpW617pC’ ‘~/tmp/scratch/RtmpW64mUN’   ‘~/tmp/scratch/RtmpWsOM29’ ‘~/tmp/scratch/RtmpWv5BIA’   ‘~/tmp/scratch/RtmpX1WjOQ’ ‘~/tmp/scratch/RtmpXhqjS5’   ‘~/tmp/scratch/RtmpXqSmkC’ ‘~/tmp/scratch/RtmpYJUxgM’   ‘~/tmp/scratch/RtmpYLutZi’ ‘~/tmp/scratch/RtmpYSMeGQ’   ‘~/tmp/scratch/RtmpYi6MXW’ ‘~/tmp/scratch/RtmpYlbim7’   ‘~/tmp/scratch/RtmpYzzce4’ ‘~/tmp/scratch/RtmpZ3jyXF’   ‘~/tmp/scratch/RtmpZByN5e’ ‘~/tmp/scratch/RtmpZrJ4yh’   ‘~/tmp/scratch/RtmpaGAN29’ ‘~/tmp/scratch/RtmpaWBAiu’   ‘~/tmp/scratch/RtmpatUwXZ’ ‘~/tmp/scratch/RtmpbIVoF4’   ‘~/tmp/scratch/RtmpbLCAIn’ ‘~/tmp/scratch/RtmpbY9pne’   ‘~/tmp/scratch/RtmpbeNboJ’ ‘~/tmp/scratch/Rtmpbn1qhM’   ‘~/tmp/scratch/Rtmpc65w8J’ ‘~/tmp/scratch/RtmpctWF72’   ‘~/tmp/scratch/Rtmpd6SjBd’ ‘~/tmp/scratch/Rtmpe0igNF’   ‘~/tmp/scratch/Rtmpe3sXQa’ ‘~/tmp/scratch/Rtmpf4uiHP’   ‘~/tmp/scratch/RtmpfDqUBE’ ‘~/tmp/scratch/Rtmpg4izB3’   ‘~/tmp/scratch/RtmpgXmm9H’ ‘~/tmp/scratch/RtmpgZcq29’   ‘~/tmp/scratch/RtmpgiCpUc’ ‘~/tmp/scratch/RtmpgstFQp’   ‘~/tmp/scratch/Rtmph7JgyV’ ‘~/tmp/scratch/RtmphMlQTQ’   ‘~/tmp/scratch/RtmphrrmQ5’ ‘~/tmp/scratch/RtmphtaBB6’   ‘~/tmp/scratch/RtmpiZu7BT’ ‘~/tmp/scratch/Rtmpip27In’   ‘~/tmp/scratch/Rtmpjekd6X’ ‘~/tmp/scratch/RtmpkIYADX’   ‘~/tmp/scratch/RtmpkaxSpq’ ‘~/tmp/scratch/RtmpkmXGY6’   ‘~/tmp/scratch/Rtmpkmk08F’ ‘~/tmp/scratch/RtmpknT3R5’   ‘~/tmp/scratch/Rtmpl1fuSK’ ‘~/tmp/scratch/RtmplQZFjN’   ‘~/tmp/scratch/RtmplVRgqi’ ‘~/tmp/scratch/RtmplYzQ2k’   ‘~/tmp/scratch/RtmpleNDfs’ ‘~/tmp/scratch/RtmpliIxZr’   ‘~/tmp/scratch/RtmplpvGmv’ ‘~/tmp/scratch/RtmpmYx486’   ‘~/tmp/scratch/RtmpmZPE0D’ ‘~/tmp/scratch/RtmpnFJ2yu’   ‘~/tmp/scratch/RtmpnGkPcV’ ‘~/tmp/scratch/Rtmpo7I7lr’   ‘~/tmp/scratch/RtmpoCn17G’ ‘~/tmp/scratch/RtmpoPcFkv’   ‘~/tmp/scratch/RtmpolrC7x’ ‘~/tmp/scratch/RtmppL9U6j’   ‘~/tmp/scratch/RtmppM3vi8’ ‘~/tmp/scratch/RtmppQCSRe’   ‘~/tmp/scratch/RtmppwJuOh’ ‘~/tmp/scratch/RtmpqrIhe4’   ‘~/tmp/scratch/Rtmpr1ZqMp’ ‘~/tmp/scratch/Rtmpr5QAnL’   ‘~/tmp/scratch/RtmprSLrXk’ ‘~/tmp/scratch/Rtmps9t5JE’   ‘~/tmp/scratch/RtmpsK4dIz’ ‘~/tmp/scratch/Rtmpsa5i7t’   ‘~/tmp/scratch/Rtmpsh5y2b’ ‘~/tmp/scratch/RtmptFOYGM’   ‘~/tmp/scratch/RtmptVUfT7’ ‘~/tmp/scratch/RtmptkUIbs’   ‘~/tmp/scratch/RtmpvOwCh2’ ‘~/tmp/scratch/RtmpvSavnk’   ‘~/tmp/scratch/RtmpvafsMo’ ‘~/tmp/scratch/RtmpwLurXB’   ‘~/tmp/scratch/RtmpwRzitz’ ‘~/tmp/scratch/RtmpwvtrIm’   ‘~/tmp/scratch/RtmpxCXB5h’ ‘~/tmp/scratch/Rtmpy1utut’   ‘~/tmp/scratch/RtmpyEPf1Z’ ‘~/tmp/scratch/RtmpzAHpKt’   ‘~/tmp/scratch/cc1AG0JI.s’ ‘~/tmp/scratch/ccj6JS1m.s’   ‘~/tmp/scratch/xvfb-run.0qfQWX’ ‘~/tmp/scratch/xvfb-run.19duWg’   ‘~/tmp/scratch/xvfb-run.1bc2H7’ ‘~/tmp/scratch/xvfb-run.4B8d67’   ‘~/tmp/scratch/xvfb-run.5vJZJQ’ ‘~/tmp/scratch/xvfb-run.88BBia’   ‘~/tmp/scratch/xvfb-run.8KRenm’ ‘~/tmp/scratch/xvfb-run.9ehB2w’   ‘~/tmp/scratch/xvfb-run.ArAqYl’ ‘~/tmp/scratch/xvfb-run.CCdiz9’   ‘~/tmp/scratch/xvfb-run.CDdmZC’ ‘~/tmp/scratch/xvfb-run.ChiDUF’   ‘~/tmp/scratch/xvfb-run.CrBTOQ’ ‘~/tmp/scratch/xvfb-run.DOKYxY’   ‘~/tmp/scratch/xvfb-run.EQwnq9’ ‘~/tmp/scratch/xvfb-run.F9jTSs’   ‘~/tmp/scratch/xvfb-run.FHmSXy’ ‘~/tmp/scratch/xvfb-run.FN7HFc’   ‘~/tmp/scratch/xvfb-run.H64uzi’ ‘~/tmp/scratch/xvfb-run.HWKE1o’   ‘~/tmp/scratch/xvfb-run.IiroPR’ ‘~/tmp/scratch/xvfb-run.MJJD0Z’   ‘~/tmp/scratch/xvfb-run.Mkde5n’ ‘~/tmp/scratch/xvfb-run.NYaLTH’   ‘~/tmp/scratch/xvfb-run.Nssp8O’ ‘~/tmp/scratch/xvfb-run.PiJK1G’   ‘~/tmp/scratch/xvfb-run.Q8dFNU’ ‘~/tmp/scratch/xvfb-run.QQz32T’   ‘~/tmp/scratch/xvfb-run.SbYs8d’ ‘~/tmp/scratch/xvfb-run.SuqBBs’   ‘~/tmp/scratch/xvfb-run.SzM1qF’ ‘~/tmp/scratch/xvfb-run.Ti7sMu’   ‘~/tmp/scratch/xvfb-run.UDUudv’ ‘~/tmp/scratch/xvfb-run.UGd16X’   ‘~/tmp/scratch/xvfb-run.Uk0CNJ’ ‘~/tmp/scratch/xvfb-run.WtuPAE’   ‘~/tmp/scratch/xvfb-run.YBSZRz’ ‘~/tmp/scratch/xvfb-run.Z0j4ZN’   ‘~/tmp/scratch/xvfb-run.ZzRbM1’ ‘~/tmp/scratch/xvfb-run.bXZoRN’   ‘~/tmp/scratch/xvfb-run.cLLBN0’ ‘~/tmp/scratch/xvfb-run.dM19F4’   ‘~/tmp/scratch/xvfb-run.dNXOT0’ ‘~/tmp/scratch/xvfb-run.gIhTSM’   ‘~/tmp/scratch/xvfb-run.iamf47’ ‘~/tmp/scratch/xvfb-run.iao2DD’   ‘~/tmp/scratch/xvfb-run.icTlcP’ ‘~/tmp/scratch/xvfb-run.id2VHl’   ‘~/tmp/scratch/xvfb-run.idPpIK’ ‘~/tmp/scratch/xvfb-run.jTPkhy’   ‘~/tmp/scratch/xvfb-run.k1Yhzp’ ‘~/tmp/scratch/xvfb-run.kU2f9Q’   ‘~/tmp/scratch/xvfb-run.lAArV3’ ‘~/tmp/scratch/xvfb-run.lD1mhj’   ‘~/tmp/scratch/xvfb-run.lwW2AN’ ‘~/tmp/scratch/xvfb-run.mVHs3D’   ‘~/tmp/scratch/xvfb-run.nNYB93’ ‘~/tmp/scratch/xvfb-run.ntfT7X’   ‘~/tmp/scratch/xvfb-run.oaQtbB’ ‘~/tmp/scratch/xvfb-run.ojXiNj’   ‘~/tmp/scratch/xvfb-run.pn1sSF’ ‘~/tmp/scratch/xvfb-run.qTgaTh’   ‘~/tmp/scratch/xvfb-run.sBxDPN’ ‘~/tmp/scratch/xvfb-run.sOTeKp’   ‘~/tmp/scratch/xvfb-run.spIhnD’ ‘~/tmp/scratch/xvfb-run.tESfrT’   ‘~/tmp/scratch/xvfb-run.uEU9Gi’ ‘~/tmp/scratch/xvfb-run.uqWptB’   ‘~/tmp/scratch/xvfb-run.vixKzm’ ‘~/tmp/scratch/xvfb-run.wcywf3’   ‘~/tmp/scratch/xvfb-run.yG7lKC’ ‘~/tmp/scratch/xvfb-run.yXtOkN’   ‘~/tmp/scratch/xvfb-run.zNf4J8’ ‘~/tmp/scratch/xvfb-run.ztAPkY’   ‘~/tmp/scratch/xvfb-run.ztsAdI’
• DONE

Status: 2 NOTEs