• using R Under development (unstable) (2026-07-30 r90327)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-16 (Debian 16.1.0-3) 16.1.0     GNU Fortran (Debian 16.1.0-3) 16.1.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-07-31 12:28:05 UTC
• checking for file ‘PTXQC/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘PTXQC’ version ‘1.1.5’
• package encoding: UTF-8
• checking CRAN incoming feasibility ... [1s/2s] OK
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking serialization versions ... OK
• checking whether package ‘PTXQC’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [2s/2s] OK
• checking whether the package can be loaded with stated dependencies ... [2s/2s] OK
• checking whether the package can be unloaded cleanly ... [2s/2s] OK
• checking whether the namespace can be loaded with stated dependencies ... [2s/2s] OK
• checking whether the namespace can be unloaded cleanly ... [2s/2s] OK
• checking loading without being on the library search path ... [2s/2s] OK
• checking whether startup messages can be suppressed ... [2s/2s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [22s/27s] OK
• checking Rd files ... [1s/1s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... NOTE Rd files without \usage:   ‘MQDataReader-class.Rd’ ‘qcMetric-class.Rd’ \arguments should not be documented without \usage.
• checking for unstated dependencies in examples ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [15s/18s] OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [68s/76s] OK   Running ‘testthat.R’ [68s/75s]
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [8s/10s] OK
• checking PDF version of manual ... [6s/9s] OK
• checking HTML version of manual ... [2s/2s] OK
• checking for non-standard things in the check directory ... OK
• checking for new files in some other directories ... NOTE Found the following files/directories:   ‘~/tmp/scratch/Rtmp0H2mg9’ ‘~/tmp/scratch/Rtmp0cah3M’   ‘~/tmp/scratch/Rtmp0iaYCx’ ‘~/tmp/scratch/Rtmp0mofOT’   ‘~/tmp/scratch/Rtmp1GXOHV’ ‘~/tmp/scratch/Rtmp2a8Z2S’   ‘~/tmp/scratch/Rtmp37J8qC’ ‘~/tmp/scratch/Rtmp3kz31T’   ‘~/tmp/scratch/Rtmp3zY81F’ ‘~/tmp/scratch/Rtmp4ed3KZ’   ‘~/tmp/scratch/Rtmp56WdHk’ ‘~/tmp/scratch/Rtmp59kbOs’   ‘~/tmp/scratch/Rtmp5qdBZm’ ‘~/tmp/scratch/Rtmp5w1Mhb’   ‘~/tmp/scratch/Rtmp5wNkCj’ ‘~/tmp/scratch/Rtmp7iUenR’   ‘~/tmp/scratch/Rtmp7mJZL1’ ‘~/tmp/scratch/Rtmp8H03pv’   ‘~/tmp/scratch/Rtmp8VXrAr’ ‘~/tmp/scratch/Rtmp8eDMvk’   ‘~/tmp/scratch/Rtmp8gg4ET’ ‘~/tmp/scratch/Rtmp9VHvHM’   ‘~/tmp/scratch/Rtmp9Y3EMo’ ‘~/tmp/scratch/Rtmp9Y7Ek9’   ‘~/tmp/scratch/Rtmp9kCfi8’ ‘~/tmp/scratch/Rtmp9vaakw’   ‘~/tmp/scratch/RtmpA44G6A’ ‘~/tmp/scratch/RtmpAuQvL7’   ‘~/tmp/scratch/RtmpB0OKjx’ ‘~/tmp/scratch/RtmpB8by33’   ‘~/tmp/scratch/RtmpBrqQWt’ ‘~/tmp/scratch/RtmpBva45v’   ‘~/tmp/scratch/RtmpC8zqNX’ ‘~/tmp/scratch/RtmpCcM2VG’   ‘~/tmp/scratch/RtmpChXanx’ ‘~/tmp/scratch/RtmpCotN2J’   ‘~/tmp/scratch/RtmpCsifTA’ ‘~/tmp/scratch/RtmpDbMA9L’   ‘~/tmp/scratch/RtmpDgC51h’ ‘~/tmp/scratch/RtmpEVXpg2’   ‘~/tmp/scratch/RtmpF7QDXY’ ‘~/tmp/scratch/RtmpFQI9el’   ‘~/tmp/scratch/RtmpFX3aXn’ ‘~/tmp/scratch/RtmpFnVECS’   ‘~/tmp/scratch/RtmpG0z1Pr’ ‘~/tmp/scratch/RtmpGsKy38’   ‘~/tmp/scratch/RtmpI9Za8q’ ‘~/tmp/scratch/RtmpIQDao5’   ‘~/tmp/scratch/RtmpIop01I’ ‘~/tmp/scratch/RtmpIwGVOl’   ‘~/tmp/scratch/RtmpJ8Dsxd’ ‘~/tmp/scratch/RtmpJvCMgM’   ‘~/tmp/scratch/RtmpK50zFx’ ‘~/tmp/scratch/RtmpKOirPU’   ‘~/tmp/scratch/RtmpKhoYQK’ ‘~/tmp/scratch/RtmpKwXIMo’   ‘~/tmp/scratch/RtmpL2ilzz’ ‘~/tmp/scratch/RtmpLFsHMt’   ‘~/tmp/scratch/RtmpLh7pSf’ ‘~/tmp/scratch/RtmpLhS5mx’   ‘~/tmp/scratch/RtmpLso6sE’ ‘~/tmp/scratch/RtmpNmbBWo’   ‘~/tmp/scratch/RtmpOXljbX’ ‘~/tmp/scratch/RtmpPb5p20’   ‘~/tmp/scratch/RtmpPlfp20’ ‘~/tmp/scratch/RtmpQgMpqt’   ‘~/tmp/scratch/RtmpRiEfba’ ‘~/tmp/scratch/RtmpRjiMax’   ‘~/tmp/scratch/RtmpRkuPRW’ ‘~/tmp/scratch/RtmpRqYyoi’   ‘~/tmp/scratch/RtmpSVoVae’ ‘~/tmp/scratch/RtmpSgdsUS’   ‘~/tmp/scratch/RtmpSvFmW7’ ‘~/tmp/scratch/RtmpSxCZ0h’   ‘~/tmp/scratch/RtmpT72Ac2’ ‘~/tmp/scratch/RtmpUak49o’   ‘~/tmp/scratch/RtmpUfEvMY’ ‘~/tmp/scratch/RtmpUosSL3’   ‘~/tmp/scratch/RtmpVboC8R’ ‘~/tmp/scratch/RtmpWLUMp7’   ‘~/tmp/scratch/RtmpWNpuPI’ ‘~/tmp/scratch/RtmpWxX2NR’   ‘~/tmp/scratch/RtmpX0S18Q’ ‘~/tmp/scratch/RtmpX1ZIwj’   ‘~/tmp/scratch/RtmpXDIxjL’ ‘~/tmp/scratch/RtmpXJCOQH’   ‘~/tmp/scratch/RtmpYYdXeK’ ‘~/tmp/scratch/RtmpZIWymc’   ‘~/tmp/scratch/RtmpaMJ4YX’ ‘~/tmp/scratch/RtmpbOZxY8’   ‘~/tmp/scratch/RtmpbcUEf6’ ‘~/tmp/scratch/RtmpbgBAoo’   ‘~/tmp/scratch/RtmpbpRG7q’ ‘~/tmp/scratch/RtmpcQtf98’   ‘~/tmp/scratch/Rtmpcpag0Z’ ‘~/tmp/scratch/Rtmpe4wEHh’   ‘~/tmp/scratch/RtmpeC8SQz’ ‘~/tmp/scratch/RtmpeVErHz’   ‘~/tmp/scratch/RtmpeWQwk8’ ‘~/tmp/scratch/RtmpeWeRET’   ‘~/tmp/scratch/Rtmpei69Q8’ ‘~/tmp/scratch/RtmpfFGHNw’   ‘~/tmp/scratch/Rtmpficp7C’ ‘~/tmp/scratch/RtmpfnlaO8’   ‘~/tmp/scratch/RtmpfzQWyC’ ‘~/tmp/scratch/Rtmpg8ZX64’   ‘~/tmp/scratch/RtmpgC0hIr’ ‘~/tmp/scratch/RtmpgfNhKb’   ‘~/tmp/scratch/RtmphQroWl’ ‘~/tmp/scratch/Rtmphf3dlR’   ‘~/tmp/scratch/RtmphiabLD’ ‘~/tmp/scratch/RtmphqJefm’   ‘~/tmp/scratch/RtmphyWx4o’ ‘~/tmp/scratch/Rtmpi8fLSk’   ‘~/tmp/scratch/RtmpiOOWoo’ ‘~/tmp/scratch/RtmpiUZKAL’   ‘~/tmp/scratch/RtmpiuyAHu’ ‘~/tmp/scratch/Rtmpj7csRF’   ‘~/tmp/scratch/RtmpjObySQ’ ‘~/tmp/scratch/RtmpjmDN91’   ‘~/tmp/scratch/RtmpkUBS7l’ ‘~/tmp/scratch/Rtmpki7Giw’   ‘~/tmp/scratch/RtmplDn35y’ ‘~/tmp/scratch/RtmplsooYP’   ‘~/tmp/scratch/RtmpmD7ehS’ ‘~/tmp/scratch/Rtmpmu23pE’   ‘~/tmp/scratch/RtmpnT9k3d’ ‘~/tmp/scratch/RtmpnYnEDF’   ‘~/tmp/scratch/Rtmpo3MbTP’ ‘~/tmp/scratch/RtmpogIBnz’   ‘~/tmp/scratch/RtmpondoHw’ ‘~/tmp/scratch/RtmpoyLoA4’   ‘~/tmp/scratch/Rtmpp3grQ4’ ‘~/tmp/scratch/RtmppglpJ7’   ‘~/tmp/scratch/Rtmppncg6x’ ‘~/tmp/scratch/Rtmpq0olbI’   ‘~/tmp/scratch/RtmpqfI4hF’ ‘~/tmp/scratch/RtmpryBmbg’   ‘~/tmp/scratch/Rtmpsb0r1N’ ‘~/tmp/scratch/RtmptEDDbR’   ‘~/tmp/scratch/RtmptTfkqN’ ‘~/tmp/scratch/Rtmptbe6eF’   ‘~/tmp/scratch/RtmptkBhPF’ ‘~/tmp/scratch/RtmptuOJ3O’   ‘~/tmp/scratch/RtmpuGqYsD’ ‘~/tmp/scratch/RtmpuLb9xo’   ‘~/tmp/scratch/RtmpuVam3l’ ‘~/tmp/scratch/Rtmpvn0oMw’   ‘~/tmp/scratch/RtmpvtM7KR’ ‘~/tmp/scratch/RtmpwMtQbX’   ‘~/tmp/scratch/RtmpwcIJ4r’ ‘~/tmp/scratch/Rtmpwq0Tvi’   ‘~/tmp/scratch/RtmpxGPpU6’ ‘~/tmp/scratch/RtmpxGS7NO’   ‘~/tmp/scratch/RtmpxMPlEc’ ‘~/tmp/scratch/RtmpxMl6Zi’   ‘~/tmp/scratch/RtmpyAzWQP’ ‘~/tmp/scratch/RtmpzfwBLh’   ‘~/tmp/scratch/Rtmpzv6fcG’ ‘~/tmp/scratch/cc2G4z76.s’   ‘~/tmp/scratch/xvfb-run.0S7vYu’ ‘~/tmp/scratch/xvfb-run.15CmZP’   ‘~/tmp/scratch/xvfb-run.29Miqp’ ‘~/tmp/scratch/xvfb-run.3tJNlj’   ‘~/tmp/scratch/xvfb-run.5eyrtZ’ ‘~/tmp/scratch/xvfb-run.7yTm81’   ‘~/tmp/scratch/xvfb-run.8PKuGV’ ‘~/tmp/scratch/xvfb-run.8UesAR’   ‘~/tmp/scratch/xvfb-run.8WnTzw’ ‘~/tmp/scratch/xvfb-run.9jWmy1’   ‘~/tmp/scratch/xvfb-run.A89WRC’ ‘~/tmp/scratch/xvfb-run.AZEhbs’   ‘~/tmp/scratch/xvfb-run.AeoYkJ’ ‘~/tmp/scratch/xvfb-run.ApPwhv’   ‘~/tmp/scratch/xvfb-run.BLvpXS’ ‘~/tmp/scratch/xvfb-run.DGPQIw’   ‘~/tmp/scratch/xvfb-run.DUY7Ma’ ‘~/tmp/scratch/xvfb-run.EVWXQp’   ‘~/tmp/scratch/xvfb-run.EqqP7x’ ‘~/tmp/scratch/xvfb-run.Frqkpe’   ‘~/tmp/scratch/xvfb-run.HnJ4Ox’ ‘~/tmp/scratch/xvfb-run.HxOCDK’   ‘~/tmp/scratch/xvfb-run.IcVN4j’ ‘~/tmp/scratch/xvfb-run.J3KYuk’   ‘~/tmp/scratch/xvfb-run.Jm9FeN’ ‘~/tmp/scratch/xvfb-run.KQOfKF’   ‘~/tmp/scratch/xvfb-run.KiD6GM’ ‘~/tmp/scratch/xvfb-run.LV10ab’   ‘~/tmp/scratch/xvfb-run.Lu182o’ ‘~/tmp/scratch/xvfb-run.Medsar’   ‘~/tmp/scratch/xvfb-run.MjkTTM’ ‘~/tmp/scratch/xvfb-run.NCT7aF’   ‘~/tmp/scratch/xvfb-run.NqRWgf’ ‘~/tmp/scratch/xvfb-run.O4z1Hb’   ‘~/tmp/scratch/xvfb-run.U5xfhl’ ‘~/tmp/scratch/xvfb-run.UXK49Z’   ‘~/tmp/scratch/xvfb-run.UYMSEe’ ‘~/tmp/scratch/xvfb-run.Vk2IYZ’   ‘~/tmp/scratch/xvfb-run.XHu13r’ ‘~/tmp/scratch/xvfb-run.XOftk7’   ‘~/tmp/scratch/xvfb-run.XrTh5H’ ‘~/tmp/scratch/xvfb-run.Y91upf’   ‘~/tmp/scratch/xvfb-run.Ybfp2B’ ‘~/tmp/scratch/xvfb-run.afMgQN’   ‘~/tmp/scratch/xvfb-run.c9e0bC’ ‘~/tmp/scratch/xvfb-run.cSgfV2’   ‘~/tmp/scratch/xvfb-run.cdO9mR’ ‘~/tmp/scratch/xvfb-run.cmpAWU’   ‘~/tmp/scratch/xvfb-run.ePjzWd’ ‘~/tmp/scratch/xvfb-run.fOxdAP’   ‘~/tmp/scratch/xvfb-run.fmjjEB’ ‘~/tmp/scratch/xvfb-run.gozw5Y’   ‘~/tmp/scratch/xvfb-run.j7zahO’ ‘~/tmp/scratch/xvfb-run.j8jqYv’   ‘~/tmp/scratch/xvfb-run.jA890b’ ‘~/tmp/scratch/xvfb-run.knPTpT’   ‘~/tmp/scratch/xvfb-run.l2yMjR’ ‘~/tmp/scratch/xvfb-run.lpJ1iS’   ‘~/tmp/scratch/xvfb-run.lxOnA1’ ‘~/tmp/scratch/xvfb-run.mBojLQ’   ‘~/tmp/scratch/xvfb-run.mLf9b2’ ‘~/tmp/scratch/xvfb-run.mO30Uo’   ‘~/tmp/scratch/xvfb-run.oBhViX’ ‘~/tmp/scratch/xvfb-run.rN9nQU’   ‘~/tmp/scratch/xvfb-run.rUS9qM’ ‘~/tmp/scratch/xvfb-run.vhfCtH’   ‘~/tmp/scratch/xvfb-run.vmPMVS’ ‘~/tmp/scratch/xvfb-run.wB9Dk1’   ‘~/tmp/scratch/xvfb-run.xiaeoZ’ ‘~/tmp/scratch/xvfb-run.yBpzPX’   ‘~/tmp/scratch/xvfb-run.zmzwQW’
• DONE

Status: 2 NOTEs