* installing to library ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages’
* installing *source* package ‘PSPI’ ...
** this is package ‘PSPI’ version ‘1.4’
** package ‘PSPI’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-16 (Debian 16.2.0-3) 16.2.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpDSeGuP/R.INSTALL35aca4ddaa4b4/PSPI/src'
g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include -I../inst/include/ -I/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include/Rcpp -I/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include/RcppArmadillo -I/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include/RcppDist -I/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include/RcppProgress -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppDist/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppProgress/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/pg/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c MCMC_PSPI.cpp -o MCMC_PSPI.o
In file included from bart_model.h:17,
from BARTforPSPI.h:16,
from MCMC_PSPI.cpp:9:
BART/bartfuns.h: In function ‘double getpb(tree&, xinfo&, pinfo&, tree::npv&)’:
BART/bartfuns.h:75:3: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation]
75 | for(size_t i=0;i!=bnv.size();i++)
| ^~~
BART/bartfuns.h:77:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’
77 | if(goodbots.size()==0) { //are there any bottom nodes you can split on?
| ^~
In file included from bart_model.h:18:
BART/bd.h: In function ‘double getpb_bd(tree&, xinfo&, pinfo&, tree::npv&)’:
BART/bd.h:294:3: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation]
294 | for(size_t i=0;i!=bnv.size();i++)
| ^~~
BART/bd.h:296:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’
296 | if(goodbots.size()==0) { //are there any bottom nodes you can split on?
| ^~
In file included from bart_model.h:19:
BART/bart.h: In member function ‘void bart::makexinfo_bart(size_t, size_t, double*, xinfo&, int*)’:
BART/bart.h:101:24: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
101 | for(size_t j=0;j<nc[i];j++) xi[i][j] = minx[i] + (j+1)*xinc;
| ~^~~~~~
bart_model.h: In constructor ‘bart_model::bart_model(Rcpp::NumericMatrix, Rcpp::NumericVector, bool, bool, long int, bool, bool, bool, int, Rcpp::Nullable<double>, double, double, double, double)’:
bart_model.h:144:23: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare]
144 | for(size_t i=0;i<p;i++) {
| ~^~
bart_model.h: In member function ‘Rcpp::List bart_model::update(double, long int, long int, int, bool, long int)’:
bart_model.h:312:22: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare]
312 | for(size_t k=0; k<n; k++) {
| ~^~
bart_model.h:319:24: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare]
319 | for(size_t k=0; k<n; k++) trmean[k] += bm.f(k);
| ~^~
bart_model.h:325:26: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare]
325 | for(size_t j=0; j<ntrees; j++) {
| ~^~~~~~~
bart_model.h:333:26: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare]
333 | for(size_t j=0; j<p; j++){
| ~^~
bart_model.h:347:20: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare]
347 | for(size_t k=0; k<n; k++) trmean[k] /= npost;
| ~^~
bart_model.h:298:10: warning: variable ‘treedrawscnt’ set but not used [-Wunused-but-set-variable=]
298 | size_t treedrawscnt=0;
| ^~~~~~~~~~~~
bart_model.h: In member function ‘Rcpp::List bart_model::update(double, Rcpp::NumericVector, long int, long int, int, bool, long int)’:
bart_model.h:389:20: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare]
389 | for(size_t i=0; i<n; i++) svec[i] = w[i] * sigma;
| ~^~
bart_model.h:419:24: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare]
419 | for(size_t k=0; k<n; k++) trmean[k] += bm.f(k);
| ~^~
bart_model.h:425:26: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare]
425 | for(size_t j=0; j<ntrees; j++) {
| ~^~~~~~~
bart_model.h:433:26: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare]
433 | for(size_t j=0; j<p; j++){
| ~^~
bart_model.h:448:20: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare]
448 | for(size_t k=0; k<n; k++) trmean[k] /= npost;
| ~^~
bart_model.h:405:10: warning: variable ‘treedrawscnt’ set but not used [-Wunused-but-set-variable=]
405 | size_t treedrawscnt=0;
| ^~~~~~~~~~~~
BARTforPSPI.h: In member function ‘Rcpp::List BARTforPSPI::get_var_split()’:
BARTforPSPI.h:200:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<bart_model*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
200 | for(int j = 0 ; j < bart.size(); ++j){
| ~~^~~~~~~~~~~~~
MCMC_PSPI.cpp: In function ‘Rcpp::List MCMC_PSPI_generalizability(Rcpp::NumericMatrix, Rcpp::NumericVector, bool, Rcpp::IntegerVector, Rcpp::NumericMatrix, Rcpp::NumericMatrix, Rcpp::NumericMatrix, int, long int, long int, Rcpp::IntegerVector, Rcpp::IntegerVector, int, bool, bool, bool)’:
MCMC_PSPI.cpp:69:8: warning: unused variable ‘n’ [-Wunused-variable]
69 | long n = X_test_.nrow();
| ^
MCMC_PSPI.cpp:117:45: warning: ‘cmodel’ may be used uninitialized [-Wmaybe-uninitialized]
117 | if(i==(nburn/2)&&dart) cmodel->startdart();
| ~~~~~~~~~~~~~~~~~^~
MCMC_PSPI.cpp:39:17: note: ‘cmodel’ was declared here
39 | BARTforPSPI * cmodel;
| ^~~~~~
g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include -I../inst/include/ -I/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include/Rcpp -I/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include/RcppArmadillo -I/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include/RcppDist -I/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include/RcppProgress -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppDist/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppProgress/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/pg/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o
g++-16 -std=gnu++20 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o PSPI.so MCMC_PSPI.o RcppExports.o -llapack -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lRblas -lgfortran -lm -latomic_asneeded -lquadmath -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpDSeGuP/R.INSTALL35aca4ddaa4b4/PSPI/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpDSeGuP/R.INSTALL35aca4ddaa4b4/PSPI/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpDSeGuP/R.INSTALL35aca4ddaa4b4/PSPI/src'
installing to /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/00LOCK-PSPI/00new/PSPI/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (PSPI)