• using R Under development (unstable) (2026-07-30 r90327)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-16 (Debian 16.1.0-3) 16.1.0     GNU Fortran (Debian 16.1.0-3) 16.1.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-07-31 12:25:40 UTC
• checking for file ‘PHEindicatormethods/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘PHEindicatormethods’ version ‘2.1.1’
• package encoding: UTF-8
• checking CRAN incoming feasibility ... [2s/2s] OK
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘PHEindicatormethods’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [1s/1s] OK
• checking whether the package can be loaded with stated dependencies ... [0s/1s] OK
• checking whether the package can be unloaded cleanly ... [1s/1s] OK
• checking whether the namespace can be loaded with stated dependencies ... [1s/1s] OK
• checking whether the namespace can be unloaded cleanly ... [1s/1s] OK
• checking loading without being on the library search path ... [1s/1s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [10s/14s] OK
• checking Rd files ... [0s/1s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [0s/0s] OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking R/sysdata.rda ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [7s/8s] OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [40s/49s] OK   Running ‘testthat.R’ [40s/49s]
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [57s/74s] OK
• checking PDF version of manual ... [6s/7s] OK
• checking HTML version of manual ... [1s/1s] OK
• checking for non-standard things in the check directory ... OK
• checking for new files in some other directories ... NOTE Found the following files/directories:   ‘~/tmp/scratch/Rtmp0H2mg9’ ‘~/tmp/scratch/Rtmp0HL67V’   ‘~/tmp/scratch/Rtmp0d303d’ ‘~/tmp/scratch/Rtmp0gjCDA’   ‘~/tmp/scratch/Rtmp1TQsy3’ ‘~/tmp/scratch/Rtmp1cX0lG’   ‘~/tmp/scratch/Rtmp1h4mOL’ ‘~/tmp/scratch/Rtmp1oYrJE’   ‘~/tmp/scratch/Rtmp28Msc6’ ‘~/tmp/scratch/Rtmp2EelCM’   ‘~/tmp/scratch/Rtmp2d4Gjq’ ‘~/tmp/scratch/Rtmp2rPTN0’   ‘~/tmp/scratch/Rtmp3GCxDJ’ ‘~/tmp/scratch/Rtmp41BMBY’   ‘~/tmp/scratch/Rtmp4QqKdE’ ‘~/tmp/scratch/Rtmp4RZ7Za’   ‘~/tmp/scratch/Rtmp4b9lvH’ ‘~/tmp/scratch/Rtmp4ux0DX’   ‘~/tmp/scratch/Rtmp51kwBu’ ‘~/tmp/scratch/Rtmp5RMRqf’   ‘~/tmp/scratch/Rtmp5ePFZD’ ‘~/tmp/scratch/Rtmp6EYkhc’   ‘~/tmp/scratch/Rtmp6TAVFg’ ‘~/tmp/scratch/Rtmp6e2LSR’   ‘~/tmp/scratch/Rtmp78ZQno’ ‘~/tmp/scratch/Rtmp7J7Ow6’   ‘~/tmp/scratch/Rtmp7icW7f’ ‘~/tmp/scratch/Rtmp7tihjP’   ‘~/tmp/scratch/Rtmp89BUN4’ ‘~/tmp/scratch/Rtmp8NcVhk’   ‘~/tmp/scratch/Rtmp8Wnrmb’ ‘~/tmp/scratch/Rtmp8tFnD6’   ‘~/tmp/scratch/Rtmp8tOx8n’ ‘~/tmp/scratch/Rtmp9siK46’   ‘~/tmp/scratch/Rtmp9z6DXp’ ‘~/tmp/scratch/RtmpACysSJ’   ‘~/tmp/scratch/RtmpAZmTH1’ ‘~/tmp/scratch/RtmpArogbV’   ‘~/tmp/scratch/RtmpB6Nj12’ ‘~/tmp/scratch/RtmpB7nEVQ’   ‘~/tmp/scratch/RtmpBb4TbJ’ ‘~/tmp/scratch/RtmpBofF4u’   ‘~/tmp/scratch/RtmpCGjFyU’ ‘~/tmp/scratch/RtmpD2h3OV’   ‘~/tmp/scratch/RtmpDm9bBL’ ‘~/tmp/scratch/RtmpE1XtAp’   ‘~/tmp/scratch/RtmpEjDTvZ’ ‘~/tmp/scratch/RtmpFMDoqS’   ‘~/tmp/scratch/RtmpFUbi70’ ‘~/tmp/scratch/RtmpFgRHyA’   ‘~/tmp/scratch/RtmpHAnY0V’ ‘~/tmp/scratch/RtmpHHpAOx’   ‘~/tmp/scratch/RtmpHR6kuW’ ‘~/tmp/scratch/RtmpHszyGw’   ‘~/tmp/scratch/RtmpI5NlVC’ ‘~/tmp/scratch/RtmpIiAHI0’   ‘~/tmp/scratch/RtmpJ1HgKq’ ‘~/tmp/scratch/RtmpJ4PGPz’   ‘~/tmp/scratch/RtmpJI948Z’ ‘~/tmp/scratch/RtmpK26nQH’   ‘~/tmp/scratch/RtmpKNDN9u’ ‘~/tmp/scratch/RtmpKt4LE3’   ‘~/tmp/scratch/RtmpLUMwv9’ ‘~/tmp/scratch/RtmpLXO8RG’   ‘~/tmp/scratch/RtmpLyxPYb’ ‘~/tmp/scratch/RtmpMxTJXX’   ‘~/tmp/scratch/RtmpO7UJ1E’ ‘~/tmp/scratch/RtmpOtk9U7’   ‘~/tmp/scratch/RtmpOzMGBp’ ‘~/tmp/scratch/RtmpPLfI2s’   ‘~/tmp/scratch/RtmpPxpZpR’ ‘~/tmp/scratch/RtmpQXEpk4’   ‘~/tmp/scratch/RtmpR0md79’ ‘~/tmp/scratch/RtmpR5GxKm’   ‘~/tmp/scratch/RtmpRIJizD’ ‘~/tmp/scratch/RtmpRcET8g’   ‘~/tmp/scratch/RtmpRmBA4Q’ ‘~/tmp/scratch/RtmpRwuR7H’   ‘~/tmp/scratch/RtmpSDdZPh’ ‘~/tmp/scratch/RtmpSmGVkJ’   ‘~/tmp/scratch/RtmpTb6iWb’ ‘~/tmp/scratch/RtmpTvpvVC’   ‘~/tmp/scratch/RtmpTwgeHa’ ‘~/tmp/scratch/RtmpUJV49u’   ‘~/tmp/scratch/RtmpUadibc’ ‘~/tmp/scratch/RtmpUfEvMY’   ‘~/tmp/scratch/RtmpUtyUzI’ ‘~/tmp/scratch/RtmpV2h5i1’   ‘~/tmp/scratch/RtmpVA1bnX’ ‘~/tmp/scratch/RtmpVFrKun’   ‘~/tmp/scratch/RtmpVJz0Ys’ ‘~/tmp/scratch/RtmpVSQAAj’   ‘~/tmp/scratch/RtmpVWsBNf’ ‘~/tmp/scratch/RtmpVurbER’   ‘~/tmp/scratch/RtmpWh974f’ ‘~/tmp/scratch/RtmpWnHGFu’   ‘~/tmp/scratch/RtmpXKFPoj’ ‘~/tmp/scratch/RtmpXSDcdM’   ‘~/tmp/scratch/RtmpXj1FJl’ ‘~/tmp/scratch/RtmpXqx8Ir’   ‘~/tmp/scratch/RtmpYKE1f5’ ‘~/tmp/scratch/RtmpYgzxFk’   ‘~/tmp/scratch/RtmpZzIv5I’ ‘~/tmp/scratch/RtmpaGBr3b’   ‘~/tmp/scratch/RtmpaSrjjS’ ‘~/tmp/scratch/RtmpaUWRnw’   ‘~/tmp/scratch/RtmpaYMMbU’ ‘~/tmp/scratch/RtmpawTJpv’   ‘~/tmp/scratch/Rtmpb3gCsz’ ‘~/tmp/scratch/Rtmpb7urqK’   ‘~/tmp/scratch/RtmpbKEojb’ ‘~/tmp/scratch/RtmpcOzH4h’   ‘~/tmp/scratch/RtmpcZZWTu’ ‘~/tmp/scratch/RtmpcdrmNU’   ‘~/tmp/scratch/Rtmpd6saMe’ ‘~/tmp/scratch/RtmpdtaNpZ’   ‘~/tmp/scratch/RtmpfAoEdf’ ‘~/tmp/scratch/RtmpfJVxF4’   ‘~/tmp/scratch/RtmpfXo3Gm’ ‘~/tmp/scratch/RtmpfsXVzk’   ‘~/tmp/scratch/Rtmpg1KdWE’ ‘~/tmp/scratch/RtmpgVCG7w’   ‘~/tmp/scratch/RtmpgloKgH’ ‘~/tmp/scratch/RtmphsuSUL’   ‘~/tmp/scratch/RtmphuGArx’ ‘~/tmp/scratch/RtmpiRYbVd’   ‘~/tmp/scratch/RtmpiXwZCE’ ‘~/tmp/scratch/RtmpiXyFyU’   ‘~/tmp/scratch/RtmpirDMrd’ ‘~/tmp/scratch/RtmpjZFSKU’   ‘~/tmp/scratch/RtmpkGxIM2’ ‘~/tmp/scratch/RtmpkQ8tkf’   ‘~/tmp/scratch/RtmplFVNE0’ ‘~/tmp/scratch/RtmpmRUlrB’   ‘~/tmp/scratch/RtmpmYQgTv’ ‘~/tmp/scratch/RtmpmZki12’   ‘~/tmp/scratch/Rtmpmau0zd’ ‘~/tmp/scratch/RtmpmhoHfM’   ‘~/tmp/scratch/RtmpnbJZpG’ ‘~/tmp/scratch/RtmpolEhDx’   ‘~/tmp/scratch/Rtmpov7Wlz’ ‘~/tmp/scratch/Rtmpp54NAZ’   ‘~/tmp/scratch/RtmppMP72D’ ‘~/tmp/scratch/Rtmppx4Zw9’   ‘~/tmp/scratch/RtmpqcEPt8’ ‘~/tmp/scratch/Rtmpr8T7ZW’   ‘~/tmp/scratch/RtmprMVv6o’ ‘~/tmp/scratch/RtmprNFfbI’   ‘~/tmp/scratch/Rtmps9XZO7’ ‘~/tmp/scratch/RtmpsNX4RQ’   ‘~/tmp/scratch/RtmpscfG1i’ ‘~/tmp/scratch/RtmptEOoZt’   ‘~/tmp/scratch/RtmptJhF9k’ ‘~/tmp/scratch/Rtmptyes3v’   ‘~/tmp/scratch/RtmpuEURGP’ ‘~/tmp/scratch/RtmpuXANrA’   ‘~/tmp/scratch/Rtmpv4malb’ ‘~/tmp/scratch/Rtmpv94Qjw’   ‘~/tmp/scratch/RtmpvAQCAk’ ‘~/tmp/scratch/RtmpvjbRH1’   ‘~/tmp/scratch/RtmpwE6MPV’ ‘~/tmp/scratch/Rtmpx2PEuV’   ‘~/tmp/scratch/RtmpxVTJ0M’ ‘~/tmp/scratch/RtmpxVthPE’   ‘~/tmp/scratch/Rtmpxa3XIX’ ‘~/tmp/scratch/RtmpxpoYiC’   ‘~/tmp/scratch/RtmpyqJhZp’ ‘~/tmp/scratch/RtmpzGBtm5’   ‘~/tmp/scratch/RtmpzqDuGW’ ‘~/tmp/scratch/ccYbA5ic.s’   ‘~/tmp/scratch/xvfb-run.0ObG0W’ ‘~/tmp/scratch/xvfb-run.0mIORY’   ‘~/tmp/scratch/xvfb-run.1taN2o’ ‘~/tmp/scratch/xvfb-run.3BZzTj’   ‘~/tmp/scratch/xvfb-run.3PqMc1’ ‘~/tmp/scratch/xvfb-run.3YcA5n’   ‘~/tmp/scratch/xvfb-run.5PYCZ7’ ‘~/tmp/scratch/xvfb-run.5WxKHt’   ‘~/tmp/scratch/xvfb-run.6xr7bE’ ‘~/tmp/scratch/xvfb-run.7ShtlG’   ‘~/tmp/scratch/xvfb-run.8KbtrY’ ‘~/tmp/scratch/xvfb-run.8MdNhS’   ‘~/tmp/scratch/xvfb-run.92aQ03’ ‘~/tmp/scratch/xvfb-run.9n25M6’   ‘~/tmp/scratch/xvfb-run.AGlk9H’ ‘~/tmp/scratch/xvfb-run.AIWV4o’   ‘~/tmp/scratch/xvfb-run.AurBd3’ ‘~/tmp/scratch/xvfb-run.DGtJM1’   ‘~/tmp/scratch/xvfb-run.DNiemz’ ‘~/tmp/scratch/xvfb-run.DYxfg4’   ‘~/tmp/scratch/xvfb-run.FzdvMs’ ‘~/tmp/scratch/xvfb-run.GDsJEa’   ‘~/tmp/scratch/xvfb-run.GW5pEd’ ‘~/tmp/scratch/xvfb-run.GlofNi’   ‘~/tmp/scratch/xvfb-run.GrGwZy’ ‘~/tmp/scratch/xvfb-run.IUV1bM’   ‘~/tmp/scratch/xvfb-run.Imzh6P’ ‘~/tmp/scratch/xvfb-run.KlMWaJ’   ‘~/tmp/scratch/xvfb-run.L1Nrcy’ ‘~/tmp/scratch/xvfb-run.LEDhF7’   ‘~/tmp/scratch/xvfb-run.Lfc0wT’ ‘~/tmp/scratch/xvfb-run.M19iqJ’   ‘~/tmp/scratch/xvfb-run.Nei8rQ’ ‘~/tmp/scratch/xvfb-run.NqzQ2Z’   ‘~/tmp/scratch/xvfb-run.O7STwn’ ‘~/tmp/scratch/xvfb-run.OYhBGy’   ‘~/tmp/scratch/xvfb-run.OcWq1D’ ‘~/tmp/scratch/xvfb-run.P7sUF6’   ‘~/tmp/scratch/xvfb-run.TJPm1y’ ‘~/tmp/scratch/xvfb-run.TXxgn3’   ‘~/tmp/scratch/xvfb-run.VBwfoM’ ‘~/tmp/scratch/xvfb-run.YJ5oTR’   ‘~/tmp/scratch/xvfb-run.YTCc18’ ‘~/tmp/scratch/xvfb-run.bdobXn’   ‘~/tmp/scratch/xvfb-run.brZ4Hv’ ‘~/tmp/scratch/xvfb-run.dujMGO’   ‘~/tmp/scratch/xvfb-run.eT1sHD’ ‘~/tmp/scratch/xvfb-run.fSzY7a’   ‘~/tmp/scratch/xvfb-run.fwFiuP’ ‘~/tmp/scratch/xvfb-run.gMs568’   ‘~/tmp/scratch/xvfb-run.j80G2O’ ‘~/tmp/scratch/xvfb-run.kQRNZU’   ‘~/tmp/scratch/xvfb-run.l4M91i’ ‘~/tmp/scratch/xvfb-run.lVQRTa’   ‘~/tmp/scratch/xvfb-run.my3Sf3’ ‘~/tmp/scratch/xvfb-run.pXzYJl’   ‘~/tmp/scratch/xvfb-run.pZg26F’ ‘~/tmp/scratch/xvfb-run.po8kBD’   ‘~/tmp/scratch/xvfb-run.psAN0R’ ‘~/tmp/scratch/xvfb-run.qS0Tu3’   ‘~/tmp/scratch/xvfb-run.qwSo5e’ ‘~/tmp/scratch/xvfb-run.reAbPG’   ‘~/tmp/scratch/xvfb-run.spFPXl’ ‘~/tmp/scratch/xvfb-run.svhY5i’   ‘~/tmp/scratch/xvfb-run.tlaQzC’ ‘~/tmp/scratch/xvfb-run.uA8D4K’   ‘~/tmp/scratch/xvfb-run.uZgK74’ ‘~/tmp/scratch/xvfb-run.vehPeT’   ‘~/tmp/scratch/xvfb-run.vhfCtH’ ‘~/tmp/scratch/xvfb-run.wDzkXd’   ‘~/tmp/scratch/xvfb-run.wQdsUJ’ ‘~/tmp/scratch/xvfb-run.x690Sv’   ‘~/tmp/scratch/xvfb-run.xO4Cux’ ‘~/tmp/scratch/xvfb-run.xYa7aM’   ‘~/tmp/scratch/xvfb-run.yfXEqu’ ‘~/tmp/scratch/xvfb-run.yqfoBR’   ‘~/tmp/scratch/xvfb-run.zLDaHS’
• DONE

Status: 1 NOTE