- using R Under development (unstable) (2026-07-30 r90327)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
gcc-16 (Debian 16.1.0-3) 16.1.0
GNU Fortran (Debian 16.1.0-3) 16.1.0
- running under: Debian GNU/Linux forky/sid
- using session charset: UTF-8
* current time: 2026-07-31 12:22:34 UTC
- checking for file ‘OpenSpecy/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘OpenSpecy’ version ‘1.5.3’
- package encoding: UTF-8
- checking CRAN incoming feasibility ... [2s/3s] NOTE
Maintainer: ‘Win Cowger <wincowger@gmail.com>’
Found the following (possibly) invalid URLs:
URL: https://app.gitter.im/#/room/#Open-Specy_community:gitter.im
From: README.md
Message: Invalid URL: '#' not allowed in fragment
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘OpenSpecy’ can be installed ... OK
See the install log for details.
- checking package directory ... OK
- checking for future file timestamps ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [3s/5s] OK
- checking whether the package can be loaded with stated dependencies ... [3s/4s] OK
- checking whether the package can be unloaded cleanly ... [3s/4s] OK
- checking whether the namespace can be loaded with stated dependencies ... [3s/5s] OK
- checking whether the namespace can be unloaded cleanly ... [3s/5s] OK
- checking loading without being on the library search path ... [3s/4s] OK
- checking whether startup messages can be suppressed ... [3s/4s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [18s/21s] OK
- checking Rd files ... [1s/1s] OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... [0s/1s] OK
- checking LazyData ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [8s/12s] OK
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [24s/39s] OK
Running ‘testthat.R’ [24s/39s]
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [6s/7s] OK
- checking PDF version of manual ... [7s/11s] OK
- checking HTML version of manual ... [2s/3s] OK
- checking for non-standard things in the check directory ... OK
- checking for new files in some other directories ... NOTE
Found the following files/directories:
‘~/tmp/scratch/Rtmp0GhWDU’ ‘~/tmp/scratch/Rtmp0bQ09U’
‘~/tmp/scratch/Rtmp0nbxvw’ ‘~/tmp/scratch/Rtmp0ouD9W’
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‘/dev/shm/sem.b05247a4-d765-41a3-a9f8-38c2f10ae94f_bigmemory_counter_mutex’
‘/dev/shm/sem.b37e6370-6cab-43f4-99bc-985e2e301e06_bigmemory_counter_mutex’
‘/dev/shm/sem.b4f9ad56-1d77-42e2-9320-c058a6f090cc_bigmemory_counter_mutex’
‘/dev/shm/sem.b8a441af-c248-4afa-aa10-43b6c12b5a22_bigmemory_counter_mutex’
‘/dev/shm/sem.bba65da9-93cc-4bce-868f-ab93bfde7cc1_bigmemory_counter_mutex’
‘/dev/shm/sem.ca124567-99f0-4c3e-8d7e-63198c3cfa54_bigmemory_counter_mutex’
‘/dev/shm/sem.d762f6a5-c3cb-47ed-b316-c2f3834617b5_bigmemory_counter_mutex’
‘/dev/shm/sem.d9529067-d4e6-48b5-9f09-5d59a44abcf7_bigmemory_counter_mutex’
‘/dev/shm/sem.df320380-cfbe-4d98-8fcc-d4f142da7257_bigmemory_counter_mutex’
‘/dev/shm/sem.ef1346f0-cbfd-4bdc-b837-c7a8bf0096b2_bigmemory_counter_mutex’
‘/dev/shm/sem.f217e120-e5fd-4498-a524-62660c9d9e9a_bigmemory_counter_mutex’
‘~/.cache/pocl/uncached/tempfile_8KO5Aw’
‘~/.cache/pocl/uncached/tempfile_H6PdIO’
‘~/.cache/pocl/uncached/tempfile_rkKz4r’
- DONE
Status: 2 NOTEs