• using R Under development (unstable) (2022-06-30 r82540)
• using platform: x86_64-pc-linux-gnu (64-bit)
• using session charset: UTF-8
• checking for file ‘OpenSpecy/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘OpenSpecy’ version ‘0.9.3’
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘OpenSpecy’ can be installed ... OK
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the namespace can be loaded with stated dependencies ... OK
• checking whether the namespace can be unloaded cleanly ... OK
• checking loading without being on the library search path ... OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [13s/21s] OK
• checking Rd files ... [1s/1s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [3s/6s] OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [5s/9s] ERROR
    Running ‘testthat.R’ [4s/9s]
  Running the tests in ‘tests/testthat.R’ failed.
  Complete output:
    > library(testthat)
    > library(OpenSpecy)
    >
    > test_check("OpenSpecy")
    [ FAIL 1 | WARN 0 | SKIP 4 | PASS 95 ]
    
    ══ Skipped tests ═══════════════════════════════════════════════════════════════
    • On CRAN (4)
    
    ══ Failed tests ════════════════════════════════════════════════════════════════
    ── Error (test-read_spec.R:60:3): read_jdx() gives expected output ─────────────
    Error in `gsub("([[:blank:]][$][$].*)$", "", hdr)`: input string 15 is invalid
    Backtrace:
         ▆
      1. ├─testthat::expect_match(...) at test-read_spec.R:60:2
      2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
      3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
      4. ├─testthat::capture_messages(suppressWarnings(jdx <- read_jdx(read_extdata("fitr_nitrocellulose.jdx"))))
      5. │ └─base::withCallingHandlers(...)
      6. ├─base::suppressWarnings(jdx <- read_jdx(read_extdata("fitr_nitrocellulose.jdx")))
      7. │ └─base::withCallingHandlers(...)
      8. └─OpenSpecy::read_jdx(read_extdata("fitr_nitrocellulose.jdx"))
      9. └─hyperSpec::read.jdx(file, ...)
     10. ├─utils::modifyList(...)
     11. │ └─base::stopifnot(is.list(x), is.list(val))
     12. └─hyperSpec:::.jdx.readhdr(jdx[hdrstart[s]:(datastart[s] - 1)])
     13. └─base::gsub("([[:blank:]][$][$].*)$", "", hdr)
    
    [ FAIL 1 | WARN 0 | SKIP 4 | PASS 95 ]
    Error: Test failures
    Execution halted
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes in ‘inst/doc’ ... OK
• checking re-building of vignette outputs ... [6s/11s] OK
• checking PDF version of manual ... OK
• checking for non-standard things in the check directory ... OK
• DONE

Status: 1 ERROR