• using R Under development (unstable) (2025-10-19 r88945)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-15 (Debian 15.2.0-4) 15.2.0     GNU Fortran (Debian 15.2.0-4) 15.2.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8
• checking for file ‘MetAlyzer/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘MetAlyzer’ version ‘1.1.0’
• package encoding: UTF-8
• checking CRAN incoming feasibility ... [1s/2s] OK
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘MetAlyzer’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [8s/10s] OK
• checking whether the package can be loaded with stated dependencies ... [7s/8s] OK
• checking whether the package can be unloaded cleanly ... [7s/8s] OK
• checking whether the namespace can be loaded with stated dependencies ... [8s/11s] OK
• checking whether the namespace can be unloaded cleanly ... [8s/11s] OK
• checking loading without being on the library search path ... [8s/10s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [38s/51s] OK
• checking Rd files ... [0s/1s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [62s/76s] OK Examples with CPU (user + system) or elapsed time > 5s                  user system elapsed plotly_scatter 6.097 0.023 7.339 calculate_cv 5.513 0.606 8.321 calculate_anova 4.491 0.053 5.880
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [153s/196s] OK
• checking PDF version of manual ... [5s/7s] OK
• checking HTML version of manual ... [1s/1s] NOTE Found the following HTML validation problems: aggregate_data.html:65:1 (aggregate_data.Rd:18): Warning: missing </ul> before </div> calc_anova.html:52:1 (calc_anova.Rd:12): Warning: missing </ul> before </div> data_imputation.html:58:1 (data_imputation.Rd:15): Warning: missing </ul> before </div> get_data_range.html:47:1 (get_data_range.Rd:10): Warning: missing </ul> before </div> open_file.html:47:1 (open_file.Rd:10): Warning: missing </ul> before </div> read_named_region.html:50:1 (read_named_region.Rd:12): Warning: missing </ul> before </div> read_quant_status.html:74:1 (read_quant_status.Rd:27): Warning: missing </ul> before </div> set_threshold.html:50:1 (set_threshold.Rd:12): Warning: missing </ul> before </div> slice_conc_values.html:55:1 (slice_conc_values.Rd:14): Warning: missing </ul> before </div> slice_meta_data.html:50:1 (slice_meta_data.Rd:12): Warning: missing </ul> before </div> slice_metabolites.html:51:1 (slice_metabolites.Rd:12): Warning: missing </ul> before </div> transform.html:51:1 (transform.Rd:12): Warning: missing </ul> before </div> unify_hex.html:47:1 (unify_hex.Rd:10): Warning: missing </ul> before </div> zero_imputation.html:55:1 (zero_imputation.Rd:14): Warning: missing </ul> before </div>
• checking for non-standard things in the check directory ... OK
• DONE

Status: 1 NOTE