• using R Under development (unstable) (2026-07-31 r90332)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-16 (Debian 16.1.0-3) 16.1.0     GNU Fortran (Debian 16.1.0-3) 16.1.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-08-01 12:07:07 UTC
• checking for file ‘MARSS/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘MARSS’ version ‘3.11.10’
• package encoding: UTF-8
• checking CRAN incoming feasibility ... [4s/5s] OK
• checking package namespace information ... OK
• checking package dependencies ... INFO Package suggested but not available for checking: ‘marssTMB’
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘MARSS’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [0s/1s] OK
• checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
• checking whether the package can be unloaded cleanly ... [0s/0s] OK
• checking whether the namespace can be loaded with stated dependencies ... [0s/1s] OK
• checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
• checking loading without being on the library search path ... [0s/0s] OK
• checking whether startup messages can be suppressed ... [0s/0s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [34s/43s] OK
• checking Rd files ... [1s/1s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... NOTE Rd files without \usage:   ‘MARSS_dfa.Rd’ \arguments should not be documented without \usage.
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [0s/1s] OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking R/sysdata.rda ... OK
• checking sizes of PDF files under ‘inst/doc’ ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [46s/53s] OK Examples with CPU (user + system) or elapsed time > 5s                      user system elapsed plot_marssResiduals 8.272 0.068 9.933 fitted_marssMLE 6.920 0.096 7.549 MARSS 4.381 0.218 5.406
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [46s/60s] OK
• checking PDF version of manual ... [11s/14s] OK
• checking HTML version of manual ... [5s/7s] OK
• checking for non-standard things in the check directory ... OK
• checking for new files in some other directories ... NOTE Found the following files/directories:   ‘~/tmp/scratch/Rtmp0dnWGw’ ‘~/tmp/scratch/Rtmp1DpyoG’   ‘~/tmp/scratch/Rtmp1IXlid’ ‘~/tmp/scratch/Rtmp1bS3nM’   ‘~/tmp/scratch/Rtmp1k6ZLm’ ‘~/tmp/scratch/Rtmp1saRGv’   ‘~/tmp/scratch/Rtmp2VJImG’ ‘~/tmp/scratch/Rtmp2mL0My’   ‘~/tmp/scratch/Rtmp2wAJBx’ ‘~/tmp/scratch/Rtmp31Lk6m’   ‘~/tmp/scratch/Rtmp3WifJA’ ‘~/tmp/scratch/Rtmp3gnXAL’   ‘~/tmp/scratch/Rtmp3iNQ63’ ‘~/tmp/scratch/Rtmp3p21ub’   ‘~/tmp/scratch/Rtmp43ifEQ’ ‘~/tmp/scratch/Rtmp4DlgCt’   ‘~/tmp/scratch/Rtmp4psBuV’ ‘~/tmp/scratch/Rtmp51N4BE’   ‘~/tmp/scratch/Rtmp5YnFAS’ ‘~/tmp/scratch/Rtmp5r08Zs’   ‘~/tmp/scratch/Rtmp71tQyz’ ‘~/tmp/scratch/Rtmp7FLTfs’   ‘~/tmp/scratch/Rtmp7Ww1cO’ ‘~/tmp/scratch/Rtmp7wqJGB’   ‘~/tmp/scratch/Rtmp86HIS5’ ‘~/tmp/scratch/Rtmp8INxKB’   ‘~/tmp/scratch/Rtmp8hZZwD’ ‘~/tmp/scratch/Rtmp8mFiXu’   ‘~/tmp/scratch/Rtmp8o2pXU’ ‘~/tmp/scratch/Rtmp9IVeBU’   ‘~/tmp/scratch/Rtmp9ov1CP’ ‘~/tmp/scratch/Rtmp9sNeja’   ‘~/tmp/scratch/Rtmp9t8QzI’ ‘~/tmp/scratch/RtmpAGfWRU’   ‘~/tmp/scratch/RtmpB2Vcxc’ ‘~/tmp/scratch/RtmpBHYotT’   ‘~/tmp/scratch/RtmpBMTt9g’ ‘~/tmp/scratch/RtmpBU55AG’   ‘~/tmp/scratch/RtmpBc0y5q’ ‘~/tmp/scratch/RtmpCBNlyc’   ‘~/tmp/scratch/RtmpD0of2z’ ‘~/tmp/scratch/RtmpD8p9QR’   ‘~/tmp/scratch/RtmpDpcFib’ ‘~/tmp/scratch/RtmpDstgbK’   ‘~/tmp/scratch/RtmpE6FL9q’ ‘~/tmp/scratch/RtmpEYzl5Y’   ‘~/tmp/scratch/RtmpEwBHlG’ ‘~/tmp/scratch/RtmpEwgqLJ’   ‘~/tmp/scratch/RtmpEyOGKW’ ‘~/tmp/scratch/RtmpFH9SFd’   ‘~/tmp/scratch/RtmpGNytms’ ‘~/tmp/scratch/RtmpGlHJ8s’   ‘~/tmp/scratch/RtmpHB8z8e’ ‘~/tmp/scratch/RtmpHCYOXD’   ‘~/tmp/scratch/RtmpHCoBz4’ ‘~/tmp/scratch/RtmpHsbkWc’   ‘~/tmp/scratch/RtmpIQwkXx’ ‘~/tmp/scratch/RtmpIUeR2I’   ‘~/tmp/scratch/RtmpJEmLfT’ ‘~/tmp/scratch/RtmpJGn1O6’   ‘~/tmp/scratch/RtmpJU12NG’ ‘~/tmp/scratch/RtmpJYTNPw’   ‘~/tmp/scratch/RtmpJpUmbx’ ‘~/tmp/scratch/RtmpJxS21N’   ‘~/tmp/scratch/RtmpKsYRpy’ ‘~/tmp/scratch/RtmpL2cAUA’   ‘~/tmp/scratch/RtmpLJoiCs’ ‘~/tmp/scratch/RtmpLKHCtx’   ‘~/tmp/scratch/RtmpLeT6bV’ ‘~/tmp/scratch/RtmpMCPnuX’   ‘~/tmp/scratch/RtmpNGoBvD’ ‘~/tmp/scratch/RtmpNROSby’   ‘~/tmp/scratch/RtmpNm3tzQ’ ‘~/tmp/scratch/RtmpOBk5RC’   ‘~/tmp/scratch/RtmpOJ8Hds’ ‘~/tmp/scratch/RtmpOhrOe8’   ‘~/tmp/scratch/RtmpPDOIDl’ ‘~/tmp/scratch/RtmpPDrqog’   ‘~/tmp/scratch/RtmpQ42AG5’ ‘~/tmp/scratch/RtmpQZOkbv’   ‘~/tmp/scratch/RtmpQqT0fh’ ‘~/tmp/scratch/RtmpRxDDCC’   ‘~/tmp/scratch/RtmpTFPdEo’ ‘~/tmp/scratch/RtmpTGQXp3’   ‘~/tmp/scratch/RtmpTmgpH1’ ‘~/tmp/scratch/RtmpUeGmQd’   ‘~/tmp/scratch/RtmpVO7t75’ ‘~/tmp/scratch/RtmpWVTLhI’   ‘~/tmp/scratch/RtmpX4fdJ9’ ‘~/tmp/scratch/RtmpX7y6DO’   ‘~/tmp/scratch/RtmpYeldBd’ ‘~/tmp/scratch/RtmpYmADBp’   ‘~/tmp/scratch/RtmpZ8vPUx’ ‘~/tmp/scratch/RtmpZFdfGJ’   ‘~/tmp/scratch/RtmpZWqTUz’ ‘~/tmp/scratch/RtmpaC1Veg’   ‘~/tmp/scratch/RtmpaJ0qDR’ ‘~/tmp/scratch/RtmpaTWe19’   ‘~/tmp/scratch/RtmpaWyDRK’ ‘~/tmp/scratch/RtmpbfTXX6’   ‘~/tmp/scratch/RtmpbyR6Dw’ ‘~/tmp/scratch/RtmpcHti51’   ‘~/tmp/scratch/RtmpcOzHhx’ ‘~/tmp/scratch/RtmpcUDlCB’   ‘~/tmp/scratch/RtmpcUghzt’ ‘~/tmp/scratch/RtmpcfJQQL’   ‘~/tmp/scratch/RtmpciyJ3N’ ‘~/tmp/scratch/RtmpdFC4YY’   ‘~/tmp/scratch/RtmpdS2akj’ ‘~/tmp/scratch/RtmpdSqaYv’   ‘~/tmp/scratch/RtmpdcshtQ’ ‘~/tmp/scratch/RtmpdgSkvt’   ‘~/tmp/scratch/Rtmpdvy9wx’ ‘~/tmp/scratch/RtmpeP0agO’   ‘~/tmp/scratch/RtmpeT3tSL’ ‘~/tmp/scratch/RtmpfUsnYf’   ‘~/tmp/scratch/RtmpfZHce5’ ‘~/tmp/scratch/RtmpfgMOME’   ‘~/tmp/scratch/RtmpfnbQ3H’ ‘~/tmp/scratch/RtmpgkXT6T’   ‘~/tmp/scratch/RtmphKdHlu’ ‘~/tmp/scratch/RtmphNlMUd’   ‘~/tmp/scratch/RtmpiB2yWW’ ‘~/tmp/scratch/RtmpipYBVm’   ‘~/tmp/scratch/Rtmpj2P2FD’ ‘~/tmp/scratch/RtmpjHpw7l’   ‘~/tmp/scratch/Rtmpk2b4Gi’ ‘~/tmp/scratch/RtmpkBsHez’   ‘~/tmp/scratch/Rtmpku6oaG’ ‘~/tmp/scratch/Rtmpl696km’   ‘~/tmp/scratch/RtmpnVvTOO’ ‘~/tmp/scratch/Rtmpo7g4aW’   ‘~/tmp/scratch/RtmpoQN39M’ ‘~/tmp/scratch/Rtmpp6yWBe’   ‘~/tmp/scratch/RtmppyNEku’ ‘~/tmp/scratch/RtmpqTRkqN’   ‘~/tmp/scratch/RtmprMZO5B’ ‘~/tmp/scratch/Rtmprpz7tS’   ‘~/tmp/scratch/RtmpryOHmP’ ‘~/tmp/scratch/Rtmps43YfM’   ‘~/tmp/scratch/RtmpsMYPic’ ‘~/tmp/scratch/RtmpsfAwVX’   ‘~/tmp/scratch/RtmpstdCWX’ ‘~/tmp/scratch/Rtmpszx7hh’   ‘~/tmp/scratch/RtmptsnpMt’ ‘~/tmp/scratch/Rtmpu8hqFq’   ‘~/tmp/scratch/RtmpuZYHcD’ ‘~/tmp/scratch/RtmpunHJNm’   ‘~/tmp/scratch/Rtmpv5ar6X’ ‘~/tmp/scratch/Rtmpw0nh3h’   ‘~/tmp/scratch/Rtmpw6XK30’ ‘~/tmp/scratch/RtmpwIDW2h’   ‘~/tmp/scratch/RtmpwM2KMI’ ‘~/tmp/scratch/RtmpyliSjI’   ‘~/tmp/scratch/Rtmpyn4TiF’ ‘~/tmp/scratch/Rtmpyof8Yl’   ‘~/tmp/scratch/RtmpyuSGvK’ ‘~/tmp/scratch/RtmpzC7p16’   ‘~/tmp/scratch/xvfb-run.0OAk70’ ‘~/tmp/scratch/xvfb-run.0ZMXFx’   ‘~/tmp/scratch/xvfb-run.0tawVh’ ‘~/tmp/scratch/xvfb-run.1dHy9L’   ‘~/tmp/scratch/xvfb-run.2SDE5j’ ‘~/tmp/scratch/xvfb-run.2f6XKj’   ‘~/tmp/scratch/xvfb-run.3gvkMa’ ‘~/tmp/scratch/xvfb-run.4ICncH’   ‘~/tmp/scratch/xvfb-run.55aIyV’ ‘~/tmp/scratch/xvfb-run.591SwZ’   ‘~/tmp/scratch/xvfb-run.5KhM7X’ ‘~/tmp/scratch/xvfb-run.6Oy7SN’   ‘~/tmp/scratch/xvfb-run.7HGBiW’ ‘~/tmp/scratch/xvfb-run.7TVJ3a’   ‘~/tmp/scratch/xvfb-run.8dG3zv’ ‘~/tmp/scratch/xvfb-run.90fvHH’   ‘~/tmp/scratch/xvfb-run.AYquVh’ ‘~/tmp/scratch/xvfb-run.BR3261’   ‘~/tmp/scratch/xvfb-run.CB6MVH’ ‘~/tmp/scratch/xvfb-run.D9jbpC’   ‘~/tmp/scratch/xvfb-run.EmoQT3’ ‘~/tmp/scratch/xvfb-run.EwORzV’   ‘~/tmp/scratch/xvfb-run.F9LfMS’ ‘~/tmp/scratch/xvfb-run.F9xtc1’   ‘~/tmp/scratch/xvfb-run.GEMGq6’ ‘~/tmp/scratch/xvfb-run.Gs6hzM’   ‘~/tmp/scratch/xvfb-run.H4JBr6’ ‘~/tmp/scratch/xvfb-run.HMVJWU’   ‘~/tmp/scratch/xvfb-run.IVP13L’ ‘~/tmp/scratch/xvfb-run.KoAfnV’   ‘~/tmp/scratch/xvfb-run.LyUDJs’ ‘~/tmp/scratch/xvfb-run.Nk754t’   ‘~/tmp/scratch/xvfb-run.OeoS3O’ ‘~/tmp/scratch/xvfb-run.OggE3M’   ‘~/tmp/scratch/xvfb-run.OoL8WT’ ‘~/tmp/scratch/xvfb-run.PGxGg5’   ‘~/tmp/scratch/xvfb-run.PhQahc’ ‘~/tmp/scratch/xvfb-run.Qq0XPW’   ‘~/tmp/scratch/xvfb-run.REMfZU’ ‘~/tmp/scratch/xvfb-run.UBpgZm’   ‘~/tmp/scratch/xvfb-run.UV6swq’ ‘~/tmp/scratch/xvfb-run.XCqTlg’   ‘~/tmp/scratch/xvfb-run.XEX7cj’ ‘~/tmp/scratch/xvfb-run.XXvfXo’   ‘~/tmp/scratch/xvfb-run.Xax28c’ ‘~/tmp/scratch/xvfb-run.ZSw7s6’   ‘~/tmp/scratch/xvfb-run.a4y0kB’ ‘~/tmp/scratch/xvfb-run.adcRVb’   ‘~/tmp/scratch/xvfb-run.awNn6p’ ‘~/tmp/scratch/xvfb-run.bIfSCd’   ‘~/tmp/scratch/xvfb-run.brkG3d’ ‘~/tmp/scratch/xvfb-run.d2oOI8’   ‘~/tmp/scratch/xvfb-run.dKyJ30’ ‘~/tmp/scratch/xvfb-run.eGe3Sv’   ‘~/tmp/scratch/xvfb-run.eMIVMG’ ‘~/tmp/scratch/xvfb-run.faucuH’   ‘~/tmp/scratch/xvfb-run.fhvHzv’ ‘~/tmp/scratch/xvfb-run.gN43Km’   ‘~/tmp/scratch/xvfb-run.gwnybe’ ‘~/tmp/scratch/xvfb-run.hqOzIM’   ‘~/tmp/scratch/xvfb-run.mGtPsu’ ‘~/tmp/scratch/xvfb-run.nT1gxE’   ‘~/tmp/scratch/xvfb-run.pygorh’ ‘~/tmp/scratch/xvfb-run.qcljRq’   ‘~/tmp/scratch/xvfb-run.qmQzIl’ ‘~/tmp/scratch/xvfb-run.riI2GQ’   ‘~/tmp/scratch/xvfb-run.tjBg98’ ‘~/tmp/scratch/xvfb-run.u67PG0’   ‘~/tmp/scratch/xvfb-run.u8XQXf’ ‘~/tmp/scratch/xvfb-run.vPduhL’   ‘~/tmp/scratch/xvfb-run.voyNKy’ ‘~/tmp/scratch/xvfb-run.vpkTww’   ‘~/tmp/scratch/xvfb-run.wZL66y’ ‘~/tmp/scratch/xvfb-run.witngC’   ‘~/tmp/scratch/xvfb-run.x0vlGp’ ‘~/tmp/scratch/xvfb-run.zBIrJ6’   ‘~/tmp/scratch/xvfb-run.zlCc7U’   ‘/dev/shm/34fd8fe5-1a57-4513-8322-6d66f069bd9d’   ‘/dev/shm/34fd8fe5-1a57-4513-8322-6d66f069bd9d_counter’   ‘/dev/shm/4fd50e0f-5427-4d52-b5da-d9741f727397’   ‘/dev/shm/4fd50e0f-5427-4d52-b5da-d9741f727397_counter’   ‘/dev/shm/531ea30c-d777-4e4f-a1b8-b7ab97f240d8’   ‘/dev/shm/531ea30c-d777-4e4f-a1b8-b7ab97f240d8_counter’   ‘/dev/shm/814e4b93-e0e4-4640-ae31-a1a765ffcf4e’   ‘/dev/shm/814e4b93-e0e4-4640-ae31-a1a765ffcf4e_counter’   ‘/dev/shm/bcc488b7-7116-40ff-9d0d-5458702c3b05’   ‘/dev/shm/bcc488b7-7116-40ff-9d0d-5458702c3b05_counter’   ‘/dev/shm/cd0d2c91-52a6-4521-ab3d-fd6a3ace64fc’   ‘/dev/shm/cd0d2c91-52a6-4521-ab3d-fd6a3ace64fc_counter’   ‘/dev/shm/d2eec6cb-7b61-4fd4-9faf-27bfe1ed95f9’   ‘/dev/shm/d2eec6cb-7b61-4fd4-9faf-27bfe1ed95f9_counter’   ‘/dev/shm/eb3c8ec4-11b5-4e14-b533-3a09c7123b1f’   ‘/dev/shm/eb3c8ec4-11b5-4e14-b533-3a09c7123b1f_counter’
• DONE

Status: 2 NOTEs