* installing to library ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages’
* installing *source* package ‘KODAMA’ ...
** this is package ‘KODAMA’ version ‘3.0’
** package ‘KODAMA’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-15 (Debian 15.2.0-4) 15.2.0’
using C++ compiler: ‘g++-15 (Debian 15.2.0-4) 15.2.0’
make[1]: Entering directory '/tmp/Rtmp5tIxGm/R.INSTALL13dac35c158177/KODAMA/src'
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -IANN -DRANN -DARMA_64BIT_WORD=1 -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rnanoflann/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Matrix/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o
gcc-15 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -IANN -DRANN -DARMA_64BIT_WORD=1 -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rnanoflann/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Matrix/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c irlba.c -o irlba.o
g++-15 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I. -IANN -DRANN -DARMA_64BIT_WORD=1 -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rnanoflann/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Matrix/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c prova.cpp -o prova.o
prova.cpp: In function ‘arma::ivec PLSDACV_simpls(arma::mat, arma::ivec, arma::ivec, int)’:
prova.cpp:465:22: warning: ‘eT arma::Mat<eT>::max(arma::uword&) const [with eT = double; arma::uword = long long unsigned int]’ is deprecated: use .index_max() instead [-Wdeprecated-declarations]
465 | min_val = v22.max(index);
| ~~~~~~~^~~~~~~
In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include/current/armadillo:201,
from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include/RcppArmadillo.h:32,
from prova.cpp:19:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/Mat_bones.hpp:545:56: note: declared here
545 | [[deprecated("use .index_max() instead")]] inline eT max(uword& index_of_max_val) const;
| ^~~
prova.cpp: In function ‘arma::ivec PLSDACV_fastpls(arma::mat, arma::ivec, arma::ivec, int)’:
prova.cpp:528:22: warning: ‘eT arma::Mat<eT>::max(arma::uword&) const [with eT = double; arma::uword = long long unsigned int]’ is deprecated: use .index_max() instead [-Wdeprecated-declarations]
528 | min_val = v22.max(index);
| ~~~~~~~^~~~~~~
In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include/current/armadillo:692:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/Mat_meat.hpp:7850:1: note: declared here
7850 | Mat<eT>::max(uword& index_of_max_val) const
| ^~~~~~~
prova.cpp: In function ‘Rcpp::List corecpp(arma::mat, arma::mat, arma::ivec, int, int, int, arma::ivec, Rcpp::NumericVector, bool, int)’:
prova.cpp:676:26: warning: ‘eT arma::Mat<eT>::max(arma::uword&) const [with eT = double; arma::uword = long long unsigned int]’ is deprecated: use .index_max() instead [-Wdeprecated-declarations]
676 | min_val = v22.max(index);
| ~~~~~~~^~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/Mat_meat.hpp:7850:1: note: declared here
7850 | Mat<eT>::max(uword& index_of_max_val) const
| ^~~~~~~
prova.cpp:693:26: warning: ‘eT arma::Mat<eT>::max(arma::uword&) const [with eT = double; arma::uword = long long unsigned int]’ is deprecated: use .index_max() instead [-Wdeprecated-declarations]
693 | min_val = v22.max(index);
| ~~~~~~~^~~~~~~
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/Mat_meat.hpp:7850:1: note: declared here
7850 | Mat<eT>::max(uword& index_of_max_val) const
| ^~~~~~~
g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o KODAMA.so RcppExports.o irlba.o prova.o -L. -llapack -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/Rtmp5tIxGm/R.INSTALL13dac35c158177/KODAMA/src'
make[1]: Entering directory '/tmp/Rtmp5tIxGm/R.INSTALL13dac35c158177/KODAMA/src'
make[1]: Leaving directory '/tmp/Rtmp5tIxGm/R.INSTALL13dac35c158177/KODAMA/src'
installing to /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/00LOCK-KODAMA/00new/KODAMA/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (KODAMA)