• using R Under development (unstable) (2026-08-02 r90338)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-16 (Debian 16.1.0-3) 16.1.0     GNU Fortran (Debian 16.1.0-3) 16.1.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-08-03 12:12:51 UTC
• checking for file ‘JointAI/DESCRIPTION’ ... OK
• this is package ‘JointAI’ version ‘1.1.0’
• package encoding: UTF-8
• checking CRAN incoming feasibility ... [2s/3s] OK
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking serialization versions ... OK
• checking whether package ‘JointAI’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [0s/1s] OK
• checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
• checking whether the package can be unloaded cleanly ... [0s/1s] OK
• checking whether the namespace can be loaded with stated dependencies ... [0s/1s] OK
• checking whether the namespace can be unloaded cleanly ... [0s/1s] OK
• checking loading without being on the library search path ... [0s/1s] OK
• checking whether startup messages can be suppressed ... [0s/1s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [25s/29s] OK
• checking Rd files ... [1s/1s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... NOTE Rd files without \usage:   ‘sharedParams.Rd’ \arguments should not be documented without \usage.
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [0s/0s] OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [11s/13s] OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [20s/28s] OK   Running ‘testthat.R’ [19s/28s]
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [18s/24s] OK
• checking PDF version of manual ... [6s/8s] OK
• checking HTML version of manual ... [3s/4s] OK
• checking for non-standard things in the check directory ... OK
• checking for new files in some other directories ... NOTE Found the following files/directories:   ‘~/tmp/scratch/Rtmp0CbFNN’ ‘~/tmp/scratch/Rtmp1TCjjL’   ‘~/tmp/scratch/Rtmp1thniH’ ‘~/tmp/scratch/Rtmp2cy98h’   ‘~/tmp/scratch/Rtmp2s0LLf’ ‘~/tmp/scratch/Rtmp2zWkcq’   ‘~/tmp/scratch/Rtmp3MmhiO’ ‘~/tmp/scratch/Rtmp3aBzZF’   ‘~/tmp/scratch/Rtmp3mq4oK’ ‘~/tmp/scratch/Rtmp3xHXng’   ‘~/tmp/scratch/Rtmp47WrtF’ ‘~/tmp/scratch/Rtmp5HTS1H’   ‘~/tmp/scratch/Rtmp7R7bZt’ ‘~/tmp/scratch/Rtmp7jmA1K’   ‘~/tmp/scratch/Rtmp89lU4S’ ‘~/tmp/scratch/Rtmp8AroTD’   ‘~/tmp/scratch/Rtmp8Dc8Yu’ ‘~/tmp/scratch/Rtmp8EnKGy’   ‘~/tmp/scratch/Rtmp8VGEN1’ ‘~/tmp/scratch/Rtmp8Zf1Bg’   ‘~/tmp/scratch/Rtmp9R0zHp’ ‘~/tmp/scratch/Rtmp9pn8pV’   ‘~/tmp/scratch/RtmpAURd6d’ ‘~/tmp/scratch/RtmpAmAJpX’   ‘~/tmp/scratch/RtmpBsZ4XA’ ‘~/tmp/scratch/RtmpC41DHw’   ‘~/tmp/scratch/RtmpCI6xnX’ ‘~/tmp/scratch/RtmpCXReeZ’   ‘~/tmp/scratch/RtmpDokRUe’ ‘~/tmp/scratch/RtmpDuxujP’   ‘~/tmp/scratch/RtmpEMWtVg’ ‘~/tmp/scratch/RtmpESONJI’   ‘~/tmp/scratch/RtmpEsOO8B’ ‘~/tmp/scratch/RtmpF3DB4J’   ‘~/tmp/scratch/RtmpFYo0DD’ ‘~/tmp/scratch/RtmpGJXbvP’   ‘~/tmp/scratch/RtmpGOXnMe’ ‘~/tmp/scratch/RtmpHismaN’   ‘~/tmp/scratch/RtmpJ9DgP9’ ‘~/tmp/scratch/RtmpJBEwwV’   ‘~/tmp/scratch/RtmpJULcjM’ ‘~/tmp/scratch/RtmpJcqQWX’   ‘~/tmp/scratch/RtmpJmhoVe’ ‘~/tmp/scratch/RtmpJygNeZ’   ‘~/tmp/scratch/RtmpKXqTit’ ‘~/tmp/scratch/RtmpKY2CBI’   ‘~/tmp/scratch/RtmpKbsVmQ’ ‘~/tmp/scratch/RtmpKiJF6B’   ‘~/tmp/scratch/RtmpL43E4F’ ‘~/tmp/scratch/RtmpLbwnKE’   ‘~/tmp/scratch/RtmpME4uoq’ ‘~/tmp/scratch/RtmpMyMZ0G’   ‘~/tmp/scratch/RtmpN5gE2K’ ‘~/tmp/scratch/RtmpOFBUa5’   ‘~/tmp/scratch/RtmpOPKZru’ ‘~/tmp/scratch/RtmpP3d3Bw’   ‘~/tmp/scratch/RtmpPIiShG’ ‘~/tmp/scratch/RtmpPJ11SQ’   ‘~/tmp/scratch/RtmpPt2WKR’ ‘~/tmp/scratch/RtmpPwCtxW’   ‘~/tmp/scratch/RtmpQ7TjoH’ ‘~/tmp/scratch/RtmpQDE2Y1’   ‘~/tmp/scratch/RtmpQWmFtY’ ‘~/tmp/scratch/RtmpR5h8Eb’   ‘~/tmp/scratch/RtmpRYN6tZ’ ‘~/tmp/scratch/RtmpSf6oDZ’   ‘~/tmp/scratch/RtmpSjWeVK’ ‘~/tmp/scratch/RtmpSrXQZe’   ‘~/tmp/scratch/RtmpT71THL’ ‘~/tmp/scratch/RtmpTERmAs’   ‘~/tmp/scratch/RtmpTm3vJ0’ ‘~/tmp/scratch/RtmpToQZ1p’   ‘~/tmp/scratch/RtmpTru3fZ’ ‘~/tmp/scratch/RtmpUIfIa7’   ‘~/tmp/scratch/RtmpURKrfg’ ‘~/tmp/scratch/RtmpVRWMYU’   ‘~/tmp/scratch/RtmpVgCuBR’ ‘~/tmp/scratch/RtmpVsJWHn’   ‘~/tmp/scratch/RtmpWHJL60’ ‘~/tmp/scratch/RtmpWckTxd’   ‘~/tmp/scratch/RtmpWtUHIQ’ ‘~/tmp/scratch/RtmpXPL7TG’   ‘~/tmp/scratch/RtmpXVIoML’ ‘~/tmp/scratch/RtmpXZjTUJ’   ‘~/tmp/scratch/RtmpXhsrl7’ ‘~/tmp/scratch/RtmpY4WF7z’   ‘~/tmp/scratch/RtmpZ25S4v’ ‘~/tmp/scratch/RtmpZ3uFeT’   ‘~/tmp/scratch/RtmpZV5lbv’ ‘~/tmp/scratch/Rtmpa59UAy’   ‘~/tmp/scratch/RtmpaxpV6n’ ‘~/tmp/scratch/Rtmpayidri’   ‘~/tmp/scratch/Rtmpb96EC7’ ‘~/tmp/scratch/RtmpcUB3ob’   ‘~/tmp/scratch/RtmpcXFXet’ ‘~/tmp/scratch/RtmpcuE0e0’   ‘~/tmp/scratch/Rtmpdn5teJ’ ‘~/tmp/scratch/Rtmpe0Oz5c’   ‘~/tmp/scratch/Rtmpe23oRN’ ‘~/tmp/scratch/RtmpeL6CWK’   ‘~/tmp/scratch/RtmpgRKTpG’ ‘~/tmp/scratch/RtmpgS7FFk’   ‘~/tmp/scratch/RtmpgW1mXK’ ‘~/tmp/scratch/RtmpgqHqwH’   ‘~/tmp/scratch/RtmphDNY8k’ ‘~/tmp/scratch/RtmphdmZbx’   ‘~/tmp/scratch/RtmphpKeeD’ ‘~/tmp/scratch/RtmphtZenk’   ‘~/tmp/scratch/RtmpiTaWC7’ ‘~/tmp/scratch/RtmpikEusI’   ‘~/tmp/scratch/RtmpjX0hX2’ ‘~/tmp/scratch/RtmpjebXxj’   ‘~/tmp/scratch/Rtmpju4dka’ ‘~/tmp/scratch/RtmpkCkulf’   ‘~/tmp/scratch/RtmpkIKrba’ ‘~/tmp/scratch/RtmpkfSvam’   ‘~/tmp/scratch/RtmpkuVxqn’ ‘~/tmp/scratch/Rtmpl5RB1t’   ‘~/tmp/scratch/RtmplGvtef’ ‘~/tmp/scratch/RtmplKKmHj’   ‘~/tmp/scratch/RtmplgaANh’ ‘~/tmp/scratch/Rtmpm2f8WA’   ‘~/tmp/scratch/RtmpmZPzEv’ ‘~/tmp/scratch/RtmpmcLKdq’   ‘~/tmp/scratch/RtmpmpgjUj’ ‘~/tmp/scratch/RtmpnJ0mgu’   ‘~/tmp/scratch/RtmpnP0tCV’ ‘~/tmp/scratch/RtmpnUd6np’   ‘~/tmp/scratch/RtmpoGKf0F’ ‘~/tmp/scratch/RtmpojRq0n’   ‘~/tmp/scratch/RtmpowqpdQ’ ‘~/tmp/scratch/Rtmppyc3oq’   ‘~/tmp/scratch/RtmpqC6eJW’ ‘~/tmp/scratch/RtmpqJyzSn’   ‘~/tmp/scratch/RtmpqQfvah’ ‘~/tmp/scratch/RtmpqfTn4f’   ‘~/tmp/scratch/RtmpqkX4Ih’ ‘~/tmp/scratch/RtmpsCYrnM’   ‘~/tmp/scratch/RtmpsJmu3g’ ‘~/tmp/scratch/RtmpsYtHVI’   ‘~/tmp/scratch/RtmptJaPHx’ ‘~/tmp/scratch/Rtmpu4UQsZ’   ‘~/tmp/scratch/Rtmpu7zNOM’ ‘~/tmp/scratch/RtmpuEZ2Vi’   ‘~/tmp/scratch/RtmpvThJ5O’ ‘~/tmp/scratch/RtmpvlszuT’   ‘~/tmp/scratch/Rtmpwl6u5r’ ‘~/tmp/scratch/Rtmpx6dX4w’   ‘~/tmp/scratch/Rtmpx7xgBR’ ‘~/tmp/scratch/Rtmpxfr1N1’   ‘~/tmp/scratch/RtmpxzM3Qd’ ‘~/tmp/scratch/RtmpyFmrVl’   ‘~/tmp/scratch/Rtmpz9Q6E6’ ‘~/tmp/scratch/RtmpzB8RZW’   ‘~/tmp/scratch/xvfb-run.0QXQv2’ ‘~/tmp/scratch/xvfb-run.0auhjA’   ‘~/tmp/scratch/xvfb-run.2q67Zs’ ‘~/tmp/scratch/xvfb-run.3uw8rf’   ‘~/tmp/scratch/xvfb-run.41uDkY’ ‘~/tmp/scratch/xvfb-run.4tHX2c’   ‘~/tmp/scratch/xvfb-run.5PpGKa’ ‘~/tmp/scratch/xvfb-run.5UY00d’   ‘~/tmp/scratch/xvfb-run.6L2YPy’ ‘~/tmp/scratch/xvfb-run.8U12Hf’   ‘~/tmp/scratch/xvfb-run.9prwW6’ ‘~/tmp/scratch/xvfb-run.A517Qh’   ‘~/tmp/scratch/xvfb-run.ASlZwk’ ‘~/tmp/scratch/xvfb-run.AyvVUi’   ‘~/tmp/scratch/xvfb-run.BK4RuR’ ‘~/tmp/scratch/xvfb-run.BTL8No’   ‘~/tmp/scratch/xvfb-run.C3juaL’ ‘~/tmp/scratch/xvfb-run.CDHg9E’   ‘~/tmp/scratch/xvfb-run.CDZUAT’ ‘~/tmp/scratch/xvfb-run.DnlFIU’   ‘~/tmp/scratch/xvfb-run.FDS4nA’ ‘~/tmp/scratch/xvfb-run.G01NhQ’   ‘~/tmp/scratch/xvfb-run.HAEISh’ ‘~/tmp/scratch/xvfb-run.ID6dg9’   ‘~/tmp/scratch/xvfb-run.J0sqkK’ ‘~/tmp/scratch/xvfb-run.J2FE6U’   ‘~/tmp/scratch/xvfb-run.JkdeZp’ ‘~/tmp/scratch/xvfb-run.KLbeQ5’   ‘~/tmp/scratch/xvfb-run.KjMz6E’ ‘~/tmp/scratch/xvfb-run.KruOkJ’   ‘~/tmp/scratch/xvfb-run.Lzt2SI’ ‘~/tmp/scratch/xvfb-run.M07892’   ‘~/tmp/scratch/xvfb-run.M9tRFT’ ‘~/tmp/scratch/xvfb-run.O1Z4og’   ‘~/tmp/scratch/xvfb-run.O7d883’ ‘~/tmp/scratch/xvfb-run.OJmg1l’   ‘~/tmp/scratch/xvfb-run.OSuJQc’ ‘~/tmp/scratch/xvfb-run.P8t6cQ’   ‘~/tmp/scratch/xvfb-run.PUT30p’ ‘~/tmp/scratch/xvfb-run.Pjxvl5’   ‘~/tmp/scratch/xvfb-run.QMVR4C’ ‘~/tmp/scratch/xvfb-run.TpGK5Z’   ‘~/tmp/scratch/xvfb-run.XI6IEy’ ‘~/tmp/scratch/xvfb-run.XjTteB’   ‘~/tmp/scratch/xvfb-run.YqhAxw’ ‘~/tmp/scratch/xvfb-run.cFC8sy’   ‘~/tmp/scratch/xvfb-run.fP9Q0i’ ‘~/tmp/scratch/xvfb-run.fbuMo8’   ‘~/tmp/scratch/xvfb-run.fnm5eY’ ‘~/tmp/scratch/xvfb-run.ftH3wT’   ‘~/tmp/scratch/xvfb-run.gx6EIC’ ‘~/tmp/scratch/xvfb-run.lKoEpg’   ‘~/tmp/scratch/xvfb-run.nEjjY5’ ‘~/tmp/scratch/xvfb-run.nLsiVG’   ‘~/tmp/scratch/xvfb-run.oRS2wx’ ‘~/tmp/scratch/xvfb-run.qwecVI’   ‘~/tmp/scratch/xvfb-run.rHYSYk’ ‘~/tmp/scratch/xvfb-run.rHuRmz’   ‘~/tmp/scratch/xvfb-run.rbwb7t’ ‘~/tmp/scratch/xvfb-run.ryS33W’   ‘~/tmp/scratch/xvfb-run.sOMQdS’ ‘~/tmp/scratch/xvfb-run.tEIv4j’   ‘~/tmp/scratch/xvfb-run.u5iQnm’ ‘~/tmp/scratch/xvfb-run.vF5tY0’   ‘~/tmp/scratch/xvfb-run.w5UJrX’ ‘~/tmp/scratch/xvfb-run.wf3rSk’   ‘~/tmp/scratch/xvfb-run.xF2qtt’ ‘~/tmp/scratch/xvfb-run.z7n6b9’   ‘~/tmp/scratch/xvfb-run.zL5b83’ ‘~/tmp/scratch/xvfb-run.zPIxiy’   ‘~/tmp/scratch/xvfb-run.zQMZUp’ ‘~/tmp/scratch/xvfb-run.zqobex’
• DONE

Status: 2 NOTEs