• using R Under development (unstable) (2026-08-02 r90338)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-16 (Debian 16.1.0-3) 16.1.0     GNU Fortran (Debian 16.1.0-3) 16.1.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-08-03 12:12:51 UTC
• checking for file ‘JoSAE/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘JoSAE’ version ‘0.3.0’
• checking CRAN incoming feasibility ... [1s/1s] NOTE Maintainer: ‘Johannes Breidenbach <job@nibio.no>’ No Authors@R field in DESCRIPTION. Please add one, modifying   Authors@R: person(given = "Johannes",                     family = "Breidenbach",                     role = c("aut", "cre"),                     email = "job@nibio.no") as necessary.
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking serialization versions ... OK
• checking whether package ‘JoSAE’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [0s/0s] OK
• checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
• checking whether the package can be unloaded cleanly ... [0s/0s] OK
• checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
• checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
• checking loading without being on the library search path ... [0s/0s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [5s/6s] OK
• checking Rd files ... [0s/0s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [0s/0s] OK
• checking data for ASCII and uncompressed saves ... OK
• checking sizes of PDF files under ‘inst/doc’ ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [1s/1s] OK
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [3s/4s] OK
• checking PDF version of manual ... [4s/7s] OK
• checking HTML version of manual ... [1s/1s] OK
• checking for non-standard things in the check directory ... OK
• checking for new files in some other directories ... NOTE Found the following files/directories:   ‘~/tmp/scratch/Rtmp0T2jyk’ ‘~/tmp/scratch/Rtmp0fJOTl’   ‘~/tmp/scratch/Rtmp1fcsox’ ‘~/tmp/scratch/Rtmp1y90rX’   ‘~/tmp/scratch/Rtmp30NfOq’ ‘~/tmp/scratch/Rtmp3ZGW6x’   ‘~/tmp/scratch/Rtmp4wYxbX’ ‘~/tmp/scratch/Rtmp50zdYT’   ‘~/tmp/scratch/Rtmp5gKYuU’ ‘~/tmp/scratch/Rtmp65GHnu’   ‘~/tmp/scratch/Rtmp6Ax7QV’ ‘~/tmp/scratch/Rtmp6Bs0q0’   ‘~/tmp/scratch/Rtmp6BsaZI’ ‘~/tmp/scratch/Rtmp6pncdH’   ‘~/tmp/scratch/Rtmp7EVXOt’ ‘~/tmp/scratch/Rtmp7I8y1T’   ‘~/tmp/scratch/Rtmp7QyNZ5’ ‘~/tmp/scratch/Rtmp8WnZxo’   ‘~/tmp/scratch/Rtmp9K9KXJ’ ‘~/tmp/scratch/RtmpAhFw8p’   ‘~/tmp/scratch/RtmpAhs0PF’ ‘~/tmp/scratch/RtmpBetBTv’   ‘~/tmp/scratch/RtmpBvgDQk’ ‘~/tmp/scratch/RtmpC5CEW0’   ‘~/tmp/scratch/RtmpCihJHh’ ‘~/tmp/scratch/RtmpCt5xQs’   ‘~/tmp/scratch/RtmpCxg8Xa’ ‘~/tmp/scratch/RtmpDWmkFg’   ‘~/tmp/scratch/RtmpFnQnjy’ ‘~/tmp/scratch/RtmpJRHBO0’   ‘~/tmp/scratch/RtmpJo0FA0’ ‘~/tmp/scratch/RtmpKEfeIn’   ‘~/tmp/scratch/RtmpKbqbn9’ ‘~/tmp/scratch/RtmpKkSnek’   ‘~/tmp/scratch/RtmpKlz0FV’ ‘~/tmp/scratch/RtmpLklB3Y’   ‘~/tmp/scratch/RtmpLuyYmf’ ‘~/tmp/scratch/RtmpNqxjY9’   ‘~/tmp/scratch/RtmpO5IqKz’ ‘~/tmp/scratch/RtmpOav123’   ‘~/tmp/scratch/RtmpPEQrBm’ ‘~/tmp/scratch/RtmpPTG6LB’   ‘~/tmp/scratch/RtmpPny8Fh’ ‘~/tmp/scratch/RtmpPp2Vfn’   ‘~/tmp/scratch/RtmpQAVvrj’ ‘~/tmp/scratch/RtmpSn86lb’   ‘~/tmp/scratch/RtmpSpm2w6’ ‘~/tmp/scratch/RtmpTccQeD’   ‘~/tmp/scratch/RtmpTdhqnI’ ‘~/tmp/scratch/RtmpVCEcym’   ‘~/tmp/scratch/RtmpWjCUBS’ ‘~/tmp/scratch/RtmpX6wbfi’   ‘~/tmp/scratch/RtmpXF7FCd’ ‘~/tmp/scratch/RtmpXhsrl7’   ‘~/tmp/scratch/RtmpYFMgLt’ ‘~/tmp/scratch/Rtmpa6Om90’   ‘~/tmp/scratch/RtmpaPnPEK’ ‘~/tmp/scratch/RtmpbNWmz3’   ‘~/tmp/scratch/RtmpbXC1oV’ ‘~/tmp/scratch/Rtmpd6o9tg’   ‘~/tmp/scratch/RtmpeA7vPm’ ‘~/tmp/scratch/RtmpeN9bD6’   ‘~/tmp/scratch/RtmpelHi79’ ‘~/tmp/scratch/RtmpgNGvtX’   ‘~/tmp/scratch/RtmpgXwg4I’ ‘~/tmp/scratch/RtmphDNY8k’   ‘~/tmp/scratch/RtmphGNvS8’ ‘~/tmp/scratch/RtmphfDk91’   ‘~/tmp/scratch/Rtmpi1ITUn’ ‘~/tmp/scratch/Rtmpi2AyaN’   ‘~/tmp/scratch/RtmpiAzuPn’ ‘~/tmp/scratch/RtmpiFNrUj’   ‘~/tmp/scratch/RtmpjhYWF1’ ‘~/tmp/scratch/RtmpjqeQsj’   ‘~/tmp/scratch/Rtmpk5XmZf’ ‘~/tmp/scratch/RtmpkACUut’   ‘~/tmp/scratch/RtmpkVmnJx’ ‘~/tmp/scratch/RtmpkfOgcC’   ‘~/tmp/scratch/Rtmpl8BmVv’ ‘~/tmp/scratch/RtmplQlQkT’   ‘~/tmp/scratch/RtmplwM3zO’ ‘~/tmp/scratch/Rtmpm35Emi’   ‘~/tmp/scratch/RtmpmcLKdq’ ‘~/tmp/scratch/RtmpmpgjUj’   ‘~/tmp/scratch/Rtmpmygil2’ ‘~/tmp/scratch/Rtmpmyn6bX’   ‘~/tmp/scratch/RtmpnNUbcX’ ‘~/tmp/scratch/RtmpnV6G1E’   ‘~/tmp/scratch/Rtmpod48F5’ ‘~/tmp/scratch/Rtmpoee3VL’   ‘~/tmp/scratch/RtmpogNJ07’ ‘~/tmp/scratch/RtmppUDYE7’   ‘~/tmp/scratch/RtmppynF8S’ ‘~/tmp/scratch/Rtmpq0ZuDs’   ‘~/tmp/scratch/Rtmpq10mGM’ ‘~/tmp/scratch/RtmpqfTn4f’   ‘~/tmp/scratch/RtmprBA815’ ‘~/tmp/scratch/RtmprCiamH’   ‘~/tmp/scratch/RtmpsPXJ8Q’ ‘~/tmp/scratch/RtmpsYtHVI’   ‘~/tmp/scratch/RtmpsnOtlr’ ‘~/tmp/scratch/Rtmpt6oqas’   ‘~/tmp/scratch/RtmptstF44’ ‘~/tmp/scratch/RtmpuUM4uK’   ‘~/tmp/scratch/Rtmpv48jC1’ ‘~/tmp/scratch/RtmpvjayzK’   ‘~/tmp/scratch/RtmpvmXHJt’ ‘~/tmp/scratch/Rtmpvs0PSK’   ‘~/tmp/scratch/Rtmpw1QrsK’ ‘~/tmp/scratch/Rtmpw3DwJM’   ‘~/tmp/scratch/RtmpxIwW9U’ ‘~/tmp/scratch/RtmpxkovGm’   ‘~/tmp/scratch/RtmpzdRgzY’ ‘~/tmp/scratch/Rtmpzn0obV’   ‘~/tmp/scratch/xvfb-run.2RDPye’ ‘~/tmp/scratch/xvfb-run.32Wx5G’   ‘~/tmp/scratch/xvfb-run.3ikCvs’ ‘~/tmp/scratch/xvfb-run.4wIGvO’   ‘~/tmp/scratch/xvfb-run.7GTrhz’ ‘~/tmp/scratch/xvfb-run.82LDWP’   ‘~/tmp/scratch/xvfb-run.992eMy’ ‘~/tmp/scratch/xvfb-run.BjByR3’   ‘~/tmp/scratch/xvfb-run.DptJWJ’ ‘~/tmp/scratch/xvfb-run.FjpsDO’   ‘~/tmp/scratch/xvfb-run.G01NhQ’ ‘~/tmp/scratch/xvfb-run.Idj1pC’   ‘~/tmp/scratch/xvfb-run.KDUuky’ ‘~/tmp/scratch/xvfb-run.Kfp8bo’   ‘~/tmp/scratch/xvfb-run.NipEk3’ ‘~/tmp/scratch/xvfb-run.OHCjzy’   ‘~/tmp/scratch/xvfb-run.OJmg1l’ ‘~/tmp/scratch/xvfb-run.P3rRms’   ‘~/tmp/scratch/xvfb-run.S2h8jC’ ‘~/tmp/scratch/xvfb-run.Ta8t1m’   ‘~/tmp/scratch/xvfb-run.UBGcvo’ ‘~/tmp/scratch/xvfb-run.YqhAxw’   ‘~/tmp/scratch/xvfb-run.dYIAYo’ ‘~/tmp/scratch/xvfb-run.fJVsYe’   ‘~/tmp/scratch/xvfb-run.gVNHGQ’ ‘~/tmp/scratch/xvfb-run.j8SWER’   ‘~/tmp/scratch/xvfb-run.k5o3Qb’ ‘~/tmp/scratch/xvfb-run.kPBvpC’   ‘~/tmp/scratch/xvfb-run.lqEdDV’ ‘~/tmp/scratch/xvfb-run.nOtpdM’   ‘~/tmp/scratch/xvfb-run.ndrvO9’ ‘~/tmp/scratch/xvfb-run.noR8I1’   ‘~/tmp/scratch/xvfb-run.pLt6EI’ ‘~/tmp/scratch/xvfb-run.qrWoc1’   ‘~/tmp/scratch/xvfb-run.sDpn0W’ ‘~/tmp/scratch/xvfb-run.uXUpZX’   ‘~/tmp/scratch/xvfb-run.w6QZqG’ ‘~/tmp/scratch/xvfb-run.xlGVwv’   ‘~/tmp/scratch/xvfb-run.yQHjTc’
• DONE

Status: 2 NOTEs