* installing to library ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages’
* installing *source* package ‘IntegMultiReg’ ...
** this is package ‘IntegMultiReg’ version ‘0.1.0’
** package ‘IntegMultiReg’ successfully unpacked and MD5 sums checked
** using staged installation
checking for gsl-config... /usr/bin/gsl-config
configure: creating ./config.status
config.status: creating src/Makevars
** libs
using C compiler: ‘gcc-16 (Debian 16.1.0-3) 16.1.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpUwmBrV/R.INSTALL2405366fc8a97/IntegMultiReg/src'
gcc-16 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/include  -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c init.c -o init.o
gcc-16 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/include  -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c initial.c -o initial.o
gcc-16 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/include  -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c log_lik_non_local.c -o log_lik_non_local.o
gcc-16 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/include  -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c log_posterior.c -o log_posterior.o
gcc-16 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/include  -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c main_function_final.c -o main_function_final.o
main_function_final.c: In function ‘main_function’:
main_function_final.c:209:21: warning: ‘yobs’ may be used uninitialized [-Wmaybe-uninitialized]
  209 |             yobs[i] = dvector(0, sample_size_ptr[i] - 1);
      |             ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
main_function_final.c:193:14: note: ‘yobs’ was declared here
  193 |     double **yobs;
      |              ^~~~
main_function_final.c:211:22: warning: ‘yobsb’ may be used uninitialized [-Wmaybe-uninitialized]
  211 |             yobsb[i] = (_Bool *)malloc(sample_size_ptr[i] * sizeof(_Bool));
      |             ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
main_function_final.c:194:13: note: ‘yobsb’ was declared here
  194 |     _Bool **yobsb;
      |             ^~~~~
gcc-16 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/include  -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c main_prediction.c -o main_prediction.o
main_prediction.c: In function ‘main_function_prediction’:
main_prediction.c:227:20: warning: ‘ytotalb’ may be used uninitialized [-Wmaybe-uninitialized]
  227 |             _Bool *ytotalb;
      |                    ^~~~~~~
main_prediction.c:262:35: warning: ‘ytestb’ may be used uninitialized [-Wmaybe-uninitialized]
  262 |                         ytestb[i] = (_Bool)YY[m][test_index[i]][0];
      |                         ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
main_prediction.c:239:24: note: ‘ytestb’ was declared here
  239 |                 _Bool *ytestb;
      |                        ^~~~~~
main_prediction.c:266:34: warning: ‘ytest’ may be used uninitialized [-Wmaybe-uninitialized]
  266 |                         ytest[i] = YY[m][test_index[i]][0];
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
main_prediction.c:240:25: note: ‘ytest’ was declared here
  240 |                 double *ytest;
      |                         ^~~~~
gcc-16 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/include  -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c main_prediction_test.c -o main_prediction_test.o
gcc-16 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/include  -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c prediction_cv.c -o prediction_cv.o
prediction_cv.c: In function ‘predict_cv_fold’:
prediction_cv.c:252:12: warning: ‘probtest’ may be used uninitialized [-Wmaybe-uninitialized]
  252 |     return probtest;
      |            ^~~~~~~~
prediction_cv.c:201:11: note: ‘probtest’ was declared here
  201 |   double *probtest;
      |           ^~~~~~~~
gcc-16 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/include  -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c sample_gam.c -o sample_gam.o
gcc-16 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/include  -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c sample_latent_binary_outcome.c -o sample_latent_binary_outcome.o
gcc-16 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/include  -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c sample_theta.c -o sample_theta.o
gcc-16 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/include  -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c truncate.c -o truncate.o
gcc-16 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/include  -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c utils.c -o utils.o
gcc-16 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o IntegMultiReg.so init.o initial.o log_lik_non_local.o log_posterior.o main_function_final.o main_prediction.o main_prediction_test.o prediction_cv.o sample_gam.o sample_latent_binary_outcome.o sample_theta.o truncate.o utils.o -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpUwmBrV/R.INSTALL2405366fc8a97/IntegMultiReg/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpUwmBrV/R.INSTALL2405366fc8a97/IntegMultiReg/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpUwmBrV/R.INSTALL2405366fc8a97/IntegMultiReg/src'
installing to /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/00LOCK-IntegMultiReg/00new/IntegMultiReg/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (IntegMultiReg)