Check results for 'IFC'

using R Under development (unstable) (2025-10-20 r88955)
using platform: x86_64-pc-linux-gnu
R was compiled by gcc-15 (Debian 15.2.0-4) 15.2.0 GNU Fortran (Debian 15.2.0-4) 15.2.0
running under: Debian GNU/Linux forky/sid
using session charset: UTF-8
checking for file ‘IFC/DESCRIPTION’ ... OK
checking extension type ... Package
this is package ‘IFC’ version ‘0.2.1’
package encoding: UTF-8
checking CRAN incoming feasibility ... [1s/2s] OK
checking package namespace information ... OK
checking package dependencies ... INFO Package suggested but not available for checking: ‘IFCdata’
checking if this is a source package ... OK
checking if there is a namespace ... OK
checking for executable files ... OK
checking for hidden files and directories ... OK
checking for portable file names ... OK
checking for sufficient/correct file permissions ... OK
checking serialization versions ... OK
checking whether package ‘IFC’ can be installed ... OK See the install log for details.
used C++ compiler: ‘g++-15 (Debian 15.2.0-4) 15.2.0’
checking package directory ... OK
checking for future file timestamps ... OK
checking DESCRIPTION meta-information ... OK
checking top-level files ... OK
checking for left-over files ... OK
checking index information ... OK
checking package subdirectories ... OK
checking code files for non-ASCII characters ... OK
checking R files for syntax errors ... OK
checking whether the package can be loaded ... [1s/1s] OK
checking whether the package can be loaded with stated dependencies ... [1s/1s] OK
checking whether the package can be unloaded cleanly ... [1s/1s] OK
checking whether the namespace can be loaded with stated dependencies ... [1s/1s] OK
checking whether the namespace can be unloaded cleanly ... [1s/1s] OK
checking loading without being on the library search path ... [1s/1s] OK
checking whether startup messages can be suppressed ... [1s/1s] OK
checking use of S3 registration ... OK
checking dependencies in R code ... OK
checking S3 generic/method consistency ... OK
checking replacement functions ... OK
checking foreign function calls ... OK
checking R code for possible problems ... [39s/47s] OK
checking Rd files ... [1s/1s] OK
checking Rd metadata ... OK
checking Rd line widths ... OK
checking Rd cross-references ... OK
checking for missing documentation entries ... OK
checking for code/documentation mismatches ... OK
checking Rd \usage sections ... OK
checking Rd contents ... OK
checking for unstated dependencies in examples ... OK
checking line endings in C/C++/Fortran sources/headers ... OK
checking line endings in Makefiles ... OK
checking compilation flags in Makevars ... OK
checking for GNU extensions in Makefiles ... OK
checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
checking use of PKG_*FLAGS in Makefiles ... OK
checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
checking pragmas in C/C++ headers and code ... OK
checking compilation flags used ... OK
checking compiled code ... OK
checking examples ... [1s/1s] OK
checking PDF version of manual ... [12s/15s] OK
checking HTML version of manual ... [6s/11s] NOTE Found the following HTML validation problems: FCS_check_keywords.html:73:1 (FCS_check_keywords.Rd:27): Warning: missing </ul> before </div> adjustGraph.html:61:1 (adjustGraph.Rd:19): Warning: missing </ul> before </div> base_axis_constr.html:54:1 (base_axis_constr.Rd:14): Warning: missing </ul> before </div> base_hist_constr.html:92:1 (base_hist_constr.Rd:40): Warning: missing </ul> before </div> checkColor.html:46:1 (checkColor.Rd:10): Warning: missing </ul> before </div> checksumDAF.html:56:1 (checksumDAF.Rd:15): Warning: missing </ul> before </div> checksumXIF.html:51:1 (checksumXIF.Rd:12): Warning: missing </ul> before </div> cpp_assert.html:57:1 (cpp_assert.Rd:16): Warning: missing </ul> before </div> cpp_computeGamma.html:40:1 (cpp_computeGamma.Rd:7): Warning: missing </ul> before </div> cpp_ell_coord.html:44:1 (cpp_ell_coord.Rd:9): Warning: missing </ul> before </div> cpp_fast_sample.html:48:1 (cpp_fast_sample.Rd:11): Warning: missing </ul> before </div> cpp_get_bytes_order.html:52:1 (cpp_get_bytes_order.Rd:13): Warning: missing </ul> before </div> cpp_int32_to_uint32.html:40:1 (cpp_int32_to_uint32.Rd:7): Warning: missing </ul> before </div> cpp_int64_to_uint64.html:40:1 (cpp_int64_to_uint64.Rd:7): Warning: missing </ul> before </div> cpp_inv_smoothLinLog.html:54:1 (cpp_inv_smoothLinLog.Rd:13): Warning: missing </ul> before </div> cpp_mark.html:62:1 (cpp_mark.Rd:19): Warning: missing </ul> before </div> cpp_mask.html:49:1 (cpp_mask.Rd:11): Warning: missing </ul> before </div> cpp_normalize.html:57:1 (cpp_normalize.Rd:16): Warning: missing </ul> before </div> cpp_offset_to_raw.html:44:1 (cpp_offset_to_raw.Rd:9): Warning: missing </ul> before </div> cpp_pnt_in_gate.html:55:1 (cpp_pnt_in_gate.Rd:16): Warning: missing </ul> before </div> cpp_raw_to_offset.html:44:1 (cpp_raw_to_offset.Rd:9): Warning: missing </ul> before </div> cpp_replace_non_finite.html:44:1 (cpp_replace_non_finite.Rd:9): Warning: missing </ul> before </div> cpp_smoothLinLog.html:54:1 (cpp_smoothLinLog.Rd:13): Warning: missing </ul> before </div> cpp_uint32_to_int32.html:40:1 (cpp_uint32_to_int32.Rd:7): Warning: missing </ul> before </div> cpp_uint32_to_raw.html:40:1 (cpp_uint32_to_raw.Rd:7): Warning: missing </ul> before </div> cpp_uint64_to_int64.html:40:1 (cpp_uint64_to_int64.Rd:7): Warning: missing </ul> before </div> cpp_v_int32_to_uint32.html:40:1 (cpp_v_int32_to_uint32.Rd:7): Warning: missing </ul> before </div> cpp_v_int64_to_uint64.html:40:1 (cpp_v_int64_to_uint64.Rd:7): Warning: missing </ul> before </div> cpp_writeBMP.html:40:1 (cpp_writeBMP.Rd:7): Warning: missing </ul> before </div> endPB.html:46:1 (endPB.Rd:10): Warning: missing </ul> before </div> expand_list.html:50:1 (expand_list.Rd:12): Warning: missing </ul> before </div> fetch_seed.html:46:1 (fetch_seed.Rd:10): Warning: missing </ul> before </div> formatn.html:58:1 (formatn.Rd:16): Warning: missing </ul> before </div> getLuminance.html:46:1 (getLuminance.Rd:10): Warning: missing </ul> before </div> modifyGamma.html:50:1 (modifyGamma.Rd:12): Warning: missing </ul> before </div> objectWrite.html:54:1 (objectWrite.Rd:14): Warning: missing </ul> before </div> plot_base.html:46:1 (plot_base.Rd:10): Warning: missing </ul> before </div> plot_lattice.html:46:1 (plot_lattice.Rd:10): Warning: missing </ul> before </div> plot_raster.html:51:1 (plot_raster.Rd:13): Warning: missing </ul> before </div> plot_stats.html:46:1 (plot_stats.Rd:10): Warning: missing </ul> before </div> popsGetAffiliation.html:46:1 (popsGetAffiliation.Rd:10): Warning: missing </ul> before </div> popsGetLevels.html:46:1 (popsGetLevels.Rd:10): Warning: missing </ul> before </div> popsOrderNodes.html:46:1 (popsOrderNodes.Rd:10): Warning: missing </ul> before </div> protectn.html:46:1 (protectn.Rd:10): Warning: missing </ul> before </div> readFCSdata.html:78:1 (readFCSdata.Rd:30): Warning: missing </ul> before </div> readFCSdelimiter.html:62:1 (readFCSdelimiter.Rd:18): Warning: missing </ul> before </div> readFCSheader.html:64:1 (readFCSheader.Rd:22): Warning: missing </ul> before </div> readFCStext.html:83:1 (readFCStext.Rd:33): Warning: missing </ul> before </div> rev_string.html:46:1 (rev_string.Rd:10): Warning: missing </ul> before </div> setPB.html:54:1 (setPB.Rd:14): Warning: missing </ul> before </div> specialr.html:58:1 (specialr.Rd:18): Warning: missing </ul> before </div> splitn.html:78:1 (splitn.Rd:30): Warning: missing </ul> before </div> toCapFirstOnly.html:46:1 (toCapFirstOnly.Rd:10): Warning: missing </ul> before </div> toEllipse.html:54:1 (toEllipse.Rd:14): Warning: missing </ul> before </div>
checking for non-standard things in the check directory ... OK
DONE

Status: 1 NOTE