- using R Under development (unstable) (2026-08-02 r90338)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
gcc-16 (Debian 16.1.0-3) 16.1.0
GNU Fortran (Debian 16.1.0-3) 16.1.0
- running under: Debian GNU/Linux forky/sid
- using session charset: UTF-8
* current time: 2026-08-03 11:56:49 UTC
- checking for file ‘ICSClust/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘ICSClust’ version ‘0.1.1’
- package encoding: UTF-8
- checking CRAN incoming feasibility ... [1s/2s] OK
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking serialization versions ... OK
- checking whether package ‘ICSClust’ can be installed ... OK
See the install log for details.
- used C++ compiler: ‘g++-16 (Debian 16.1.0-3) 16.1.0’
- checking package directory ... OK
- checking for future file timestamps ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [5s/6s] OK
- checking whether the package can be loaded with stated dependencies ... [4s/5s] OK
- checking whether the package can be unloaded cleanly ... [4s/6s] OK
- checking whether the namespace can be loaded with stated dependencies ... [4s/5s] OK
- checking whether the namespace can be unloaded cleanly ... [4s/6s] OK
- checking loading without being on the library search path ... [4s/6s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [22s/30s] OK
- checking Rd files ... [0s/1s] OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking line endings in C/C++/Fortran sources/headers ... OK
- checking line endings in Makefiles ... OK
- checking compilation flags in Makevars ... OK
- checking for GNU extensions in Makefiles ... OK
- checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
- checking use of PKG_*FLAGS in Makefiles ... OK
- checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
- checking pragmas in C/C++ headers and code ... OK
- checking compilation flags used ... OK
- checking compiled code ... OK
- checking examples ... [15s/16s] OK
Examples with CPU (user + system) or elapsed time > 5s
user system elapsed
component_plot 5.179 0.111 5.296
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [6s/6s] OK
Running ‘testthat.R’ [5s/5s]
- checking PDF version of manual ... [3s/3s] OK
- checking HTML version of manual ... [1s/1s] OK
- checking for non-standard things in the check directory ... OK
- checking for new files in some other directories ... NOTE
Found the following files/directories:
‘~/tmp/scratch/Rtmp0FIJAC’ ‘~/tmp/scratch/Rtmp0ZOIfJ’
‘~/tmp/scratch/Rtmp0hx59L’ ‘~/tmp/scratch/Rtmp0v8O8f’
‘~/tmp/scratch/Rtmp1015Cy’ ‘~/tmp/scratch/Rtmp1RGfDY’
‘~/tmp/scratch/Rtmp2IT6gB’ ‘~/tmp/scratch/Rtmp2TTMRZ’
‘~/tmp/scratch/Rtmp3F6DsP’ ‘~/tmp/scratch/Rtmp3K2vgC’
‘~/tmp/scratch/Rtmp3tZNJu’ ‘~/tmp/scratch/Rtmp4RkRHp’
‘~/tmp/scratch/Rtmp4fvF9j’ ‘~/tmp/scratch/Rtmp5xd2Jh’
‘~/tmp/scratch/Rtmp6T40zW’ ‘~/tmp/scratch/Rtmp73t0my’
‘~/tmp/scratch/Rtmp83sPOX’ ‘~/tmp/scratch/Rtmp84Roe4’
‘~/tmp/scratch/Rtmp856U7B’ ‘~/tmp/scratch/Rtmp9H1bas’
‘~/tmp/scratch/Rtmp9hRQFy’ ‘~/tmp/scratch/RtmpAyyxVl’
‘~/tmp/scratch/RtmpBXNgyK’ ‘~/tmp/scratch/RtmpBy0wIk’
‘~/tmp/scratch/RtmpCVOaJJ’ ‘~/tmp/scratch/RtmpCqbs72’
‘~/tmp/scratch/RtmpDU8GdI’ ‘~/tmp/scratch/RtmpEvfXzV’
‘~/tmp/scratch/RtmpFKhuhZ’ ‘~/tmp/scratch/RtmpFYC3bY’
‘~/tmp/scratch/RtmpFqY1fr’ ‘~/tmp/scratch/RtmpFzyL9G’
‘~/tmp/scratch/RtmpHB9Ije’ ‘~/tmp/scratch/RtmpI1UlON’
‘~/tmp/scratch/RtmpIQcb8v’ ‘~/tmp/scratch/RtmpIej4UE’
‘~/tmp/scratch/RtmpJJygsv’ ‘~/tmp/scratch/RtmpKKHNQr’
‘~/tmp/scratch/RtmpKn4p87’ ‘~/tmp/scratch/RtmpLMQ4eA’
‘~/tmp/scratch/RtmpLp9ALo’ ‘~/tmp/scratch/RtmpM1tM9U’
‘~/tmp/scratch/RtmpM8CiBC’ ‘~/tmp/scratch/RtmpMigbFu’
‘~/tmp/scratch/RtmpMjeIfa’ ‘~/tmp/scratch/RtmpMkLkfC’
‘~/tmp/scratch/RtmpNPHFMz’ ‘~/tmp/scratch/RtmpNQT48w’
‘~/tmp/scratch/RtmpNwEC7N’ ‘~/tmp/scratch/RtmpO05SJF’
‘~/tmp/scratch/RtmpOKfLy8’ ‘~/tmp/scratch/RtmpP6gFRF’
‘~/tmp/scratch/RtmpPi71A5’ ‘~/tmp/scratch/RtmpT5da4l’
‘~/tmp/scratch/RtmpTNpiJh’ ‘~/tmp/scratch/RtmpTVb3IU’
‘~/tmp/scratch/RtmpUUGR40’ ‘~/tmp/scratch/RtmpVYecgh’
‘~/tmp/scratch/RtmpVo3kaR’ ‘~/tmp/scratch/RtmpXKvkRA’
‘~/tmp/scratch/RtmpXc2W2W’ ‘~/tmp/scratch/RtmpYU0J10’
‘~/tmp/scratch/RtmpYWHEor’ ‘~/tmp/scratch/RtmpYWRPWZ’
‘~/tmp/scratch/RtmpYcthgg’ ‘~/tmp/scratch/RtmpZ15PJr’
‘~/tmp/scratch/RtmpZz7OGz’ ‘~/tmp/scratch/Rtmpa1O0mO’
‘~/tmp/scratch/RtmpaK22gs’ ‘~/tmp/scratch/Rtmpay58r6’
‘~/tmp/scratch/RtmpbLmmJL’ ‘~/tmp/scratch/RtmpbTAFBp’
‘~/tmp/scratch/RtmpcNiEja’ ‘~/tmp/scratch/RtmpciM0Ri’
‘~/tmp/scratch/RtmpdWPGWj’ ‘~/tmp/scratch/RtmpdXHqJG’
‘~/tmp/scratch/Rtmpe6cRen’ ‘~/tmp/scratch/RtmpeiUbbQ’
‘~/tmp/scratch/RtmpgGMgph’ ‘~/tmp/scratch/RtmpgQhUVn’
‘~/tmp/scratch/RtmpgmcW0g’ ‘~/tmp/scratch/RtmphMCM0J’
‘~/tmp/scratch/RtmphUh6In’ ‘~/tmp/scratch/RtmphaFgaB’
‘~/tmp/scratch/RtmphkFe5X’ ‘~/tmp/scratch/Rtmpibzn89’
‘~/tmp/scratch/RtmpjK0qiV’ ‘~/tmp/scratch/RtmpjnHeRC’
‘~/tmp/scratch/RtmpkHIyb0’ ‘~/tmp/scratch/RtmplBoxey’
‘~/tmp/scratch/Rtmplpwe2D’ ‘~/tmp/scratch/RtmpmFK7ed’
‘~/tmp/scratch/RtmpmKtSoS’ ‘~/tmp/scratch/Rtmpn8whND’
‘~/tmp/scratch/RtmpnHNLJ6’ ‘~/tmp/scratch/RtmpnZmnTU’
‘~/tmp/scratch/RtmpnjzeZc’ ‘~/tmp/scratch/RtmporTwbA’
‘~/tmp/scratch/Rtmppw6vYv’ ‘~/tmp/scratch/Rtmpqq4GTI’
‘~/tmp/scratch/RtmptmbZIf’ ‘~/tmp/scratch/Rtmpu4HWZh’
‘~/tmp/scratch/RtmpuHydSI’ ‘~/tmp/scratch/RtmpuZAGr6’
‘~/tmp/scratch/Rtmpudi2HB’ ‘~/tmp/scratch/RtmpvbyX9t’
‘~/tmp/scratch/RtmpvfjfFb’ ‘~/tmp/scratch/Rtmpw8LN7E’
‘~/tmp/scratch/RtmpwzyGRC’ ‘~/tmp/scratch/RtmpxVwpcB’
‘~/tmp/scratch/RtmpxnuMTM’ ‘~/tmp/scratch/RtmpyboGYe’
‘~/tmp/scratch/RtmpynAq0P’ ‘~/tmp/scratch/xvfb-run.0fA6QW’
‘~/tmp/scratch/xvfb-run.0gP1BP’ ‘~/tmp/scratch/xvfb-run.2Ph8aX’
‘~/tmp/scratch/xvfb-run.2vz09V’ ‘~/tmp/scratch/xvfb-run.4ZmTHd’
‘~/tmp/scratch/xvfb-run.5DIXjc’ ‘~/tmp/scratch/xvfb-run.6Fwadb’
‘~/tmp/scratch/xvfb-run.6Hdj2o’ ‘~/tmp/scratch/xvfb-run.6j6ge5’
‘~/tmp/scratch/xvfb-run.7KBY8V’ ‘~/tmp/scratch/xvfb-run.7ZpXi7’
‘~/tmp/scratch/xvfb-run.8AXGwr’ ‘~/tmp/scratch/xvfb-run.8Dr4Do’
‘~/tmp/scratch/xvfb-run.906m2i’ ‘~/tmp/scratch/xvfb-run.9KLT3p’
‘~/tmp/scratch/xvfb-run.9dJ1Sq’ ‘~/tmp/scratch/xvfb-run.Ab0MI3’
‘~/tmp/scratch/xvfb-run.F8IC7D’ ‘~/tmp/scratch/xvfb-run.GgbolD’
‘~/tmp/scratch/xvfb-run.H99845’ ‘~/tmp/scratch/xvfb-run.HFRwbS’
‘~/tmp/scratch/xvfb-run.IwndzU’ ‘~/tmp/scratch/xvfb-run.J9jh07’
‘~/tmp/scratch/xvfb-run.JRqwPm’ ‘~/tmp/scratch/xvfb-run.JuEra3’
‘~/tmp/scratch/xvfb-run.K1tZjA’ ‘~/tmp/scratch/xvfb-run.KR6Vkg’
‘~/tmp/scratch/xvfb-run.KcqmPC’ ‘~/tmp/scratch/xvfb-run.KeMOAH’
‘~/tmp/scratch/xvfb-run.KyWhPw’ ‘~/tmp/scratch/xvfb-run.ORIMsP’
‘~/tmp/scratch/xvfb-run.PqMtMy’ ‘~/tmp/scratch/xvfb-run.RGM91N’
‘~/tmp/scratch/xvfb-run.RMMcVV’ ‘~/tmp/scratch/xvfb-run.TATDY4’
‘~/tmp/scratch/xvfb-run.TAusff’ ‘~/tmp/scratch/xvfb-run.Tf1NGe’
‘~/tmp/scratch/xvfb-run.UwIOQx’ ‘~/tmp/scratch/xvfb-run.V51Kwb’
‘~/tmp/scratch/xvfb-run.VIduY4’ ‘~/tmp/scratch/xvfb-run.VfryM8’
‘~/tmp/scratch/xvfb-run.Wmnbhy’ ‘~/tmp/scratch/xvfb-run.XmEwhN’
‘~/tmp/scratch/xvfb-run.a8r2kT’ ‘~/tmp/scratch/xvfb-run.asPLlR’
‘~/tmp/scratch/xvfb-run.b0MtaE’ ‘~/tmp/scratch/xvfb-run.ckebyh’
‘~/tmp/scratch/xvfb-run.crlnW8’ ‘~/tmp/scratch/xvfb-run.dkN3kP’
‘~/tmp/scratch/xvfb-run.f4rQGg’ ‘~/tmp/scratch/xvfb-run.fcxL4y’
‘~/tmp/scratch/xvfb-run.gEx0Su’ ‘~/tmp/scratch/xvfb-run.gGzuDY’
‘~/tmp/scratch/xvfb-run.ggd6wy’ ‘~/tmp/scratch/xvfb-run.kdAlL0’
‘~/tmp/scratch/xvfb-run.lptZZX’ ‘~/tmp/scratch/xvfb-run.m6Pic2’
‘~/tmp/scratch/xvfb-run.nOhJ0L’ ‘~/tmp/scratch/xvfb-run.nPY5OX’
‘~/tmp/scratch/xvfb-run.nR7REE’ ‘~/tmp/scratch/xvfb-run.nUDGUN’
‘~/tmp/scratch/xvfb-run.qEMjfe’ ‘~/tmp/scratch/xvfb-run.rvlUlX’
‘~/tmp/scratch/xvfb-run.shiSpw’ ‘~/tmp/scratch/xvfb-run.sow1kQ’
‘~/tmp/scratch/xvfb-run.szApdH’ ‘~/tmp/scratch/xvfb-run.tlJIPm’
‘~/tmp/scratch/xvfb-run.uaGlF0’ ‘~/tmp/scratch/xvfb-run.ucpzjF’
‘~/tmp/scratch/xvfb-run.wypJdJ’ ‘~/tmp/scratch/xvfb-run.xYcnKD’
‘~/tmp/scratch/xvfb-run.y9AIXF’ ‘~/tmp/scratch/xvfb-run.ygjrcm’
‘~/tmp/scratch/xvfb-run.z1xLVq’ ‘~/tmp/scratch/xvfb-run.zZOdZz’
- DONE
Status: 1 NOTE