Check results for 'GNE'

using R Under development (unstable) (2026-08-02 r90338)
using platform: x86_64-pc-linux-gnu
R was compiled by gcc-16 (Debian 16.1.0-3) 16.1.0 GNU Fortran (Debian 16.1.0-3) 16.1.0
running under: Debian GNU/Linux forky/sid
using session charset: UTF-8 * current time: 2026-08-03 11:48:58 UTC
checking for file ‘GNE/DESCRIPTION’ ... OK
checking extension type ... Package
this is package ‘GNE’ version ‘0.99-6’
package encoding: UTF-8
checking CRAN incoming feasibility ... [2s/2s] OK
checking package namespace information ... OK
checking package dependencies ... OK
checking if this is a source package ... OK
checking if there is a namespace ... OK
checking for executable files ... OK
checking for hidden files and directories ... OK
checking for portable file names ... OK
checking for sufficient/correct file permissions ... OK
checking serialization versions ... OK
checking whether package ‘GNE’ can be installed ... OK See the install log for details.
used C compiler: ‘gcc-16 (Debian 16.1.0-3) 16.1.0’
checking package directory ... OK
checking for future file timestamps ... OK
checking ‘build’ directory ... OK
checking DESCRIPTION meta-information ... OK
checking top-level files ... OK
checking for left-over files ... OK
checking index information ... OK
checking package subdirectories ... OK
checking code files for non-ASCII characters ... OK
checking R files for syntax errors ... OK
checking whether the package can be loaded ... [0s/0s] OK
checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
checking whether the package can be unloaded cleanly ... [0s/0s] OK
checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
checking loading without being on the library search path ... [0s/0s] OK
checking use of S3 registration ... OK
checking dependencies in R code ... OK
checking S3 generic/method consistency ... OK
checking replacement functions ... OK
checking foreign function calls ... OK
checking R code for possible problems ... [15s/20s] OK
checking Rd files ... [0s/1s] OK
checking Rd metadata ... OK
checking Rd line widths ... OK
checking Rd cross-references ... OK
checking for missing documentation entries ... OK
checking for code/documentation mismatches ... OK
checking Rd \usage sections ... OK
checking Rd contents ... OK
checking for unstated dependencies in examples ... OK
checking line endings in C/C++/Fortran sources/headers ... OK
checking pragmas in C/C++ headers and code ... OK
checking compilation flags used ... OK
checking compiled code ... OK
checking sizes of PDF files under ‘inst/doc’ ... OK
checking installed files from ‘inst/doc’ ... OK
checking files in ‘vignettes’ ... OK
checking examples ... [1s/1s] OK
checking for unstated dependencies in ‘tests’ ... OK
checking tests ... [11s/16s] OK Running ‘CER-funCER-Rcode-constr.R’ [0s/1s] Running ‘CER-funCER-Rcode-constrjoint.R’ [0s/1s] Running ‘CER-funCER-Rcode-joint.R’ [0s/1s] Running ‘GNEceq-examples.R’ [1s/2s] Running ‘GNEnseq-examples.R’ [1s/1s] Running ‘NIR-func-Rcode.R’ [2s/3s] Running ‘NIRandVIPexample.R’ [1s/2s] Running ‘SSR-Rcode-funSSRcheck-constrjoint.R’ [1s/1s] Running ‘SSR-funSSR-Rcode-constr.R’ [0s/1s] Running ‘SSR-funSSR-funSSRcheck-constr.R’ [0s/1s] Running ‘SSR-funSSR-funSSRcheck-constrjoint.R’ [0s/1s] Running ‘SSR-testarg.R’ [0s/1s] Running ‘complfunc-3Dplot.R’ [0s/1s] Running ‘complfunc-funcFB.R’ [0s/1s] Running ‘complfunc-limitgraph.R’ [0s/1s] Running ‘util-testfunc.R’ [0s/0s]
checking for unstated dependencies in vignettes ... OK
checking package vignettes ... OK
checking re-building of vignette outputs ... [8s/11s] OK
checking PDF version of manual ... [5s/8s] OK
checking HTML version of manual ... [2s/2s] OK
checking for non-standard things in the check directory ... OK
checking for new files in some other directories ... NOTE Found the following files/directories: ‘~/tmp/scratch/Rtmp0mLPsf’ ‘~/tmp/scratch/Rtmp19OtzV’ ‘~/tmp/scratch/Rtmp33g6at’ ‘~/tmp/scratch/Rtmp3gIJWL’ ‘~/tmp/scratch/Rtmp47RE2v’ ‘~/tmp/scratch/Rtmp48pTX1’ ‘~/tmp/scratch/Rtmp4K02Kj’ ‘~/tmp/scratch/Rtmp5fLUm0’ ‘~/tmp/scratch/Rtmp5woNKb’ ‘~/tmp/scratch/Rtmp6BptkL’ ‘~/tmp/scratch/Rtmp6XsS2U’ ‘~/tmp/scratch/Rtmp758rqD’ ‘~/tmp/scratch/Rtmp7iq6Qc’ ‘~/tmp/scratch/Rtmp7xgsXE’ ‘~/tmp/scratch/Rtmp8AhPTy’ ‘~/tmp/scratch/Rtmp8HfGHc’ ‘~/tmp/scratch/Rtmp8LwxV8’ ‘~/tmp/scratch/Rtmp8U7gHb’ ‘~/tmp/scratch/Rtmp9WJkRF’ ‘~/tmp/scratch/Rtmp9dZIhW’ ‘~/tmp/scratch/Rtmp9taFRA’ ‘~/tmp/scratch/RtmpADZPjP’ ‘~/tmp/scratch/RtmpAUCzyZ’ ‘~/tmp/scratch/RtmpAe0edj’ ‘~/tmp/scratch/RtmpB4jG8W’ ‘~/tmp/scratch/RtmpBQGn7V’ ‘~/tmp/scratch/RtmpBTZziZ’ ‘~/tmp/scratch/RtmpBUJXU0’ ‘~/tmp/scratch/RtmpC70KhZ’ ‘~/tmp/scratch/RtmpCybmzh’ ‘~/tmp/scratch/RtmpEMwXqZ’ ‘~/tmp/scratch/RtmpFJxSRB’ ‘~/tmp/scratch/RtmpFeppbC’ ‘~/tmp/scratch/RtmpGNZtOV’ ‘~/tmp/scratch/RtmpH2XMa6’ ‘~/tmp/scratch/RtmpH5PL0E’ ‘~/tmp/scratch/RtmpHFuszU’ ‘~/tmp/scratch/RtmpHceerH’ ‘~/tmp/scratch/RtmpIffPVg’ ‘~/tmp/scratch/RtmpJZLVN5’ ‘~/tmp/scratch/RtmpJv86aa’ ‘~/tmp/scratch/RtmpJwM0rZ’ ‘~/tmp/scratch/RtmpLBanaf’ ‘~/tmp/scratch/RtmpOULyQ5’ ‘~/tmp/scratch/RtmpOoSaCV’ ‘~/tmp/scratch/RtmpOqvrpF’ ‘~/tmp/scratch/RtmpOvcxEa’ ‘~/tmp/scratch/RtmpPRYrSS’ ‘~/tmp/scratch/RtmpPYGSnx’ ‘~/tmp/scratch/RtmpPenTbt’ ‘~/tmp/scratch/RtmpRblITG’ ‘~/tmp/scratch/RtmpS1qtA7’ ‘~/tmp/scratch/RtmpT12TYm’ ‘~/tmp/scratch/RtmpTBWFaH’ ‘~/tmp/scratch/RtmpTGnXlJ’ ‘~/tmp/scratch/RtmpTuDFXt’ ‘~/tmp/scratch/RtmpU1zszw’ ‘~/tmp/scratch/RtmpU2G42c’ ‘~/tmp/scratch/RtmpU4HN6e’ ‘~/tmp/scratch/RtmpUrKXIK’ ‘~/tmp/scratch/RtmpWKcX5F’ ‘~/tmp/scratch/RtmpWs5fh7’ ‘~/tmp/scratch/RtmpXRiVmB’ ‘~/tmp/scratch/RtmpY056pf’ ‘~/tmp/scratch/RtmpY4wdKs’ ‘~/tmp/scratch/RtmpYLsX8w’ ‘~/tmp/scratch/RtmpYgliWT’ ‘~/tmp/scratch/RtmpYwvyUs’ ‘~/tmp/scratch/RtmpZ1PcsY’ ‘~/tmp/scratch/RtmpZ9HHu6’ ‘~/tmp/scratch/RtmpZo7ZSA’ ‘~/tmp/scratch/RtmpZprmuI’ ‘~/tmp/scratch/RtmpZr8qMk’ ‘~/tmp/scratch/RtmpaNIJZd’ ‘~/tmp/scratch/RtmpbDcH3g’ ‘~/tmp/scratch/RtmpbhYUUP’ ‘~/tmp/scratch/RtmpcAknu4’ ‘~/tmp/scratch/RtmpcfdwAY’ ‘~/tmp/scratch/RtmpchcFDC’ ‘~/tmp/scratch/Rtmpcj41K8’ ‘~/tmp/scratch/RtmpclsSEj’ ‘~/tmp/scratch/RtmpcqeVxI’ ‘~/tmp/scratch/Rtmpd346Ls’ ‘~/tmp/scratch/Rtmpd9Kmcu’ ‘~/tmp/scratch/RtmpdJNwMi’ ‘~/tmp/scratch/RtmpdNHSxI’ ‘~/tmp/scratch/RtmpdyqiYe’ ‘~/tmp/scratch/RtmpeXF1vi’ ‘~/tmp/scratch/RtmpewmWZK’ ‘~/tmp/scratch/RtmpexOVeg’ ‘~/tmp/scratch/Rtmpf4zcNM’ ‘~/tmp/scratch/Rtmpf7Dgvd’ ‘~/tmp/scratch/RtmpfQaHCx’ ‘~/tmp/scratch/RtmpfbiR4E’ ‘~/tmp/scratch/RtmpgRFMVm’ ‘~/tmp/scratch/RtmpgWYRNd’ ‘~/tmp/scratch/Rtmphni8qe’ ‘~/tmp/scratch/RtmpiLP8tS’ ‘~/tmp/scratch/Rtmpjlq9JX’ ‘~/tmp/scratch/RtmpjnuhP7’ ‘~/tmp/scratch/RtmpkL9iek’ ‘~/tmp/scratch/RtmpkZ5vPn’ ‘~/tmp/scratch/RtmpksvdrR’ ‘~/tmp/scratch/Rtmpky5IG2’ ‘~/tmp/scratch/RtmplBW8OW’ ‘~/tmp/scratch/RtmplCKOn0’ ‘~/tmp/scratch/Rtmpm7JYRC’ ‘~/tmp/scratch/RtmpmOs9Rr’ ‘~/tmp/scratch/RtmpnBEvYI’ ‘~/tmp/scratch/RtmpnoH21V’ ‘~/tmp/scratch/Rtmpoxh7SU’ ‘~/tmp/scratch/RtmppVOjlD’ ‘~/tmp/scratch/RtmppthhR7’ ‘~/tmp/scratch/RtmpqHBEyb’ ‘~/tmp/scratch/RtmpqPndg9’ ‘~/tmp/scratch/RtmprDNfAh’ ‘~/tmp/scratch/RtmprrQUm1’ ‘~/tmp/scratch/RtmprwBcnF’ ‘~/tmp/scratch/RtmpscGCzU’ ‘~/tmp/scratch/RtmpsjnyiQ’ ‘~/tmp/scratch/RtmpsuhT5x’ ‘~/tmp/scratch/RtmpsyVeRa’ ‘~/tmp/scratch/RtmpuZyKE0’ ‘~/tmp/scratch/Rtmpv7bfVc’ ‘~/tmp/scratch/RtmpvPz3YI’ ‘~/tmp/scratch/RtmpvlRVyp’ ‘~/tmp/scratch/Rtmpvy5KhW’ ‘~/tmp/scratch/RtmpwskpqD’ ‘~/tmp/scratch/RtmpxhKHlF’ ‘~/tmp/scratch/Rtmpz9XWmY’ ‘~/tmp/scratch/RtmpzT7lxS’ ‘~/tmp/scratch/RtmpzbVngO’ ‘~/tmp/scratch/xvfb-run.0dLTn4’ ‘~/tmp/scratch/xvfb-run.3hyKKA’ ‘~/tmp/scratch/xvfb-run.4OKnvx’ ‘~/tmp/scratch/xvfb-run.5QgZ3D’ ‘~/tmp/scratch/xvfb-run.6skVnb’ ‘~/tmp/scratch/xvfb-run.73NIrh’ ‘~/tmp/scratch/xvfb-run.8OkY25’ ‘~/tmp/scratch/xvfb-run.8qNtKy’ ‘~/tmp/scratch/xvfb-run.BMpdPQ’ ‘~/tmp/scratch/xvfb-run.C7yxty’ ‘~/tmp/scratch/xvfb-run.E2ABVv’ ‘~/tmp/scratch/xvfb-run.FF3563’ ‘~/tmp/scratch/xvfb-run.FqHHwS’ ‘~/tmp/scratch/xvfb-run.HoHW13’ ‘~/tmp/scratch/xvfb-run.HpaG7K’ ‘~/tmp/scratch/xvfb-run.IqFyty’ ‘~/tmp/scratch/xvfb-run.O2Y65S’ ‘~/tmp/scratch/xvfb-run.Onm37I’ ‘~/tmp/scratch/xvfb-run.Q5NuSQ’ ‘~/tmp/scratch/xvfb-run.Qjrdnu’ ‘~/tmp/scratch/xvfb-run.SQDWET’ ‘~/tmp/scratch/xvfb-run.TkBxqr’ ‘~/tmp/scratch/xvfb-run.Wh1V0q’ ‘~/tmp/scratch/xvfb-run.WpNW1l’ ‘~/tmp/scratch/xvfb-run.YV1IiU’ ‘~/tmp/scratch/xvfb-run.YeLFuw’ ‘~/tmp/scratch/xvfb-run.Ypu82j’ ‘~/tmp/scratch/xvfb-run.Yx2xN1’ ‘~/tmp/scratch/xvfb-run.cbauHv’ ‘~/tmp/scratch/xvfb-run.cp9nmh’ ‘~/tmp/scratch/xvfb-run.dZcJRR’ ‘~/tmp/scratch/xvfb-run.fv4Xw1’ ‘~/tmp/scratch/xvfb-run.gOb28O’ ‘~/tmp/scratch/xvfb-run.klEgyi’ ‘~/tmp/scratch/xvfb-run.lgbu7B’ ‘~/tmp/scratch/xvfb-run.lo1FlG’ ‘~/tmp/scratch/xvfb-run.m3Lstl’ ‘~/tmp/scratch/xvfb-run.mzBnpf’ ‘~/tmp/scratch/xvfb-run.nlodZ4’ ‘~/tmp/scratch/xvfb-run.pODQfU’ ‘~/tmp/scratch/xvfb-run.pPKJNh’ ‘~/tmp/scratch/xvfb-run.po1AjK’ ‘~/tmp/scratch/xvfb-run.qkAHRg’ ‘~/tmp/scratch/xvfb-run.rTPpsQ’ ‘~/tmp/scratch/xvfb-run.uTHgjB’ ‘~/tmp/scratch/xvfb-run.utaAYg’ ‘~/tmp/scratch/xvfb-run.vKJjXV’ ‘~/tmp/scratch/xvfb-run.wLgw7g’ ‘~/tmp/scratch/xvfb-run.xVb4S6’ ‘~/tmp/scratch/xvfb-run.yQ4A11’ ‘~/tmp/scratch/xvfb-run.yv9ClO’ ‘~/tmp/scratch/xvfb-run.zKn5qo’ ‘~/tmp/scratch/xvfb-run.zLJUVy’ ‘~/tmp/scratch/xvfb-run.zce5E5’
DONE

Status: 1 NOTE