• using R Under development (unstable) (2026-07-30 r90327)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-16 (Debian 16.1.0-3) 16.1.0     GNU Fortran (Debian 16.1.0-3) 16.1.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-07-31 11:47:05 UTC
• checking for file ‘GAGBLUP/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘GAGBLUP’ version ‘1.0’
• package encoding: UTF-8
• checking CRAN incoming feasibility ... [1s/1s] OK
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘GAGBLUP’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [0s/1s] OK
• checking whether the package can be loaded with stated dependencies ... [0s/1s] OK
• checking whether the package can be unloaded cleanly ... [0s/1s] OK
• checking whether the namespace can be loaded with stated dependencies ... [0s/1s] OK
• checking whether the namespace can be unloaded cleanly ... [0s/1s] OK
• checking loading without being on the library search path ... [0s/1s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [4s/6s] OK
• checking Rd files ... [0s/0s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [0s/0s] OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking examples ... [1s/4s] OK
• checking PDF version of manual ... [4s/5s] OK
• checking HTML version of manual ... [0s/0s] OK
• checking for non-standard things in the check directory ... OK
• checking for new files in some other directories ... NOTE Found the following files/directories:   ‘~/tmp/scratch/Rtmp0D6hQP’ ‘~/tmp/scratch/Rtmp0TYmjt’   ‘~/tmp/scratch/Rtmp1H7J5A’ ‘~/tmp/scratch/Rtmp1XemdR’   ‘~/tmp/scratch/Rtmp1f9TQa’ ‘~/tmp/scratch/Rtmp1mrOK4’   ‘~/tmp/scratch/Rtmp26LLKU’ ‘~/tmp/scratch/Rtmp2N7Eie’   ‘~/tmp/scratch/Rtmp345iah’ ‘~/tmp/scratch/Rtmp4EeFQK’   ‘~/tmp/scratch/Rtmp6Kt4Ul’ ‘~/tmp/scratch/Rtmp6UYvm9’   ‘~/tmp/scratch/Rtmp7LhSoe’ ‘~/tmp/scratch/Rtmp7n6gn4’   ‘~/tmp/scratch/Rtmp7yDxZd’ ‘~/tmp/scratch/Rtmp807OWl’   ‘~/tmp/scratch/Rtmp8bYjNg’ ‘~/tmp/scratch/Rtmp9SCPmJ’   ‘~/tmp/scratch/RtmpAC7fCV’ ‘~/tmp/scratch/RtmpAN39eC’   ‘~/tmp/scratch/RtmpANqmbv’ ‘~/tmp/scratch/RtmpAts8Fp’   ‘~/tmp/scratch/RtmpBZDC1x’ ‘~/tmp/scratch/RtmpDYI5PS’   ‘~/tmp/scratch/RtmpDqNW7j’ ‘~/tmp/scratch/RtmpDxSARS’   ‘~/tmp/scratch/RtmpEF5nqo’ ‘~/tmp/scratch/RtmpEiOPll’   ‘~/tmp/scratch/RtmpFVRbC9’ ‘~/tmp/scratch/RtmpFcky2V’   ‘~/tmp/scratch/RtmpFoajQK’ ‘~/tmp/scratch/RtmpFoiw2F’   ‘~/tmp/scratch/RtmpFoooli’ ‘~/tmp/scratch/RtmpG6Te3c’   ‘~/tmp/scratch/RtmpHJoZGn’ ‘~/tmp/scratch/RtmpHk26K7’   ‘~/tmp/scratch/RtmpI34BXI’ ‘~/tmp/scratch/RtmpIG7t72’   ‘~/tmp/scratch/RtmpIGy8NS’ ‘~/tmp/scratch/RtmpIZFheB’   ‘~/tmp/scratch/RtmpJ3fQhi’ ‘~/tmp/scratch/RtmpJAF0KZ’   ‘~/tmp/scratch/RtmpJFZOZH’ ‘~/tmp/scratch/RtmpJuyzS9’   ‘~/tmp/scratch/RtmpKdmunQ’ ‘~/tmp/scratch/RtmpL78hfk’   ‘~/tmp/scratch/RtmpLU0xVo’ ‘~/tmp/scratch/RtmpLWCxEo’   ‘~/tmp/scratch/RtmpMOOMDb’ ‘~/tmp/scratch/RtmpO41xBl’   ‘~/tmp/scratch/RtmpQ6tNQm’ ‘~/tmp/scratch/RtmpQ8IZAj’   ‘~/tmp/scratch/RtmpQBD1iu’ ‘~/tmp/scratch/RtmpRDf5Ds’   ‘~/tmp/scratch/RtmpRYvbBr’ ‘~/tmp/scratch/RtmpS9UNfE’   ‘~/tmp/scratch/RtmpSQQ6rv’ ‘~/tmp/scratch/RtmpSeCXgk’   ‘~/tmp/scratch/RtmpT3V7II’ ‘~/tmp/scratch/RtmpTCTTvp’   ‘~/tmp/scratch/RtmpTu5di5’ ‘~/tmp/scratch/RtmpUNyUCX’   ‘~/tmp/scratch/RtmpVc1YwN’ ‘~/tmp/scratch/RtmpWsoBGM’   ‘~/tmp/scratch/RtmpXGqLbL’ ‘~/tmp/scratch/RtmpXpGqWA’   ‘~/tmp/scratch/RtmpY2H7wL’ ‘~/tmp/scratch/Rtmpa5tYFs’   ‘~/tmp/scratch/RtmpaJvGGc’ ‘~/tmp/scratch/Rtmpc000hq’   ‘~/tmp/scratch/RtmpcrAR32’ ‘~/tmp/scratch/Rtmpcrz1sl’   ‘~/tmp/scratch/Rtmpcv5bn5’ ‘~/tmp/scratch/RtmpdiSxBu’   ‘~/tmp/scratch/RtmpeaGxDu’ ‘~/tmp/scratch/Rtmpf8DISZ’   ‘~/tmp/scratch/RtmpfvSTm2’ ‘~/tmp/scratch/RtmpfvxCbq’   ‘~/tmp/scratch/Rtmpgw6siP’ ‘~/tmp/scratch/RtmphiM53E’   ‘~/tmp/scratch/RtmpiZR1i6’ ‘~/tmp/scratch/Rtmpixcppt’   ‘~/tmp/scratch/RtmpjIQR1X’ ‘~/tmp/scratch/RtmpjVwH6S’   ‘~/tmp/scratch/RtmpjY8fYX’ ‘~/tmp/scratch/RtmpjngOf6’   ‘~/tmp/scratch/RtmpkwUott’ ‘~/tmp/scratch/RtmplRmj30’   ‘~/tmp/scratch/RtmplrjrBG’ ‘~/tmp/scratch/RtmpmHmWaX’   ‘~/tmp/scratch/RtmpoGT3PT’ ‘~/tmp/scratch/RtmppPfprq’   ‘~/tmp/scratch/RtmppfvwlI’ ‘~/tmp/scratch/RtmprESwuL’   ‘~/tmp/scratch/RtmptBpCOg’ ‘~/tmp/scratch/RtmptI9v9x’   ‘~/tmp/scratch/Rtmpu9UnOI’ ‘~/tmp/scratch/RtmpuJXvPm’   ‘~/tmp/scratch/RtmpuP0cBt’ ‘~/tmp/scratch/RtmpuiTiLv’   ‘~/tmp/scratch/Rtmpvze89Q’ ‘~/tmp/scratch/RtmpwI4mzj’   ‘~/tmp/scratch/RtmpwhbFt6’ ‘~/tmp/scratch/RtmpwjZ1qr’   ‘~/tmp/scratch/RtmpyrD8hQ’ ‘~/tmp/scratch/RtmpzDxcLe’   ‘~/tmp/scratch/RtmpzcF9QA’ ‘~/tmp/scratch/Rtmpzy8bV3’   ‘~/tmp/scratch/RtmpzyJXuF’ ‘~/tmp/scratch/xvfb-run.07mpRg’   ‘~/tmp/scratch/xvfb-run.0f5FhT’ ‘~/tmp/scratch/xvfb-run.1efrQR’   ‘~/tmp/scratch/xvfb-run.46CBY7’ ‘~/tmp/scratch/xvfb-run.5WNOHV’   ‘~/tmp/scratch/xvfb-run.AdL9Le’ ‘~/tmp/scratch/xvfb-run.D4INRD’   ‘~/tmp/scratch/xvfb-run.EXWCmW’ ‘~/tmp/scratch/xvfb-run.FjQEyk’   ‘~/tmp/scratch/xvfb-run.GMx5nV’ ‘~/tmp/scratch/xvfb-run.IRDEAo’   ‘~/tmp/scratch/xvfb-run.J93vpY’ ‘~/tmp/scratch/xvfb-run.Km0Gd9’   ‘~/tmp/scratch/xvfb-run.LQ9VgJ’ ‘~/tmp/scratch/xvfb-run.LiPdXl’   ‘~/tmp/scratch/xvfb-run.LtO3ln’ ‘~/tmp/scratch/xvfb-run.MiiUyf’   ‘~/tmp/scratch/xvfb-run.NmOqX5’ ‘~/tmp/scratch/xvfb-run.NywCjZ’   ‘~/tmp/scratch/xvfb-run.Q3WsWr’ ‘~/tmp/scratch/xvfb-run.QiO3d6’   ‘~/tmp/scratch/xvfb-run.T8AVxm’ ‘~/tmp/scratch/xvfb-run.TIDdBq’   ‘~/tmp/scratch/xvfb-run.TNkCt0’ ‘~/tmp/scratch/xvfb-run.UrbuoP’   ‘~/tmp/scratch/xvfb-run.V9X5mS’ ‘~/tmp/scratch/xvfb-run.WMsqNl’   ‘~/tmp/scratch/xvfb-run.Xbg00X’ ‘~/tmp/scratch/xvfb-run.d0KwBH’   ‘~/tmp/scratch/xvfb-run.gRPCul’ ‘~/tmp/scratch/xvfb-run.gdkO0i’   ‘~/tmp/scratch/xvfb-run.hGR5cJ’ ‘~/tmp/scratch/xvfb-run.nVUA1Y’   ‘~/tmp/scratch/xvfb-run.tFniDd’ ‘~/tmp/scratch/xvfb-run.ts6Cw3’   ‘~/tmp/scratch/xvfb-run.vTmAAf’ ‘~/tmp/scratch/xvfb-run.yP0ZAr’
• DONE

Status: 1 NOTE