• using R Under development (unstable) (2025-03-20 r88016)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-14 (Debian 14.2.0-17) 14.2.0     GNU Fortran (Debian 14.2.0-17) 14.2.0
• running under: Debian GNU/Linux trixie/sid
• using session charset: UTF-8
• checking for file ‘FIESTA/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘FIESTA’ version ‘3.7.0’
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘FIESTA’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [2s/2s] OK
• checking whether the package can be loaded with stated dependencies ... [2s/2s] OK
• checking whether the package can be unloaded cleanly ... [2s/2s] OK
• checking whether the namespace can be loaded with stated dependencies ... [2s/2s] OK
• checking whether the namespace can be unloaded cleanly ... [2s/2s] OK
• checking loading without being on the library search path ... [2s/3s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [70s/81s] OK
• checking Rd files ... [1s/1s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [0s/0s] OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [7s/7s] OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [3s/4s] OK   Running ‘testthat.R’ [3s/3s]
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [99s/128s] ERROR Error(s) in re-building vignettes:   ... --- re-building ‘FIESTA_datSum_examples.Rmd’ using rmarkdown --- finished re-building ‘FIESTA_datSum_examples.Rmd’ --- re-building ‘FIESTA_manual_mod_est.Rmd’ using rmarkdown --- finished re-building ‘FIESTA_manual_mod_est.Rmd’ --- re-building ‘FIESTA_manual_mod_pop.Rmd’ using rmarkdown --- finished re-building ‘FIESTA_manual_mod_pop.Rmd’ --- re-building ‘FIESTA_tutorial_DB.Rmd’ using rmarkdown --- finished re-building ‘FIESTA_tutorial_DB.Rmd’ --- re-building ‘FIESTA_tutorial_GB.Rmd’ using rmarkdown Quitting from FIESTA_tutorial_GB.Rmd:293-308 [unnamed-chunk-10] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error: ! x must be character or SQL --- Backtrace:      ▆   1. └─FIESTA::DBqryCSV(qry, states = "Wyoming", sqltables = "POP_STRATUM")   2. └─sqldf::sqldf(sql, stringsAsFactors = FALSE)   3. ├─DBI::dbWriteTable(connection, nam, DF, row.names = row.names)   4. └─RSQLite::dbWriteTable(connection, nam, DF, row.names = row.names)   5. └─RSQLite (local) .local(conn, name, value, ...)   6. ├─DBI::dbCreateTable(...)   7. └─DBI::dbCreateTable(...)   8. ├─DBI::sqlCreateTable(...)   9. └─DBI::sqlCreateTable(...)  10. ├─DBI::dbQuoteIdentifier(con, names(fields))  11. └─DBI::dbQuoteIdentifier(con, names(fields)) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'FIESTA_tutorial_GB.Rmd' failed with diagnostics: x must be character or SQL --- failed re-building ‘FIESTA_tutorial_GB.Rmd’ --- re-building ‘FIESTA_tutorial_MA.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_MA_files/figure-html/unnamed-chunk-31-1.png 288x288 pixels, 8 bits/pixel, 255 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 4406 bytes Input file size = 5261 bytes Trying:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 3977   zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 3965   zc = 1 zm = 8 zs = 2 f = 0   zc = 9 zm = 8 zs = 3 f = 0   zc = 9 zm = 8 zs = 0 f = 5   zc = 9 zm = 8 zs = 1 f = 5   zc = 1 zm = 8 zs = 2 f = 5   zc = 9 zm = 8 zs = 3 f = 5                                 Selecting parameters:   zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 3965 Output IDAT size = 3965 bytes (441 bytes decrease) Output file size = 4043 bytes (1218 bytes = 23.15% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_MA_files/figure-html/unnamed-chunk-32-1.png 288x288 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 5789 bytes Input file size = 6647 bytes Trying:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 5355   zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 5313   zc = 1 zm = 8 zs = 2 f = 0   zc = 9 zm = 8 zs = 3 f = 0   zc = 9 zm = 8 zs = 0 f = 5   zc = 9 zm = 8 zs = 1 f = 5   zc = 1 zm = 8 zs = 2 f = 5   zc = 9 zm = 8 zs = 3 f = 5                                 Selecting parameters:   zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 5313 Output IDAT size = 5313 bytes (476 bytes decrease) Output file size = 5391 bytes (1256 bytes = 18.90% decrease) --- finished re-building ‘FIESTA_tutorial_MA.Rmd’ --- re-building ‘FIESTA_tutorial_PB.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_PB_files/figure-html/unnamed-chunk-11-1.png 288x288 pixels, 3x8 bits/pixel, RGB Input IDAT size = 26632 bytes Input file size = 26746 bytes Trying:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20718   zc = 9 zm = 8 zs = 1 f = 0   zc = 1 zm = 8 zs = 2 f = 0   zc = 9 zm = 8 zs = 3 f = 0   zc = 9 zm = 8 zs = 0 f = 5   zc = 9 zm = 8 zs = 1 f = 5   zc = 1 zm = 8 zs = 2 f = 5   zc = 9 zm = 8 zs = 3 f = 5                                 Selecting parameters:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20718 Output IDAT size = 20718 bytes (5914 bytes decrease) Output file size = 20796 bytes (5950 bytes = 22.25% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_PB_files/figure-html/unnamed-chunk-54-1.png 288x288 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 7380 bytes Input file size = 8238 bytes Trying:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6762   zc = 9 zm = 8 zs = 1 f = 0   zc = 1 zm = 8 zs = 2 f = 0   zc = 9 zm = 8 zs = 3 f = 0   zc = 9 zm = 8 zs = 0 f = 5   zc = 9 zm = 8 zs = 1 f = 5   zc = 1 zm = 8 zs = 2 f = 5   zc = 9 zm = 8 zs = 3 f = 5                                 Selecting parameters:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6762 Output IDAT size = 6762 bytes (618 bytes decrease) Output file size = 6840 bytes (1398 bytes = 16.97% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_PB_files/figure-html/unnamed-chunk-67-1.png 288x288 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 7270 bytes Input file size = 8128 bytes Trying:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6591   zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 6559   zc = 1 zm = 8 zs = 2 f = 0   zc = 9 zm = 8 zs = 3 f = 0   zc = 9 zm = 8 zs = 0 f = 5   zc = 9 zm = 8 zs = 1 f = 5   zc = 1 zm = 8 zs = 2 f = 5   zc = 9 zm = 8 zs = 3 f = 5                                 Selecting parameters:   zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 6559 Output IDAT size = 6559 bytes (711 bytes decrease) Output file size = 6637 bytes (1491 bytes = 18.34% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_PB_files/figure-html/unnamed-chunk-96-1.png 288x288 pixels, 3x8 bits/pixel, RGB Input IDAT size = 18316 bytes Input file size = 18418 bytes Trying:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14127   zc = 9 zm = 8 zs = 1 f = 0   zc = 1 zm = 8 zs = 2 f = 0   zc = 9 zm = 8 zs = 3 f = 0   zc = 9 zm = 8 zs = 0 f = 5   zc = 9 zm = 8 zs = 1 f = 5   zc = 1 zm = 8 zs = 2 f = 5   zc = 9 zm = 8 zs = 3 f = 5                                 Selecting parameters:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14127 Output IDAT size = 14127 bytes (4189 bytes decrease) Output file size = 14205 bytes (4213 bytes = 22.87% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_PB_files/figure-html/unnamed-chunk-116-1.png 288x288 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 5182 bytes Input file size = 6040 bytes Trying:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 4588   zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 4566   zc = 1 zm = 8 zs = 2 f = 0   zc = 9 zm = 8 zs = 3 f = 0   zc = 9 zm = 8 zs = 0 f = 5   zc = 9 zm = 8 zs = 1 f = 5   zc = 1 zm = 8 zs = 2 f = 5   zc = 9 zm = 8 zs = 3 f = 5                                 Selecting parameters:   zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 4566 Output IDAT size = 4566 bytes (616 bytes decrease) Output file size = 4644 bytes (1396 bytes = 23.11% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_PB_files/figure-html/unnamed-chunk-117-1.png 288x288 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 6639 bytes Input file size = 7497 bytes Trying:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6065   zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 6031   zc = 1 zm = 8 zs = 2 f = 0   zc = 9 zm = 8 zs = 3 f = 0   zc = 9 zm = 8 zs = 0 f = 5   zc = 9 zm = 8 zs = 1 f = 5   zc = 1 zm = 8 zs = 2 f = 5   zc = 9 zm = 8 zs = 3 f = 5                                 Selecting parameters:   zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 6031 Output IDAT size = 6031 bytes (608 bytes decrease) Output file size = 6109 bytes (1388 bytes = 18.51% decrease) --- finished re-building ‘FIESTA_tutorial_PB.Rmd’ --- re-building ‘FIESTA_tutorial_SA.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_SA_files/figure-html/unnamed-chunk-7-1.png 288x288 pixels, 3x8 bits/pixel, RGB Input IDAT size = 8691 bytes Input file size = 8781 bytes Trying:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7082   zc = 9 zm = 8 zs = 1 f = 0   zc = 1 zm = 8 zs = 2 f = 0   zc = 9 zm = 8 zs = 3 f = 0   zc = 9 zm = 8 zs = 0 f = 5   zc = 9 zm = 8 zs = 1 f = 5   zc = 1 zm = 8 zs = 2 f = 5   zc = 9 zm = 8 zs = 3 f = 5                                 Selecting parameters:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7082 Output IDAT size = 7082 bytes (1609 bytes decrease) Output file size = 7160 bytes (1621 bytes = 18.46% decrease) --- finished re-building ‘FIESTA_tutorial_SA.Rmd’ --- re-building ‘FIESTA_tutorial_dat.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_dat_files/figure-html/unnamed-chunk-37-1.png 288x288 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 7691 bytes Input file size = 8549 bytes Trying:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7165   zc = 9 zm = 8 zs = 1 f = 0   zc = 1 zm = 8 zs = 2 f = 0   zc = 9 zm = 8 zs = 3 f = 0   zc = 9 zm = 8 zs = 0 f = 5   zc = 9 zm = 8 zs = 1 f = 5   zc = 1 zm = 8 zs = 2 f = 5   zc = 9 zm = 8 zs = 3 f = 5                                 Selecting parameters:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7165 Output IDAT size = 7165 bytes (526 bytes decrease) Output file size = 7243 bytes (1306 bytes = 15.28% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_dat_files/figure-html/unnamed-chunk-37-2.png 288x288 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 7691 bytes Input file size = 8549 bytes Trying:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7165   zc = 9 zm = 8 zs = 1 f = 0   zc = 1 zm = 8 zs = 2 f = 0   zc = 9 zm = 8 zs = 3 f = 0   zc = 9 zm = 8 zs = 0 f = 5   zc = 9 zm = 8 zs = 1 f = 5   zc = 1 zm = 8 zs = 2 f = 5   zc = 9 zm = 8 zs = 3 f = 5                                 Selecting parameters:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7165 Output IDAT size = 7165 bytes (526 bytes decrease) Output file size = 7243 bytes (1306 bytes = 15.28% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_dat_files/figure-html/unnamed-chunk-38-1.png 288x288 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 7691 bytes Input file size = 8549 bytes Trying:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7165   zc = 9 zm = 8 zs = 1 f = 0   zc = 1 zm = 8 zs = 2 f = 0   zc = 9 zm = 8 zs = 3 f = 0   zc = 9 zm = 8 zs = 0 f = 5   zc = 9 zm = 8 zs = 1 f = 5   zc = 1 zm = 8 zs = 2 f = 5   zc = 9 zm = 8 zs = 3 f = 5                                 Selecting parameters:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7165 Output IDAT size = 7165 bytes (526 bytes decrease) Output file size = 7243 bytes (1306 bytes = 15.28% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_dat_files/figure-html/unnamed-chunk-38-2.png 288x288 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 7691 bytes Input file size = 8549 bytes Trying:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7165   zc = 9 zm = 8 zs = 1 f = 0   zc = 1 zm = 8 zs = 2 f = 0   zc = 9 zm = 8 zs = 3 f = 0   zc = 9 zm = 8 zs = 0 f = 5   zc = 9 zm = 8 zs = 1 f = 5   zc = 1 zm = 8 zs = 2 f = 5   zc = 9 zm = 8 zs = 3 f = 5                                 Selecting parameters:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7165 Output IDAT size = 7165 bytes (526 bytes decrease) Output file size = 7243 bytes (1306 bytes = 15.28% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_dat_files/figure-html/unnamed-chunk-40-1.png 288x288 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 4714 bytes Input file size = 5572 bytes Trying:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 4250   zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 4196   zc = 1 zm = 8 zs = 2 f = 0   zc = 9 zm = 8 zs = 3 f = 0   zc = 9 zm = 8 zs = 0 f = 5   zc = 9 zm = 8 zs = 1 f = 5   zc = 1 zm = 8 zs = 2 f = 5   zc = 9 zm = 8 zs = 3 f = 5                                 Selecting parameters:   zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 4196 Output IDAT size = 4196 bytes (518 bytes decrease) Output file size = 4274 bytes (1298 bytes = 23.30% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/FIESTA.Rcheck/vign_test/FIESTA/vignettes/FIESTA_tutorial_dat_files/figure-html/unnamed-chunk-40-2.png 288x288 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 4714 bytes Input file size = 5572 bytes Trying:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 4250   zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 4196   zc = 1 zm = 8 zs = 2 f = 0   zc = 9 zm = 8 zs = 3 f = 0   zc = 9 zm = 8 zs = 0 f = 5   zc = 9 zm = 8 zs = 1 f = 5   zc = 1 zm = 8 zs = 2 f = 5   zc = 9 zm = 8 zs = 3 f = 5                                 Selecting parameters:   zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 4196 Output IDAT size = 4196 bytes (518 bytes decrease) Output file size = 4274 bytes (1298 bytes = 23.30% decrease) --- finished re-building ‘FIESTA_tutorial_dat.Rmd’ --- re-building ‘FIESTA_tutorial_sp.Rmd’ using rmarkdown --- finished re-building ‘FIESTA_tutorial_sp.Rmd’ SUMMARY: processing the following file failed:   ‘FIESTA_tutorial_GB.Rmd’ Error: Vignette re-building failed. Execution halted
• checking PDF version of manual ... [10s/12s] OK
• checking HTML version of manual ... [4s/6s] OK
• checking for non-standard things in the check directory ... OK
• DONE

Status: 1 ERROR