• using R Under development (unstable) (2026-07-31 r90332)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-16 (Debian 16.1.0-3) 16.1.0     GNU Fortran (Debian 16.1.0-3) 16.1.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-08-01 11:38:58 UTC
• checking for file ‘EbayesThresh/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘EbayesThresh’ version ‘1.4-12’
• package encoding: UTF-8
• checking CRAN incoming feasibility ... [1s/2s] OK
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking serialization versions ... OK
• checking whether package ‘EbayesThresh’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [0s/0s] OK
• checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
• checking whether the package can be unloaded cleanly ... [0s/0s] OK
• checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
• checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
• checking loading without being on the library search path ... [0s/0s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [4s/7s] OK
• checking Rd files ... [0s/1s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [0s/1s] OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [1s/2s] OK   Running ‘testthat.R’ [1s/1s]
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [29s/41s] OK
• checking PDF version of manual ... [4s/7s] OK
• checking HTML version of manual ... [1s/1s] OK
• checking for non-standard things in the check directory ... OK
• checking for new files in some other directories ... NOTE Found the following files/directories:   ‘~/tmp/scratch/Rtmp003eMC’ ‘~/tmp/scratch/Rtmp0DtCGC’   ‘~/tmp/scratch/Rtmp0XQC4a’ ‘~/tmp/scratch/Rtmp0fvT5l’   ‘~/tmp/scratch/Rtmp0xwLO4’ ‘~/tmp/scratch/Rtmp1EHO8k’   ‘~/tmp/scratch/Rtmp1cEaBJ’ ‘~/tmp/scratch/Rtmp2OrfKg’   ‘~/tmp/scratch/Rtmp3Ig8jS’ ‘~/tmp/scratch/Rtmp3PRl9V’   ‘~/tmp/scratch/Rtmp3e9K8s’ ‘~/tmp/scratch/Rtmp3p7win’   ‘~/tmp/scratch/Rtmp3wEWht’ ‘~/tmp/scratch/Rtmp4bmLy2’   ‘~/tmp/scratch/Rtmp591Hhd’ ‘~/tmp/scratch/Rtmp6c2OM0’   ‘~/tmp/scratch/Rtmp7CFNSY’ ‘~/tmp/scratch/Rtmp7UxNQf’   ‘~/tmp/scratch/Rtmp7mUiJK’ ‘~/tmp/scratch/Rtmp8Bycxg’   ‘~/tmp/scratch/RtmpAhOzRq’ ‘~/tmp/scratch/RtmpAimbWf’   ‘~/tmp/scratch/RtmpB6JalP’ ‘~/tmp/scratch/RtmpBCUkEP’   ‘~/tmp/scratch/RtmpBRXovB’ ‘~/tmp/scratch/RtmpBSRwHu’   ‘~/tmp/scratch/RtmpBTbWMj’ ‘~/tmp/scratch/RtmpBfJmkO’   ‘~/tmp/scratch/RtmpBwJpDG’ ‘~/tmp/scratch/RtmpC8Rj3t’   ‘~/tmp/scratch/RtmpCAj5gL’ ‘~/tmp/scratch/RtmpDX1jYJ’   ‘~/tmp/scratch/RtmpDYhkVX’ ‘~/tmp/scratch/RtmpDdMDbP’   ‘~/tmp/scratch/RtmpEU1VeT’ ‘~/tmp/scratch/RtmpF7spv8’   ‘~/tmp/scratch/RtmpFW8kbG’ ‘~/tmp/scratch/RtmpFrbqn5’   ‘~/tmp/scratch/RtmpGEp32y’ ‘~/tmp/scratch/RtmpHpxest’   ‘~/tmp/scratch/RtmpIOGHMZ’ ‘~/tmp/scratch/RtmpIOZs0a’   ‘~/tmp/scratch/RtmpIP1ZH4’ ‘~/tmp/scratch/RtmpIkTQNP’   ‘~/tmp/scratch/RtmpJ5fJNO’ ‘~/tmp/scratch/RtmpJFYsPL’   ‘~/tmp/scratch/RtmpJK2IWH’ ‘~/tmp/scratch/RtmpJuXEq1’   ‘~/tmp/scratch/RtmpLmJYus’ ‘~/tmp/scratch/RtmpMOoqOj’   ‘~/tmp/scratch/RtmpMTRFxl’ ‘~/tmp/scratch/RtmpMjNMPx’   ‘~/tmp/scratch/RtmpMtz9r5’ ‘~/tmp/scratch/RtmpNFI2zu’   ‘~/tmp/scratch/RtmpNSgald’ ‘~/tmp/scratch/RtmpNalxXi’   ‘~/tmp/scratch/RtmpNhDlpQ’ ‘~/tmp/scratch/RtmpOAr4Iq’   ‘~/tmp/scratch/RtmpOBGo5Z’ ‘~/tmp/scratch/RtmpOFbXiv’   ‘~/tmp/scratch/RtmpP5830U’ ‘~/tmp/scratch/RtmpPQf2mJ’   ‘~/tmp/scratch/RtmpPXcFx8’ ‘~/tmp/scratch/RtmpPfviHw’   ‘~/tmp/scratch/RtmpPswbmk’ ‘~/tmp/scratch/RtmpQJC9BT’   ‘~/tmp/scratch/RtmpQWBgDS’ ‘~/tmp/scratch/RtmpRWwPIM’   ‘~/tmp/scratch/RtmpSlzzNy’ ‘~/tmp/scratch/RtmpSo9kZm’   ‘~/tmp/scratch/RtmpTNyJBU’ ‘~/tmp/scratch/RtmpTqCtHg’   ‘~/tmp/scratch/RtmpU0ZDzr’ ‘~/tmp/scratch/RtmpVwQzNf’   ‘~/tmp/scratch/RtmpWK7Hjg’ ‘~/tmp/scratch/RtmpWuo3wQ’   ‘~/tmp/scratch/RtmpXOqq2W’ ‘~/tmp/scratch/RtmpaU6zmE’   ‘~/tmp/scratch/RtmpahAzNf’ ‘~/tmp/scratch/RtmpamOYQ8’   ‘~/tmp/scratch/Rtmpb3dCia’ ‘~/tmp/scratch/Rtmpc2T5Ea’   ‘~/tmp/scratch/RtmpdVwgIt’ ‘~/tmp/scratch/RtmpdoDDNS’   ‘~/tmp/scratch/RtmpdzTvpL’ ‘~/tmp/scratch/Rtmpejfj19’   ‘~/tmp/scratch/RtmpfDgWPv’ ‘~/tmp/scratch/RtmpfsOv9D’   ‘~/tmp/scratch/RtmpfwmEB5’ ‘~/tmp/scratch/RtmpgTdT2j’   ‘~/tmp/scratch/RtmpgVTqpf’ ‘~/tmp/scratch/RtmphAfA0K’   ‘~/tmp/scratch/RtmphtAAWs’ ‘~/tmp/scratch/Rtmpi4QVfl’   ‘~/tmp/scratch/Rtmpify0ct’ ‘~/tmp/scratch/RtmpkStGmD’   ‘~/tmp/scratch/RtmpkfEzoT’ ‘~/tmp/scratch/RtmplI2Arf’   ‘~/tmp/scratch/RtmpleEicf’ ‘~/tmp/scratch/Rtmplm3plm’   ‘~/tmp/scratch/RtmpmheJ0J’ ‘~/tmp/scratch/RtmpnEwoO1’   ‘~/tmp/scratch/RtmpnLe7SK’ ‘~/tmp/scratch/RtmppB7qkK’   ‘~/tmp/scratch/RtmppWiWAo’ ‘~/tmp/scratch/RtmpqxCr7b’   ‘~/tmp/scratch/RtmprfucZm’ ‘~/tmp/scratch/RtmprjJCGZ’   ‘~/tmp/scratch/RtmpsfBrrA’ ‘~/tmp/scratch/RtmpshHZsz’   ‘~/tmp/scratch/Rtmpt3nsDa’ ‘~/tmp/scratch/Rtmpt8yIz2’   ‘~/tmp/scratch/RtmptDCgiQ’ ‘~/tmp/scratch/RtmpuP88ee’   ‘~/tmp/scratch/Rtmpuc76bp’ ‘~/tmp/scratch/RtmpugyBRs’   ‘~/tmp/scratch/RtmpvhYnUq’ ‘~/tmp/scratch/Rtmpvle5RS’   ‘~/tmp/scratch/RtmpvxiNAk’ ‘~/tmp/scratch/RtmpwmHv4I’   ‘~/tmp/scratch/RtmpwmkuL2’ ‘~/tmp/scratch/Rtmpx2kYhQ’   ‘~/tmp/scratch/RtmpxOuMxY’ ‘~/tmp/scratch/Rtmpy1y60h’   ‘~/tmp/scratch/RtmpyXppXT’ ‘~/tmp/scratch/RtmpyuQGTD’   ‘~/tmp/scratch/RtmpzWfp3p’ ‘~/tmp/scratch/xvfb-run.09EbUR’   ‘~/tmp/scratch/xvfb-run.2CKHZ0’ ‘~/tmp/scratch/xvfb-run.2NsOuz’   ‘~/tmp/scratch/xvfb-run.2iERiq’ ‘~/tmp/scratch/xvfb-run.3zXK1a’   ‘~/tmp/scratch/xvfb-run.5c1uGw’ ‘~/tmp/scratch/xvfb-run.7skETx’   ‘~/tmp/scratch/xvfb-run.8SJ11d’ ‘~/tmp/scratch/xvfb-run.9AgdxM’   ‘~/tmp/scratch/xvfb-run.9OabHL’ ‘~/tmp/scratch/xvfb-run.9bCZ4M’   ‘~/tmp/scratch/xvfb-run.B7IakU’ ‘~/tmp/scratch/xvfb-run.Ccywb5’   ‘~/tmp/scratch/xvfb-run.ETVcCW’ ‘~/tmp/scratch/xvfb-run.HHVYxB’   ‘~/tmp/scratch/xvfb-run.IZOu0j’ ‘~/tmp/scratch/xvfb-run.ItOGMp’   ‘~/tmp/scratch/xvfb-run.J4eZ7j’ ‘~/tmp/scratch/xvfb-run.JdOVxq’   ‘~/tmp/scratch/xvfb-run.KNQKtX’ ‘~/tmp/scratch/xvfb-run.MFwqcQ’   ‘~/tmp/scratch/xvfb-run.N0jVTi’ ‘~/tmp/scratch/xvfb-run.NOARqz’   ‘~/tmp/scratch/xvfb-run.O8IAt8’ ‘~/tmp/scratch/xvfb-run.PzqPRF’   ‘~/tmp/scratch/xvfb-run.RvsP4J’ ‘~/tmp/scratch/xvfb-run.TCrvLg’   ‘~/tmp/scratch/xvfb-run.VWav0x’ ‘~/tmp/scratch/xvfb-run.YELZvi’   ‘~/tmp/scratch/xvfb-run.ZJPiG3’ ‘~/tmp/scratch/xvfb-run.aGjisM’   ‘~/tmp/scratch/xvfb-run.evj0Aw’ ‘~/tmp/scratch/xvfb-run.fIraJC’   ‘~/tmp/scratch/xvfb-run.gEOPQV’ ‘~/tmp/scratch/xvfb-run.gMtuiZ’   ‘~/tmp/scratch/xvfb-run.gdblje’ ‘~/tmp/scratch/xvfb-run.gncYMq’   ‘~/tmp/scratch/xvfb-run.gsQyAk’ ‘~/tmp/scratch/xvfb-run.hUC2oT’   ‘~/tmp/scratch/xvfb-run.kixHDN’ ‘~/tmp/scratch/xvfb-run.llHaqF’   ‘~/tmp/scratch/xvfb-run.nNjzEJ’ ‘~/tmp/scratch/xvfb-run.o4iMt1’   ‘~/tmp/scratch/xvfb-run.pRij4Y’ ‘~/tmp/scratch/xvfb-run.rCCxFw’   ‘~/tmp/scratch/xvfb-run.rRiq6G’ ‘~/tmp/scratch/xvfb-run.tLqXwy’   ‘~/tmp/scratch/xvfb-run.xJ1tsw’ ‘~/tmp/scratch/xvfb-run.xiXJ99’   ‘~/tmp/scratch/xvfb-run.ylChvA’ ‘~/tmp/scratch/xvfb-run.zNRQix’
• DONE

Status: 1 NOTE