• using R Under development (unstable) (2025-10-19 r88945)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-15 (Debian 15.2.0-4) 15.2.0     GNU Fortran (Debian 15.2.0-4) 15.2.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8
• checking for file ‘DrugExposureDiagnostics/DESCRIPTION’ ... OK
• this is package ‘DrugExposureDiagnostics’ version ‘1.1.5’
• package encoding: UTF-8
• checking CRAN incoming feasibility ... [1s/1s] OK
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘DrugExposureDiagnostics’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [0s/0s] OK
• checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
• checking whether the package can be unloaded cleanly ... [0s/1s] OK
• checking whether the namespace can be loaded with stated dependencies ... [0s/1s] OK
• checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
• checking loading without being on the library search path ... [0s/1s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [6s/8s] OK
• checking Rd files ... [0s/0s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [0s/1s] OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [286s/411s] OK   Running ‘testthat.R’ [286s/410s]
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [123s/170s] OK
• checking PDF version of manual ... [5s/8s] OK
• checking HTML version of manual ... [1s/2s] NOTE Found the following HTML validation problems: ShinyApp.html:144:1 (ShinyApp.Rd:73): Warning: missing </ul> before </div> ShinyApp.html:121:1 (ShinyApp.Rd:62): Warning: <h5> anchor "Usage" already defined ShinyApp.html:127:1 (ShinyApp.Rd:66): Warning: <h5> anchor "Arguments" already defined ShinyModule.html:224:1 (ShinyModule.Rd:122): Warning: missing </ul> before </div> ShinyModule.html:115:1 (ShinyModule.Rd:61): Warning: <h5> anchor "Usage" already defined ShinyModule.html:121:1 (ShinyModule.Rd:65): Warning: <h5> anchor "Returns" already defined ShinyModule.html:138:1 (ShinyModule.Rd:74): Warning: <h5> anchor "Usage" already defined ShinyModule.html:144:1 (ShinyModule.Rd:78): Warning: <h5> anchor "Returns" already defined ShinyModule.html:161:1 (ShinyModule.Rd:87): Warning: <h5> anchor "Usage" already defined ShinyModule.html:184:1 (ShinyModule.Rd:102): Warning: <h5> anchor "Returns" already defined ShinyModule.html:201:1 (ShinyModule.Rd:111): Warning: <h5> anchor "Usage" already defined ShinyModule.html:207:1 (ShinyModule.Rd:115): Warning: <h5> anchor "Arguments" already defined checkDbType.html:54:1 (checkDbType.Rd:14): Warning: missing </ul> before </div> checkIngredientInTable.html:58:1 (checkIngredientInTable.Rd:16): Warning: missing </ul> before </div> checkIsIngredient.html:54:1 (checkIsIngredient.Rd:14): Warning: missing </ul> before </div> checkLogical.html:54:1 (checkLogical.Rd:14): Warning: missing </ul> before </div> checkSampleMinCellCount.html:54:1 (checkSampleMinCellCount.Rd:14): Warning: missing </ul> before </div> checkTableExists.html:54:1 (checkTableExists.Rd:14): Warning: missing </ul> before </div> dataPlotPanel.html:197:1 (dataPlotPanel.Rd:119): Warning: missing </ul> before </div> dataPlotPanel.html:151:1 (dataPlotPanel.Rd:95): Warning: <h5> anchor "Usage" already defined dataPlotPanel.html:157:1 (dataPlotPanel.Rd:99): Warning: <h5> anchor "Returns" already defined dataPlotPanel.html:174:1 (dataPlotPanel.Rd:108): Warning: <h5> anchor "Usage" already defined dataPlotPanel.html:180:1 (dataPlotPanel.Rd:112): Warning: <h5> anchor "Arguments" already defined metaDataPanel.html:179:1 (metaDataPanel.Rd:101): Warning: missing </ul> before </div> metaDataPanel.html:133:1 (metaDataPanel.Rd:77): Warning: <h5> anchor "Usage" already defined metaDataPanel.html:139:1 (metaDataPanel.Rd:81): Warning: <h5> anchor "Returns" already defined metaDataPanel.html:156:1 (metaDataPanel.Rd:90): Warning: <h5> anchor "Usage" already defined metaDataPanel.html:162:1 (metaDataPanel.Rd:94): Warning: <h5> anchor "Arguments" already defined validateChecks.html:50:1 (validateChecks.Rd:12): Warning: missing </ul> before </div>
• checking for non-standard things in the check directory ... OK
• DONE

Status: 1 NOTE