• using R Under development (unstable) (2026-07-30 r90327)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-16 (Debian 16.1.0-3) 16.1.0     GNU Fortran (Debian 16.1.0-3) 16.1.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-07-31 11:34:03 UTC
• checking for file ‘DiPhiSeq/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘DiPhiSeq’ version ‘0.2.0’
• package encoding: UTF-8
• checking CRAN incoming feasibility ... [1s/1s] OK
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking serialization versions ... OK
• checking whether package ‘DiPhiSeq’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [0s/0s] OK
• checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
• checking whether the package can be unloaded cleanly ... [0s/0s] OK
• checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
• checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
• checking loading without being on the library search path ... [0s/0s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [4s/5s] OK
• checking Rd files ... [0s/0s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [0s/0s] OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking examples ... [2s/2s] OK
• checking PDF version of manual ... [4s/5s] OK
• checking HTML version of manual ... [0s/0s] OK
• checking for non-standard things in the check directory ... OK
• checking for new files in some other directories ... NOTE Found the following files/directories:   ‘~/tmp/scratch/Rtmp09tFnd’ ‘~/tmp/scratch/Rtmp1BzLuE’   ‘~/tmp/scratch/Rtmp1juF6w’ ‘~/tmp/scratch/Rtmp4QXnhB’   ‘~/tmp/scratch/Rtmp5hh3sH’ ‘~/tmp/scratch/Rtmp6K7QYH’   ‘~/tmp/scratch/Rtmp7EvOMc’ ‘~/tmp/scratch/Rtmp9AbjAu’   ‘~/tmp/scratch/Rtmp9g7dmm’ ‘~/tmp/scratch/Rtmp9yg0CB’   ‘~/tmp/scratch/RtmpA43gvX’ ‘~/tmp/scratch/RtmpB61S98’   ‘~/tmp/scratch/RtmpBiPmhU’ ‘~/tmp/scratch/RtmpCaY5Ne’   ‘~/tmp/scratch/RtmpCxUEdQ’ ‘~/tmp/scratch/RtmpDEyDni’   ‘~/tmp/scratch/RtmpDM9VRL’ ‘~/tmp/scratch/RtmpDsPojd’   ‘~/tmp/scratch/RtmpEqmJ2W’ ‘~/tmp/scratch/RtmpH0nB3Y’   ‘~/tmp/scratch/RtmpHup4sx’ ‘~/tmp/scratch/RtmpItGXL4’   ‘~/tmp/scratch/RtmpJId8ZH’ ‘~/tmp/scratch/RtmpJuqq7S’   ‘~/tmp/scratch/RtmpKaSzlW’ ‘~/tmp/scratch/RtmpKcr3wM’   ‘~/tmp/scratch/RtmpKut6wM’ ‘~/tmp/scratch/RtmpLcUYIn’   ‘~/tmp/scratch/RtmpLkk6y2’ ‘~/tmp/scratch/RtmpQe7E2N’   ‘~/tmp/scratch/RtmpQp0514’ ‘~/tmp/scratch/RtmpS9utbz’   ‘~/tmp/scratch/RtmpTwPZ6Z’ ‘~/tmp/scratch/RtmpTxex6s’   ‘~/tmp/scratch/RtmpUPmzRQ’ ‘~/tmp/scratch/RtmpVFX4tX’   ‘~/tmp/scratch/RtmpVWUiFK’ ‘~/tmp/scratch/RtmpVflOnD’   ‘~/tmp/scratch/RtmpW2R4km’ ‘~/tmp/scratch/RtmpWGRUwA’   ‘~/tmp/scratch/RtmpWjPuUP’ ‘~/tmp/scratch/RtmpWx7JLj’   ‘~/tmp/scratch/RtmpXAd3vQ’ ‘~/tmp/scratch/RtmpYhdDbj’   ‘~/tmp/scratch/RtmpYtjJHf’ ‘~/tmp/scratch/RtmpZKPnR5’   ‘~/tmp/scratch/Rtmpb8gRlU’ ‘~/tmp/scratch/RtmpcUhk3u’   ‘~/tmp/scratch/RtmpcVATiF’ ‘~/tmp/scratch/RtmpdhwkLi’   ‘~/tmp/scratch/RtmpdkueZM’ ‘~/tmp/scratch/RtmpdlpzeV’   ‘~/tmp/scratch/Rtmpe6rKD7’ ‘~/tmp/scratch/Rtmpf1kbYa’   ‘~/tmp/scratch/Rtmpf9VAvg’ ‘~/tmp/scratch/RtmpfOOygf’   ‘~/tmp/scratch/Rtmpfl7R7H’ ‘~/tmp/scratch/RtmpgpKk4B’   ‘~/tmp/scratch/Rtmph6QAt7’ ‘~/tmp/scratch/RtmphLKYlI’   ‘~/tmp/scratch/RtmphVKl3H’ ‘~/tmp/scratch/RtmpiII2gF’   ‘~/tmp/scratch/Rtmpj9aRaF’ ‘~/tmp/scratch/RtmpjPtbzd’   ‘~/tmp/scratch/RtmpjjYLjy’ ‘~/tmp/scratch/Rtmpk4zAYT’   ‘~/tmp/scratch/Rtmpk9XiZW’ ‘~/tmp/scratch/RtmplU56WU’   ‘~/tmp/scratch/RtmpllDI08’ ‘~/tmp/scratch/Rtmpmzr2LJ’   ‘~/tmp/scratch/RtmpnZja2c’ ‘~/tmp/scratch/RtmponnKkX’   ‘~/tmp/scratch/RtmppLK5o5’ ‘~/tmp/scratch/Rtmpprd0Kn’   ‘~/tmp/scratch/Rtmpq5XG8v’ ‘~/tmp/scratch/Rtmpr1I6M9’   ‘~/tmp/scratch/Rtmpr6Webe’ ‘~/tmp/scratch/RtmprmzFTK’   ‘~/tmp/scratch/Rtmps9vwU7’ ‘~/tmp/scratch/RtmpscfOKC’   ‘~/tmp/scratch/RtmpsngFpb’ ‘~/tmp/scratch/RtmptTmvj7’   ‘~/tmp/scratch/RtmptZYKdC’ ‘~/tmp/scratch/Rtmptahb05’   ‘~/tmp/scratch/RtmptoFH5r’ ‘~/tmp/scratch/Rtmptsd5bX’   ‘~/tmp/scratch/RtmptvAKwz’ ‘~/tmp/scratch/RtmpuZjoIu’   ‘~/tmp/scratch/RtmpwhFZLW’ ‘~/tmp/scratch/RtmpwwuQZc’   ‘~/tmp/scratch/Rtmpx4ij0A’ ‘~/tmp/scratch/RtmpxE0yTl’   ‘~/tmp/scratch/RtmpxHHdQC’ ‘~/tmp/scratch/RtmpxtV6CV’   ‘~/tmp/scratch/RtmpyXSJh7’ ‘~/tmp/scratch/xvfb-run.29x4v2’   ‘~/tmp/scratch/xvfb-run.3N4AOD’ ‘~/tmp/scratch/xvfb-run.4ZzYOx’   ‘~/tmp/scratch/xvfb-run.61uTjT’ ‘~/tmp/scratch/xvfb-run.93VjJX’   ‘~/tmp/scratch/xvfb-run.Gz51mZ’ ‘~/tmp/scratch/xvfb-run.HatsMn’   ‘~/tmp/scratch/xvfb-run.Ks87K7’ ‘~/tmp/scratch/xvfb-run.QMF7Ub’   ‘~/tmp/scratch/xvfb-run.UZNHvw’ ‘~/tmp/scratch/xvfb-run.Wd8nCn’   ‘~/tmp/scratch/xvfb-run.XMmWJ6’ ‘~/tmp/scratch/xvfb-run.ZfB3Yi’   ‘~/tmp/scratch/xvfb-run.dR9fGA’ ‘~/tmp/scratch/xvfb-run.greXD8’   ‘~/tmp/scratch/xvfb-run.h7DQm5’ ‘~/tmp/scratch/xvfb-run.kE4h7X’   ‘~/tmp/scratch/xvfb-run.odKsF3’ ‘~/tmp/scratch/xvfb-run.pCM5xP’   ‘~/tmp/scratch/xvfb-run.qIKud2’ ‘~/tmp/scratch/xvfb-run.qhrqx8’   ‘~/tmp/scratch/xvfb-run.qnF1WV’ ‘~/tmp/scratch/xvfb-run.vo9poA’   ‘~/tmp/scratch/xvfb-run.wybvrg’ ‘~/tmp/scratch/xvfb-run.yNq0Qh’   ‘~/tmp/scratch/xvfb-run.zOCftO’
• DONE

Status: 1 NOTE