• using R Under development (unstable) (2026-07-30 r90327)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-16 (Debian 16.1.0-3) 16.1.0     GNU Fortran (Debian 16.1.0-3) 16.1.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-07-31 11:31:44 UTC
• checking for file ‘DSMolgenisArmadillo/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘DSMolgenisArmadillo’ version ‘4.0.1’
• package encoding: UTF-8
• checking CRAN incoming feasibility ... [2s/2s] OK
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘DSMolgenisArmadillo’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [1s/2s] OK
• checking whether the package can be loaded with stated dependencies ... [1s/2s] OK
• checking whether the package can be unloaded cleanly ... [1s/1s] OK
• checking whether the namespace can be loaded with stated dependencies ... [1s/1s] OK
• checking whether the namespace can be unloaded cleanly ... [1s/1s] OK
• checking loading without being on the library search path ... [1s/2s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [7s/9s] OK
• checking Rd files ... [0s/1s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [1s/2s] OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [4s/6s] OK   Running ‘testthat.R’ [4s/6s]
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [4s/6s] OK
• checking PDF version of manual ... [4s/6s] OK
• checking HTML version of manual ... [1s/1s] OK
• checking for non-standard things in the check directory ... OK
• checking for new files in some other directories ... NOTE Found the following files/directories:   ‘~/tmp/scratch/Rtmp0Xc2oU’ ‘~/tmp/scratch/Rtmp0uu3LY’   ‘~/tmp/scratch/Rtmp1VHAbC’ ‘~/tmp/scratch/Rtmp2XLUYD’   ‘~/tmp/scratch/Rtmp2bI06Y’ ‘~/tmp/scratch/Rtmp2hPLBk’   ‘~/tmp/scratch/Rtmp3tGaHS’ ‘~/tmp/scratch/Rtmp50Si06’   ‘~/tmp/scratch/Rtmp5W7Z7g’ ‘~/tmp/scratch/Rtmp5cPyM5’   ‘~/tmp/scratch/Rtmp5wbgRC’ ‘~/tmp/scratch/Rtmp6jkIPM’   ‘~/tmp/scratch/Rtmp6x6RKF’ ‘~/tmp/scratch/Rtmp71fajp’   ‘~/tmp/scratch/Rtmp74wLsF’ ‘~/tmp/scratch/Rtmp7GHsNX’   ‘~/tmp/scratch/Rtmp7VpkCl’ ‘~/tmp/scratch/Rtmp7joVbt’   ‘~/tmp/scratch/Rtmp7phfjS’ ‘~/tmp/scratch/Rtmp94Mysz’   ‘~/tmp/scratch/RtmpASFHpm’ ‘~/tmp/scratch/RtmpC7hDxd’   ‘~/tmp/scratch/RtmpCYk04e’ ‘~/tmp/scratch/RtmpCvWzRk’   ‘~/tmp/scratch/RtmpDIWQKz’ ‘~/tmp/scratch/RtmpDZotFJ’   ‘~/tmp/scratch/RtmpFZczVd’ ‘~/tmp/scratch/RtmpFtAlwb’   ‘~/tmp/scratch/RtmpFxh3oz’ ‘~/tmp/scratch/RtmpGQCcZ0’   ‘~/tmp/scratch/RtmpHNwqGn’ ‘~/tmp/scratch/RtmpHjxI2h’   ‘~/tmp/scratch/RtmpI21jri’ ‘~/tmp/scratch/RtmpJ50RLm’   ‘~/tmp/scratch/RtmpKNXgwG’ ‘~/tmp/scratch/RtmpMYqin4’   ‘~/tmp/scratch/RtmpNuYlYK’ ‘~/tmp/scratch/RtmpO0pINM’   ‘~/tmp/scratch/RtmpO9mNdr’ ‘~/tmp/scratch/RtmpOAVZbX’   ‘~/tmp/scratch/RtmpOPu9FL’ ‘~/tmp/scratch/RtmpP1pccn’   ‘~/tmp/scratch/RtmpP2dzkf’ ‘~/tmp/scratch/RtmpPfS921’   ‘~/tmp/scratch/RtmpPwrcpK’ ‘~/tmp/scratch/RtmpPxM3u9’   ‘~/tmp/scratch/RtmpQI64AR’ ‘~/tmp/scratch/RtmpQeeZVK’   ‘~/tmp/scratch/RtmpRALTsj’ ‘~/tmp/scratch/RtmpRCHgsn’   ‘~/tmp/scratch/RtmpS7Mmi7’ ‘~/tmp/scratch/RtmpSEfPSo’   ‘~/tmp/scratch/RtmpSGw9iB’ ‘~/tmp/scratch/RtmpSy9xQu’   ‘~/tmp/scratch/RtmpTKlQ0f’ ‘~/tmp/scratch/RtmpTXaEgN’   ‘~/tmp/scratch/RtmpTkbTyM’ ‘~/tmp/scratch/RtmpURgQBY’   ‘~/tmp/scratch/RtmpUq59na’ ‘~/tmp/scratch/RtmpV0a9xn’   ‘~/tmp/scratch/RtmpV3MUtg’ ‘~/tmp/scratch/RtmpVH3eDd’   ‘~/tmp/scratch/RtmpWK6F64’ ‘~/tmp/scratch/RtmpWMNURh’   ‘~/tmp/scratch/RtmpWc51I0’ ‘~/tmp/scratch/RtmpWprf1t’   ‘~/tmp/scratch/RtmpY8ajLg’ ‘~/tmp/scratch/RtmpYVhKjY’   ‘~/tmp/scratch/RtmpZd7WQy’ ‘~/tmp/scratch/RtmpZkHcvP’   ‘~/tmp/scratch/RtmpZq8pC3’ ‘~/tmp/scratch/RtmpZtvXiq’   ‘~/tmp/scratch/RtmpaHoaO2’ ‘~/tmp/scratch/RtmpaSiM5G’   ‘~/tmp/scratch/RtmpagSrq4’ ‘~/tmp/scratch/RtmpauRJU7’   ‘~/tmp/scratch/RtmpavC9fj’ ‘~/tmp/scratch/RtmpavE1RK’   ‘~/tmp/scratch/Rtmpb6Erf4’ ‘~/tmp/scratch/RtmpbjlJsD’   ‘~/tmp/scratch/RtmpbpPy4Z’ ‘~/tmp/scratch/Rtmpbx0peN’   ‘~/tmp/scratch/RtmpdKVIWf’ ‘~/tmp/scratch/Rtmpe1bqo0’   ‘~/tmp/scratch/RtmperBjt3’ ‘~/tmp/scratch/RtmpfoL3nA’   ‘~/tmp/scratch/RtmpgDnxxj’ ‘~/tmp/scratch/RtmpgH81Lo’   ‘~/tmp/scratch/RtmpgekYWV’ ‘~/tmp/scratch/RtmpgjLk3T’   ‘~/tmp/scratch/Rtmph6AmN3’ ‘~/tmp/scratch/Rtmph9eQ0K’   ‘~/tmp/scratch/RtmphxmBhT’ ‘~/tmp/scratch/Rtmpi0ia5r’   ‘~/tmp/scratch/RtmpiVsS7M’ ‘~/tmp/scratch/RtmpjeSDVL’   ‘~/tmp/scratch/RtmpjoQEHX’ ‘~/tmp/scratch/RtmpjttIf9’   ‘~/tmp/scratch/RtmpkTp3UR’ ‘~/tmp/scratch/RtmpkXiRHu’   ‘~/tmp/scratch/RtmpkrdFCO’ ‘~/tmp/scratch/Rtmpl6E2vE’   ‘~/tmp/scratch/RtmplMRKGN’ ‘~/tmp/scratch/RtmpmVM6Gi’   ‘~/tmp/scratch/RtmpnL3cRy’ ‘~/tmp/scratch/RtmpnZSF5i’   ‘~/tmp/scratch/RtmpnpWYn5’ ‘~/tmp/scratch/RtmpnqqfYY’   ‘~/tmp/scratch/RtmpnxZ20M’ ‘~/tmp/scratch/RtmpoIsKI3’   ‘~/tmp/scratch/RtmppsItvf’ ‘~/tmp/scratch/Rtmpqcu9D7’   ‘~/tmp/scratch/RtmprZNURH’ ‘~/tmp/scratch/RtmprkPZAa’   ‘~/tmp/scratch/Rtmprqi67K’ ‘~/tmp/scratch/Rtmpul109A’   ‘~/tmp/scratch/Rtmpuvtr9q’ ‘~/tmp/scratch/Rtmpv4M6hq’   ‘~/tmp/scratch/RtmpvmyPoK’ ‘~/tmp/scratch/RtmpxY2EJB’   ‘~/tmp/scratch/RtmpxYhZ4N’ ‘~/tmp/scratch/RtmpxpdXJ5’   ‘~/tmp/scratch/Rtmpy0ABZm’ ‘~/tmp/scratch/RtmpyEuwE9’   ‘~/tmp/scratch/RtmpyIhxaz’ ‘~/tmp/scratch/Rtmpzp7MhZ’   ‘~/tmp/scratch/xvfb-run.0qOggI’ ‘~/tmp/scratch/xvfb-run.0w7y5Q’   ‘~/tmp/scratch/xvfb-run.1GgxcO’ ‘~/tmp/scratch/xvfb-run.36lhQr’   ‘~/tmp/scratch/xvfb-run.39FSzQ’ ‘~/tmp/scratch/xvfb-run.5lSNe0’   ‘~/tmp/scratch/xvfb-run.6LJA1h’ ‘~/tmp/scratch/xvfb-run.6TaqVo’   ‘~/tmp/scratch/xvfb-run.8P33cc’ ‘~/tmp/scratch/xvfb-run.8nZ8GY’   ‘~/tmp/scratch/xvfb-run.8zhyxU’ ‘~/tmp/scratch/xvfb-run.910et1’   ‘~/tmp/scratch/xvfb-run.9fLRgZ’ ‘~/tmp/scratch/xvfb-run.AEw8nQ’   ‘~/tmp/scratch/xvfb-run.BaGI1T’ ‘~/tmp/scratch/xvfb-run.CPSIKZ’   ‘~/tmp/scratch/xvfb-run.Iwyb9b’ ‘~/tmp/scratch/xvfb-run.KJoZRG’   ‘~/tmp/scratch/xvfb-run.ODIrw6’ ‘~/tmp/scratch/xvfb-run.P6pOkx’   ‘~/tmp/scratch/xvfb-run.Q9FVCb’ ‘~/tmp/scratch/xvfb-run.QFJfbN’   ‘~/tmp/scratch/xvfb-run.S3E4H2’ ‘~/tmp/scratch/xvfb-run.T2tr9w’   ‘~/tmp/scratch/xvfb-run.aUyRjJ’ ‘~/tmp/scratch/xvfb-run.aXGjsO’   ‘~/tmp/scratch/xvfb-run.aaM4Tm’ ‘~/tmp/scratch/xvfb-run.bt9JVt’   ‘~/tmp/scratch/xvfb-run.cwkK31’ ‘~/tmp/scratch/xvfb-run.dfnxHE’   ‘~/tmp/scratch/xvfb-run.fYfJOQ’ ‘~/tmp/scratch/xvfb-run.gK8wC0’   ‘~/tmp/scratch/xvfb-run.hYLNOR’ ‘~/tmp/scratch/xvfb-run.iR91KZ’   ‘~/tmp/scratch/xvfb-run.k4f91N’ ‘~/tmp/scratch/xvfb-run.l2gDYo’   ‘~/tmp/scratch/xvfb-run.nA2AJi’ ‘~/tmp/scratch/xvfb-run.pIkgkz’   ‘~/tmp/scratch/xvfb-run.pJsHOv’ ‘~/tmp/scratch/xvfb-run.qXHHLK’   ‘~/tmp/scratch/xvfb-run.secPN0’ ‘~/tmp/scratch/xvfb-run.tGdg1g’   ‘~/tmp/scratch/xvfb-run.uxVPFf’ ‘~/tmp/scratch/xvfb-run.w6sfG2’   ‘~/tmp/scratch/xvfb-run.x37FDp’
• DONE

Status: 1 NOTE