• using R Under development (unstable) (2023-05-27 r84465)
• using platform: x86_64-pc-linux-gnu
• R was compiled by
      gcc-12 (Debian 12.2.0-14) 12.2.0
      GNU Fortran (Debian 12.2.0-14) 12.2.0
• running under: Debian GNU/Linux 12 (bookworm)
• using session charset: UTF-8
• checking for file ‘CommKern/DESCRIPTION’ ... OK
• this is package ‘CommKern’ version ‘1.0.1’
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘CommKern’ can be installed ... OK
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [0s/0s] OK
• checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
• checking whether the package can be unloaded cleanly ... [0s/0s] OK
• checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
• checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
• checking loading without being on the library search path ... [0s/0s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [7s/12s] OK
• checking Rd files ... [1s/1s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [0s/1s] OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [12s/18s] OK
  Examples with CPU (user + system) or elapsed time > 5s
       user system elapsed
  hms 4.348 0.069 5.866
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [11s/23s] OK
    Running ‘test-NMI.R’ [0s/1s]
    Running ‘test-adj_RI.R’ [0s/1s]
    Running ‘test-community_allegiance.R’ [0s/1s]
    Running ‘test-compute_mod_matrix.R’ [0s/1s]
    Running ‘test-compute_multimodal_mod.R’ [0s/1s]
    Running ‘test-consensus_similarity.R’ [2s/4s]
    Running ‘test-count_pairs.R’ [0s/1s]
    Running ‘test-degree.R’ [0s/1s]
    Running ‘test-entropy.R’ [0s/1s]
    Running ‘test-ext_distance.R’ [1s/2s]
    Running ‘test-ham_distance.R’ [1s/1s]
    Running ‘test-hms.R’ [0s/1s]
    Running ‘test-kernel.R’ [0s/1s]
    Running ‘test-matrix_to_df.R’ [1s/1s]
    Running ‘test-purity.R’ [0s/1s]
    Running ‘test-score_cont_nonparam.R’ [0s/1s]
    Running ‘test-score_cont_semiparam.R’ [0s/1s]
    Running ‘test-score_log_nonparam.R’ [0s/1s]
    Running ‘test-score_log_semiparam.R’ [0s/1s]
    Running ‘test-sort_pairs.R’ [0s/0s]
    Running ‘test-subset_matrix_to_df.R’ [0s/1s]
    Running ‘test-trace.R’ [0s/1s]
    Running ‘test-up_low.R’ [0s/0s]
    Running ‘test-zrand.R’ [0s/1s]
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes in ‘inst/doc’ ... OK
• checking re-building of vignette outputs ... [48s/78s] OK
• checking PDF version of manual ... [5s/13s] OK
• checking HTML version of manual ... [1s/4s] OK
• checking for non-standard things in the check directory ... OK
• DONE

Status: OK