• using R Under development (unstable) (2026-07-30 r90327)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-16 (Debian 16.1.0-3) 16.1.0     GNU Fortran (Debian 16.1.0-3) 16.1.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-07-31 11:13:21 UTC
• checking for file ‘BayesMallows/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘BayesMallows’ version ‘2.2.7’
• package encoding: UTF-8
• checking CRAN incoming feasibility ... [1s/2s] OK
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘BayesMallows’ can be installed ... OK See the install log for details.
• used C++ compiler: ‘g++-16 (Debian 16.1.0-3) 16.1.0’
• checking C++ specification ... INFO   specified C++17
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [0s/1s] OK
• checking whether the package can be loaded with stated dependencies ... [0s/1s] OK
• checking whether the package can be unloaded cleanly ... [0s/1s] OK
• checking whether the namespace can be loaded with stated dependencies ... [0s/1s] OK
• checking whether the namespace can be unloaded cleanly ... [0s/1s] OK
• checking loading without being on the library search path ... [0s/1s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [8s/11s] OK
• checking Rd files ... [1s/1s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [0s/0s] OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking R/sysdata.rda ... OK
• checking line endings in C/C++/Fortran sources/headers ... OK
• checking line endings in Makefiles ... OK
• checking compilation flags in Makevars ... OK
• checking for GNU extensions in Makefiles ... OK
• checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
• checking use of PKG_*FLAGS in Makefiles ... OK
• checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
• checking pragmas in C/C++ headers and code ... OK
• checking compilation flags used ... OK
• checking compiled code ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [38s/50s] OK Examples with CPU (user + system) or elapsed time > 5s                           user system elapsed compute_mallows 5.115 0.100 7.350 predict_top_k 4.603 0.095 6.629 plot_elbow 4.500 0.005 5.616 compute_mallows_mixtures 4.226 0.095 5.453 plot_top_k 4.062 0.006 5.588
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [52s/67s] OK   Running ‘testthat.R’ [51s/66s]
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [5s/8s] OK
• checking PDF version of manual ... [6s/8s] OK
• checking HTML version of manual ... [2s/3s] OK
• checking for non-standard things in the check directory ... OK
• checking for new files in some other directories ... NOTE Found the following files/directories:   ‘~/tmp/scratch/Rtmp0XK2x0’ ‘~/tmp/scratch/Rtmp1Bwap5’   ‘~/tmp/scratch/Rtmp1UoBrU’ ‘~/tmp/scratch/Rtmp1tOYRo’   ‘~/tmp/scratch/Rtmp1wka5N’ ‘~/tmp/scratch/Rtmp2SXiYD’   ‘~/tmp/scratch/Rtmp2T9kOT’ ‘~/tmp/scratch/Rtmp3Ey5Yj’   ‘~/tmp/scratch/Rtmp4tIi8x’ ‘~/tmp/scratch/Rtmp4y1iSU’   ‘~/tmp/scratch/Rtmp5K4nyQ’ ‘~/tmp/scratch/Rtmp5dtdGK’   ‘~/tmp/scratch/Rtmp5mawZY’ ‘~/tmp/scratch/Rtmp6p51dq’   ‘~/tmp/scratch/Rtmp8GHkZt’ ‘~/tmp/scratch/Rtmp8KmfOr’   ‘~/tmp/scratch/Rtmp8jndLD’ ‘~/tmp/scratch/Rtmp9SKaYN’   ‘~/tmp/scratch/Rtmp9yhR3Q’ ‘~/tmp/scratch/RtmpASPTw7’   ‘~/tmp/scratch/RtmpAubO3N’ ‘~/tmp/scratch/RtmpBEPdw0’   ‘~/tmp/scratch/RtmpCB9bOP’ ‘~/tmp/scratch/RtmpD8KPbJ’   ‘~/tmp/scratch/RtmpDXtiSt’ ‘~/tmp/scratch/RtmpDipMn4’   ‘~/tmp/scratch/RtmpEkc9k4’ ‘~/tmp/scratch/RtmpFQO40K’   ‘~/tmp/scratch/RtmpFYaXZU’ ‘~/tmp/scratch/RtmpFi48R2’   ‘~/tmp/scratch/RtmpFlXpIM’ ‘~/tmp/scratch/RtmpFpjiNj’   ‘~/tmp/scratch/RtmpFqG0ST’ ‘~/tmp/scratch/RtmpGDiIHQ’   ‘~/tmp/scratch/RtmpGurQ2N’ ‘~/tmp/scratch/RtmpH0TAe2’   ‘~/tmp/scratch/RtmpHnG8uw’ ‘~/tmp/scratch/RtmpI7eXgd’   ‘~/tmp/scratch/RtmpIELoHN’ ‘~/tmp/scratch/RtmpIyMk6N’   ‘~/tmp/scratch/RtmpJ8QKi6’ ‘~/tmp/scratch/RtmpJUwz2F’   ‘~/tmp/scratch/RtmpJWm6EK’ ‘~/tmp/scratch/RtmpJysqtI’   ‘~/tmp/scratch/RtmpL1xuEJ’ ‘~/tmp/scratch/RtmpLhaedt’   ‘~/tmp/scratch/RtmpLu9UEz’ ‘~/tmp/scratch/RtmpM2RTXS’   ‘~/tmp/scratch/RtmpMXw41i’ ‘~/tmp/scratch/RtmpNNZVFj’   ‘~/tmp/scratch/RtmpNaIhTm’ ‘~/tmp/scratch/RtmpNleQcC’   ‘~/tmp/scratch/RtmpO2LFhC’ ‘~/tmp/scratch/RtmpOHYtPb’   ‘~/tmp/scratch/RtmpOgrpgy’ ‘~/tmp/scratch/RtmpOxcrJR’   ‘~/tmp/scratch/RtmpPgx5Vq’ ‘~/tmp/scratch/RtmpPjULnK’   ‘~/tmp/scratch/RtmpQYbMkE’ ‘~/tmp/scratch/RtmpQv6fgt’   ‘~/tmp/scratch/RtmpRGZdOM’ ‘~/tmp/scratch/RtmpS5zqxK’   ‘~/tmp/scratch/RtmpSDD3yj’ ‘~/tmp/scratch/RtmpSGRAxR’   ‘~/tmp/scratch/RtmpSStYHC’ ‘~/tmp/scratch/RtmpSqtBkc’   ‘~/tmp/scratch/RtmpStCp4g’ ‘~/tmp/scratch/RtmpTKjewb’   ‘~/tmp/scratch/RtmpTkxdUp’ ‘~/tmp/scratch/RtmpTpg3uC’   ‘~/tmp/scratch/RtmpTuVlNV’ ‘~/tmp/scratch/RtmpU3nYXB’   ‘~/tmp/scratch/RtmpUIKgLc’ ‘~/tmp/scratch/RtmpUPBbPh’   ‘~/tmp/scratch/RtmpUQGnO8’ ‘~/tmp/scratch/RtmpUYPmnS’   ‘~/tmp/scratch/RtmpUbn9Q1’ ‘~/tmp/scratch/RtmpUcA8yK’   ‘~/tmp/scratch/RtmpUjfZKe’ ‘~/tmp/scratch/RtmpVDpWob’   ‘~/tmp/scratch/RtmpVDrNjn’ ‘~/tmp/scratch/RtmpVm4T0G’   ‘~/tmp/scratch/RtmpVyifa6’ ‘~/tmp/scratch/RtmpW4QN8e’   ‘~/tmp/scratch/RtmpWAOjf2’ ‘~/tmp/scratch/RtmpWK3Jej’   ‘~/tmp/scratch/RtmpWO80Jh’ ‘~/tmp/scratch/RtmpWeshV8’   ‘~/tmp/scratch/RtmpWk31oo’ ‘~/tmp/scratch/RtmpWkGRN5’   ‘~/tmp/scratch/RtmpXBlZjC’ ‘~/tmp/scratch/RtmpXDdtBO’   ‘~/tmp/scratch/RtmpXirC5e’ ‘~/tmp/scratch/RtmpXlNj1n’   ‘~/tmp/scratch/RtmpZGw6HR’ ‘~/tmp/scratch/RtmpZjMXYo’   ‘~/tmp/scratch/RtmpaU8kPG’ ‘~/tmp/scratch/RtmpbDevc1’   ‘~/tmp/scratch/RtmpbNeDFe’ ‘~/tmp/scratch/RtmpbkabrT’   ‘~/tmp/scratch/Rtmpc83own’ ‘~/tmp/scratch/Rtmpd4DCQc’   ‘~/tmp/scratch/RtmpdI7vkr’ ‘~/tmp/scratch/RtmpdN9VjI’   ‘~/tmp/scratch/RtmpdYF3S1’ ‘~/tmp/scratch/RtmpeO2vvU’   ‘~/tmp/scratch/RtmpejNUSi’ ‘~/tmp/scratch/RtmpemfNKs’   ‘~/tmp/scratch/RtmpepZFwu’ ‘~/tmp/scratch/RtmperUH9B’   ‘~/tmp/scratch/Rtmpf5QRCJ’ ‘~/tmp/scratch/RtmpfWacwB’   ‘~/tmp/scratch/RtmpfsIXIX’ ‘~/tmp/scratch/RtmpgNrbgZ’   ‘~/tmp/scratch/RtmpgU0Hie’ ‘~/tmp/scratch/RtmpiJlLe8’   ‘~/tmp/scratch/RtmpimsOE4’ ‘~/tmp/scratch/RtmpitfLgx’   ‘~/tmp/scratch/RtmpjIU3w2’ ‘~/tmp/scratch/RtmpjOXMX3’   ‘~/tmp/scratch/RtmpjpxqDc’ ‘~/tmp/scratch/Rtmpjqj8PC’   ‘~/tmp/scratch/RtmpjrdTz4’ ‘~/tmp/scratch/Rtmpk1vM26’   ‘~/tmp/scratch/Rtmpk49JCq’ ‘~/tmp/scratch/RtmpkL71yt’   ‘~/tmp/scratch/Rtmplqk7H9’ ‘~/tmp/scratch/RtmpmTJaQm’   ‘~/tmp/scratch/RtmpnOIby8’ ‘~/tmp/scratch/RtmpnSj3jh’   ‘~/tmp/scratch/Rtmpnn8fim’ ‘~/tmp/scratch/RtmpnrrkVN’   ‘~/tmp/scratch/RtmpnyrNy3’ ‘~/tmp/scratch/RtmpoHV97w’   ‘~/tmp/scratch/Rtmpon7vdE’ ‘~/tmp/scratch/RtmppA2FWz’   ‘~/tmp/scratch/RtmppFFmlq’ ‘~/tmp/scratch/RtmppsZKBJ’   ‘~/tmp/scratch/RtmpqoKpB5’ ‘~/tmp/scratch/RtmpsGMnew’   ‘~/tmp/scratch/RtmpsOvLTn’ ‘~/tmp/scratch/RtmpsjgTHn’   ‘~/tmp/scratch/RtmptWv5np’ ‘~/tmp/scratch/Rtmptb3XAK’   ‘~/tmp/scratch/Rtmpu3jdbx’ ‘~/tmp/scratch/RtmpuxlYgB’   ‘~/tmp/scratch/Rtmpv9UtUK’ ‘~/tmp/scratch/RtmpvDxXdD’   ‘~/tmp/scratch/RtmpvW8IFi’ ‘~/tmp/scratch/Rtmpwt4gF4’   ‘~/tmp/scratch/RtmpxAUVQW’ ‘~/tmp/scratch/Rtmpxj5sFQ’   ‘~/tmp/scratch/RtmpxqfjWV’ ‘~/tmp/scratch/Rtmpy29i7u’   ‘~/tmp/scratch/Rtmpy5taFJ’ ‘~/tmp/scratch/RtmpyJQVkP’   ‘~/tmp/scratch/RtmpyTDyLo’ ‘~/tmp/scratch/Rtmpz1N3uY’   ‘~/tmp/scratch/Rtmpz5VVXc’ ‘~/tmp/scratch/RtmpzTamgS’   ‘~/tmp/scratch/RtmpzfyBPa’ ‘~/tmp/scratch/cc3sVDf5.s’   ‘~/tmp/scratch/ccFDph4f.s’ ‘~/tmp/scratch/xvfb-run.2ZN2JK’   ‘~/tmp/scratch/xvfb-run.3Jr5r7’ ‘~/tmp/scratch/xvfb-run.3fbfI1’   ‘~/tmp/scratch/xvfb-run.41cgHi’ ‘~/tmp/scratch/xvfb-run.5s63x2’   ‘~/tmp/scratch/xvfb-run.67f1x5’ ‘~/tmp/scratch/xvfb-run.6brziq’   ‘~/tmp/scratch/xvfb-run.74EZhI’ ‘~/tmp/scratch/xvfb-run.7E4vZW’   ‘~/tmp/scratch/xvfb-run.945Lll’ ‘~/tmp/scratch/xvfb-run.BEuxV5’   ‘~/tmp/scratch/xvfb-run.CCtQ47’ ‘~/tmp/scratch/xvfb-run.DCx3HT’   ‘~/tmp/scratch/xvfb-run.DS4CLQ’ ‘~/tmp/scratch/xvfb-run.EUJ6vg’   ‘~/tmp/scratch/xvfb-run.EeOU1p’ ‘~/tmp/scratch/xvfb-run.G30MeC’   ‘~/tmp/scratch/xvfb-run.GQ8xTD’ ‘~/tmp/scratch/xvfb-run.GRbIzl’   ‘~/tmp/scratch/xvfb-run.GWRD3l’ ‘~/tmp/scratch/xvfb-run.HhUDC8’   ‘~/tmp/scratch/xvfb-run.I56vR5’ ‘~/tmp/scratch/xvfb-run.IE2chZ’   ‘~/tmp/scratch/xvfb-run.JCQCLw’ ‘~/tmp/scratch/xvfb-run.LKhMhF’   ‘~/tmp/scratch/xvfb-run.M91JAb’ ‘~/tmp/scratch/xvfb-run.NlH5g5’   ‘~/tmp/scratch/xvfb-run.NubatZ’ ‘~/tmp/scratch/xvfb-run.O2L13h’   ‘~/tmp/scratch/xvfb-run.ORFLEF’ ‘~/tmp/scratch/xvfb-run.Qk1EuM’   ‘~/tmp/scratch/xvfb-run.RLBPa4’ ‘~/tmp/scratch/xvfb-run.RtaldY’   ‘~/tmp/scratch/xvfb-run.RxNQKL’ ‘~/tmp/scratch/xvfb-run.TPgrwd’   ‘~/tmp/scratch/xvfb-run.U14FCg’ ‘~/tmp/scratch/xvfb-run.UmEN0k’   ‘~/tmp/scratch/xvfb-run.V4QBFc’ ‘~/tmp/scratch/xvfb-run.VZNzXn’   ‘~/tmp/scratch/xvfb-run.VdDDdU’ ‘~/tmp/scratch/xvfb-run.WO2fl0’   ‘~/tmp/scratch/xvfb-run.eLPLsY’ ‘~/tmp/scratch/xvfb-run.fxckoY’   ‘~/tmp/scratch/xvfb-run.g44bGd’ ‘~/tmp/scratch/xvfb-run.gEDNm2’   ‘~/tmp/scratch/xvfb-run.hrMsxV’ ‘~/tmp/scratch/xvfb-run.hu1HVY’   ‘~/tmp/scratch/xvfb-run.iHAcys’ ‘~/tmp/scratch/xvfb-run.ivwbDj’   ‘~/tmp/scratch/xvfb-run.jVd1xn’ ‘~/tmp/scratch/xvfb-run.k6NnDs’   ‘~/tmp/scratch/xvfb-run.kRkE25’ ‘~/tmp/scratch/xvfb-run.l2RBmW’   ‘~/tmp/scratch/xvfb-run.mcwcT8’ ‘~/tmp/scratch/xvfb-run.mxN53u’   ‘~/tmp/scratch/xvfb-run.nl3gxz’ ‘~/tmp/scratch/xvfb-run.qWyfBB’   ‘~/tmp/scratch/xvfb-run.rLmjQl’ ‘~/tmp/scratch/xvfb-run.ski2LL’   ‘~/tmp/scratch/xvfb-run.t11Z3g’ ‘~/tmp/scratch/xvfb-run.tCAdbl’   ‘~/tmp/scratch/xvfb-run.takQ3k’ ‘~/tmp/scratch/xvfb-run.uzuDHS’   ‘~/tmp/scratch/xvfb-run.x7ks6I’ ‘~/tmp/scratch/xvfb-run.yXg7gr’   ‘~/tmp/scratch/xvfb-run.ypvJQI’ ‘~/tmp/scratch/xvfb-run.yrj1q9’   ‘~/tmp/scratch/xvfb-run.z9W9JR’ ‘~/tmp/scratch/xvfb-run.zjsuCJ’   ‘~/tmp/scratch/xvfb-run.zp0vOi’
• DONE

Status: 1 NOTE