• using R Under development (unstable) (2026-07-30 r90327)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-16 (Debian 16.1.0-3) 16.1.0     GNU Fortran (Debian 16.1.0-3) 16.1.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-07-31 11:07:42 UTC
• checking for file ‘AmpliconDuo/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘AmpliconDuo’ version ‘1.1.1’
• checking CRAN incoming feasibility ... [1s/1s] OK
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking serialization versions ... OK
• checking whether package ‘AmpliconDuo’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [1s/2s] OK
• checking whether the package can be loaded with stated dependencies ... [1s/2s] OK
• checking whether the package can be unloaded cleanly ... [1s/2s] OK
• checking whether the namespace can be loaded with stated dependencies ... [1s/1s] OK
• checking whether the namespace can be unloaded cleanly ... [1s/2s] OK
• checking loading without being on the library search path ... [1s/1s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [7s/9s] OK
• checking Rd files ... [0s/0s] NOTE checkRd: (-1) AmpliconDuo-package.Rd:37-39: Lost braces in \itemize; meant \describe ? checkRd: (-1) AmpliconDuo-package.Rd:40-42: Lost braces in \itemize; meant \describe ? checkRd: (-1) AmpliconDuo-package.Rd:43-46: Lost braces in \itemize; meant \describe ? checkRd: (-1) AmpliconDuo-package.Rd:47-49: Lost braces in \itemize; meant \describe ? checkRd: (-1) AmpliconDuo-package.Rd:50-52: Lost braces in \itemize; meant \describe ? checkRd: (-1) AmpliconDuo-package.Rd:53-55: Lost braces in \itemize; meant \describe ? checkRd: (-1) AmpliconDuo-package.Rd:56-58: Lost braces in \itemize; meant \describe ?
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [0s/0s] OK
• checking data for ASCII and uncompressed saves ... OK
• checking examples ... [22s/25s] OK
• checking PDF version of manual ... [4s/5s] OK
• checking HTML version of manual ... [1s/1s] OK
• checking for non-standard things in the check directory ... OK
• checking for new files in some other directories ... NOTE Found the following files/directories:   ‘~/tmp/scratch/Rtmp0mYbc3’ ‘~/tmp/scratch/Rtmp0rpwFc’   ‘~/tmp/scratch/Rtmp13CsOr’ ‘~/tmp/scratch/Rtmp1XrN6r’   ‘~/tmp/scratch/Rtmp1sprfc’ ‘~/tmp/scratch/Rtmp34kdR1’   ‘~/tmp/scratch/Rtmp3DObt4’ ‘~/tmp/scratch/Rtmp48aBtt’   ‘~/tmp/scratch/Rtmp4Xdgu3’ ‘~/tmp/scratch/Rtmp4af4Wd’   ‘~/tmp/scratch/Rtmp4mLixi’ ‘~/tmp/scratch/Rtmp5SIssj’   ‘~/tmp/scratch/Rtmp5TagVv’ ‘~/tmp/scratch/Rtmp6SUSHr’   ‘~/tmp/scratch/Rtmp6ohOhJ’ ‘~/tmp/scratch/Rtmp7V05gn’   ‘~/tmp/scratch/Rtmp8bN1yx’ ‘~/tmp/scratch/Rtmp8rXm1R’   ‘~/tmp/scratch/RtmpB62uHV’ ‘~/tmp/scratch/RtmpC2hs5O’   ‘~/tmp/scratch/RtmpCB998K’ ‘~/tmp/scratch/RtmpCNkQEl’   ‘~/tmp/scratch/RtmpCPyTnr’ ‘~/tmp/scratch/RtmpDe9SST’   ‘~/tmp/scratch/RtmpE9ief6’ ‘~/tmp/scratch/RtmpFmJvKG’   ‘~/tmp/scratch/RtmpFzMAGJ’ ‘~/tmp/scratch/RtmpG60hHZ’   ‘~/tmp/scratch/RtmpHRzAnP’ ‘~/tmp/scratch/RtmpIdwSN9’   ‘~/tmp/scratch/RtmpJ8iZaM’ ‘~/tmp/scratch/RtmpLcC4dU’   ‘~/tmp/scratch/RtmpMOU1LX’ ‘~/tmp/scratch/RtmpMTikgJ’   ‘~/tmp/scratch/RtmpMmcC4z’ ‘~/tmp/scratch/RtmpMytcLH’   ‘~/tmp/scratch/RtmpNZt9Sp’ ‘~/tmp/scratch/RtmpNxaQOT’   ‘~/tmp/scratch/RtmpO4ipnI’ ‘~/tmp/scratch/RtmpO6YF8J’   ‘~/tmp/scratch/RtmpOieF1j’ ‘~/tmp/scratch/RtmpPa7cNF’   ‘~/tmp/scratch/RtmpPf0yE2’ ‘~/tmp/scratch/RtmpQ3sGkN’   ‘~/tmp/scratch/RtmpQA6PIn’ ‘~/tmp/scratch/RtmpQJCX34’   ‘~/tmp/scratch/RtmpQOiAJQ’ ‘~/tmp/scratch/RtmpR4P5Vu’   ‘~/tmp/scratch/RtmpRkXYK3’ ‘~/tmp/scratch/RtmpSnXkVK’   ‘~/tmp/scratch/RtmpTeaUqm’ ‘~/tmp/scratch/RtmpU2WSaZ’   ‘~/tmp/scratch/RtmpUjRLWU’ ‘~/tmp/scratch/RtmpV7gENi’   ‘~/tmp/scratch/RtmpVlCFuf’ ‘~/tmp/scratch/RtmpW0Up25’   ‘~/tmp/scratch/RtmpWTzgcV’ ‘~/tmp/scratch/RtmpWfGl1Y’   ‘~/tmp/scratch/RtmpXODrhO’ ‘~/tmp/scratch/RtmpXtzGGt’   ‘~/tmp/scratch/RtmpYEs3t6’ ‘~/tmp/scratch/RtmpYItair’   ‘~/tmp/scratch/RtmpYlbVyF’ ‘~/tmp/scratch/RtmpYubw6R’   ‘~/tmp/scratch/RtmpYy3bLL’ ‘~/tmp/scratch/RtmpZ423cJ’   ‘~/tmp/scratch/RtmpZ5O6dF’ ‘~/tmp/scratch/RtmpZA4vA5’   ‘~/tmp/scratch/RtmpZqoZtv’ ‘~/tmp/scratch/RtmpaVtYCz’   ‘~/tmp/scratch/RtmpbbW4Ps’ ‘~/tmp/scratch/RtmpdDrLuA’   ‘~/tmp/scratch/RtmpdWyVL4’ ‘~/tmp/scratch/RtmpdiobH4’   ‘~/tmp/scratch/Rtmpdo84rz’ ‘~/tmp/scratch/RtmpdplokF’   ‘~/tmp/scratch/RtmpeHZwyE’ ‘~/tmp/scratch/Rtmpehc3RJ’   ‘~/tmp/scratch/RtmpfBhtP6’ ‘~/tmp/scratch/RtmpfWlZLx’   ‘~/tmp/scratch/RtmpfbPPwk’ ‘~/tmp/scratch/RtmpfuGGDf’   ‘~/tmp/scratch/RtmpgKyJD5’ ‘~/tmp/scratch/RtmpgWbPxc’   ‘~/tmp/scratch/RtmphBGjfM’ ‘~/tmp/scratch/RtmphLdz8l’   ‘~/tmp/scratch/RtmphoEjYl’ ‘~/tmp/scratch/RtmpiNmtpL’   ‘~/tmp/scratch/RtmpiuFppO’ ‘~/tmp/scratch/Rtmpiy2IFq’   ‘~/tmp/scratch/RtmpjMuBQb’ ‘~/tmp/scratch/RtmpkHgp9q’   ‘~/tmp/scratch/Rtmpktdkwd’ ‘~/tmp/scratch/RtmpllyQ4B’   ‘~/tmp/scratch/Rtmpm2d8YI’ ‘~/tmp/scratch/RtmpmRBcLj’   ‘~/tmp/scratch/RtmpmVSN0G’ ‘~/tmp/scratch/RtmpmdFVZ8’   ‘~/tmp/scratch/Rtmpmq4g1k’ ‘~/tmp/scratch/Rtmpo8NVll’   ‘~/tmp/scratch/Rtmpo9NwAH’ ‘~/tmp/scratch/Rtmpof4yRg’   ‘~/tmp/scratch/RtmpofFofH’ ‘~/tmp/scratch/RtmpqywjGk’   ‘~/tmp/scratch/Rtmpr5utS4’ ‘~/tmp/scratch/RtmprZzfXV’   ‘~/tmp/scratch/RtmprboHdb’ ‘~/tmp/scratch/RtmpreOgyC’   ‘~/tmp/scratch/Rtmps8WMp7’ ‘~/tmp/scratch/RtmpsCzBj0’   ‘~/tmp/scratch/RtmpsTYh9N’ ‘~/tmp/scratch/Rtmpt9PS1k’   ‘~/tmp/scratch/RtmptX3Z3V’ ‘~/tmp/scratch/RtmpuTLyWY’   ‘~/tmp/scratch/RtmpuXcLmb’ ‘~/tmp/scratch/RtmpvVCK36’   ‘~/tmp/scratch/Rtmpve1bdk’ ‘~/tmp/scratch/RtmpvfqaNq’   ‘~/tmp/scratch/Rtmpw8zj6y’ ‘~/tmp/scratch/RtmpwnfHds’   ‘~/tmp/scratch/RtmpxCnDVO’ ‘~/tmp/scratch/RtmpyXN8xw’   ‘~/tmp/scratch/Rtmpyp3qu6’ ‘~/tmp/scratch/RtmpypXQxC’   ‘~/tmp/scratch/Rtmpyw8lv4’ ‘~/tmp/scratch/RtmpzLVNlO’   ‘~/tmp/scratch/xvfb-run.0t80Ia’ ‘~/tmp/scratch/xvfb-run.2FNI3r’   ‘~/tmp/scratch/xvfb-run.2bH3bX’ ‘~/tmp/scratch/xvfb-run.2e3GU9’   ‘~/tmp/scratch/xvfb-run.2wLdQE’ ‘~/tmp/scratch/xvfb-run.3I9NHb’   ‘~/tmp/scratch/xvfb-run.4kLQnM’ ‘~/tmp/scratch/xvfb-run.6On3ow’   ‘~/tmp/scratch/xvfb-run.7qUyYc’ ‘~/tmp/scratch/xvfb-run.8MAwrM’   ‘~/tmp/scratch/xvfb-run.9RLkZM’ ‘~/tmp/scratch/xvfb-run.9tLly6’   ‘~/tmp/scratch/xvfb-run.B9I41O’ ‘~/tmp/scratch/xvfb-run.BJZ43a’   ‘~/tmp/scratch/xvfb-run.CaZypf’ ‘~/tmp/scratch/xvfb-run.DdQV3c’   ‘~/tmp/scratch/xvfb-run.DpAPK7’ ‘~/tmp/scratch/xvfb-run.FPKoQ4’   ‘~/tmp/scratch/xvfb-run.Fk1BUw’ ‘~/tmp/scratch/xvfb-run.G0Efu7’   ‘~/tmp/scratch/xvfb-run.GGjo2E’ ‘~/tmp/scratch/xvfb-run.HTDsX8’   ‘~/tmp/scratch/xvfb-run.I9o2F4’ ‘~/tmp/scratch/xvfb-run.I9zCAK’   ‘~/tmp/scratch/xvfb-run.Ibq2sp’ ‘~/tmp/scratch/xvfb-run.Immcxp’   ‘~/tmp/scratch/xvfb-run.LCPURR’ ‘~/tmp/scratch/xvfb-run.LNqdGw’   ‘~/tmp/scratch/xvfb-run.Mg4Eqd’ ‘~/tmp/scratch/xvfb-run.NNBQjM’   ‘~/tmp/scratch/xvfb-run.NuOo2M’ ‘~/tmp/scratch/xvfb-run.Owc1Jf’   ‘~/tmp/scratch/xvfb-run.PSVnxP’ ‘~/tmp/scratch/xvfb-run.PgBOCi’   ‘~/tmp/scratch/xvfb-run.PkUa5B’ ‘~/tmp/scratch/xvfb-run.PtT5DH’   ‘~/tmp/scratch/xvfb-run.Pv91Bl’ ‘~/tmp/scratch/xvfb-run.RkJ2Pz’   ‘~/tmp/scratch/xvfb-run.SNM4Pm’ ‘~/tmp/scratch/xvfb-run.SXIAyp’   ‘~/tmp/scratch/xvfb-run.W7dEfU’ ‘~/tmp/scratch/xvfb-run.Xlrws4’   ‘~/tmp/scratch/xvfb-run.Y2dF2D’ ‘~/tmp/scratch/xvfb-run.ZghExH’   ‘~/tmp/scratch/xvfb-run.ZmxC3k’ ‘~/tmp/scratch/xvfb-run.aTdf7E’   ‘~/tmp/scratch/xvfb-run.bIEL8u’ ‘~/tmp/scratch/xvfb-run.fospFh’   ‘~/tmp/scratch/xvfb-run.givJXN’ ‘~/tmp/scratch/xvfb-run.hQP2Te’   ‘~/tmp/scratch/xvfb-run.piaEo6’ ‘~/tmp/scratch/xvfb-run.uchHGo’   ‘~/tmp/scratch/xvfb-run.y6NbRU’
• DONE

Status: 2 NOTEs