* installing to library ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages’ * installing *source* package ‘vectra’ ... ** this is package ‘vectra’ version ‘0.12.0’ ** package ‘vectra’ successfully unpacked and MD5 sums checked ** using staged installation configure: using pre-vendored src/tdc/ ** libs using C compiler: ‘Debian clang version 23.1.1 (2)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpKreJZe/R.INSTALL3a01f670f53b86/vectra/src' clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c agg_ops.c -o agg_ops.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c agg_spill.c -o agg_spill.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c array.c -o array.o array.c:181:13: warning: unused variable 'src_bytes' [-Wunused-variable] 181 | int64_t src_bytes = (src_off + n + 7) >> 3; | ^~~~~~~~~ 1 warning generated. clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c batch.c -o batch.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c bed_scan.c -o bed_scan.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c block.c -o block.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c builder.c -o builder.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c byte_reader.c -o byte_reader.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c coerce.c -o coerce.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c collect.c -o collect.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c concat.c -o concat.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c csv_scan.c -o csv_scan.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c csv_write.c -o csv_write.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c dropcol.c -o dropcol.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c edt.c -o edt.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c error.c -o error.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c expr.c -o expr.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c expr_datetime.c -o expr_datetime.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c expr_geom.c -o expr_geom.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c expr_seq.c -o expr_seq.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c expr_string.c -o expr_string.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c expr_vec.c -o expr_vec.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c fasta_scan.c -o fasta_scan.o fasta_scan.c:46:20: warning: unused function 'gbuf_str' [-Wunused-function] 46 | static const char *gbuf_str(GBuf *g) { | ^~~~~~~~ 1 warning generated. clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c feature_knn.c -o feature_knn.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c file_map.c -o file_map.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c filter.c -o filter.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c focal.c -o focal.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c fuzzy_join.c -o fuzzy_join.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c group_agg.c -o group_agg.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c group_topn.c -o group_topn.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c hash.c -o hash.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c interval_join.c -o interval_join.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c join.c -o join.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c join_partition.c -o join_partition.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c key_arena.c -o key_arena.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c key_snap.c -o key_snap.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c kmer.c -o kmer.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c libgeos.c -o libgeos.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c limit.c -o limit.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c network.c -o network.o network.c:246:30: warning: '/*' within block comment [-Wcomment] 246 | /* pop the minimum into *outk/*outn; returns 0 when empty */ | ^ 1 warning generated. clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c node_rows.c -o node_rows.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c optimize.c -o optimize.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c project.c -o project.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c r_bridge.c -o r_bridge.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c r_bridge_core.c -o r_bridge_core.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c r_bridge_index.c -o r_bridge_index.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c r_bridge_io.c -o r_bridge_io.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c r_bridge_nodes.c -o r_bridge_nodes.o r_bridge_nodes.c:477:14: warning: variable 'method' is used uninitialized whenever 'if' condition is false [-Wsometimes-uninitialized] 477 | else if (method_int == 2) method = FUZZY_JW; | ^~~~~~~~~~~~~~~ r_bridge_nodes.c:489:9: note: uninitialized use occurs here 489 | method, max_dist, n_threads, | ^~~~~~ r_bridge_nodes.c:477:10: note: remove the 'if' if its condition is always true 477 | else if (method_int == 2) method = FUZZY_JW; | ^~~~~~~~~~~~~~~~~~~~ ~ 478 | else vectra_error("fuzzy_join: unknown method: %d", method_int); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ r_bridge_nodes.c:474:5: note: variable 'method' is declared here 474 | FuzzyMethod method; | ^ r_bridge_nodes.c:550:14: warning: variable 'kind' is used uninitialized whenever 'if' condition is false [-Wsometimes-uninitialized] 550 | else if (strcmp(kind_str, "left") == 0) kind = IJOIN_LEFT; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ r_bridge_nodes.c:562:9: note: uninitialized use occurs here 562 | kind, closed, n_threads, suffix_y, | ^~~~ r_bridge_nodes.c:550:10: note: remove the 'if' if its condition is always true 550 | else if (strcmp(kind_str, "left") == 0) kind = IJOIN_LEFT; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~ 551 | else vectra_error("interval_join: unknown kind: %s", kind_str); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ r_bridge_nodes.c:548:5: note: variable 'kind' is declared here 548 | IntervalJoinKind kind; | ^ 2 warnings generated. clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c r_bridge_raster.c -o r_bridge_raster.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c rasterize.c -o rasterize.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c rec_spill.c -o rec_spill.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c rowid.c -o rowid.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c scalar_ops.c -o scalar_ops.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c scan.c -o scan.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c schema.c -o schema.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c sort.c -o sort.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c sql_scan.c -o sql_scan.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c sql_write.c -o sql_write.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c sqlite_format.c -o sqlite_format.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tiff_format.c -o tiff_format.o tiff_format.c:2064:19: warning: unused function 'tiff_entry_size' [-Wunused-function] 2064 | static inline int tiff_entry_size(const TiffWriter *w) { | ^~~~~~~~~~~~~~~ 1 warning generated. clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tiff_scan.c -o tiff_scan.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tiff_write.c -o tiff_write.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c topn.c -o topn.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c vec_raster.c -o vec_raster.o vec_raster.c:2429:25: warning: unused variable 'n_pix' [-Wunused-variable] 2429 | int64_t n_pix = tw * th; | ^~~~~ vec_raster.c:315:13: warning: unused function 'vecr_codec_for' [-Wunused-function] 315 | static void vecr_codec_for(VecrCodec *c, uint8_t dt) { | ^~~~~~~~~~~~~~ 2 warnings generated. clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c vtr1_tdc.c -o vtr1_tdc.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c vtr_append.c -o vtr_append.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c vtr_append_cols.c -o vtr_append_cols.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c vtr_codec_tdc.c -o vtr_codec_tdc.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c vtr_delete.c -o vtr_delete.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c vtr_diff.c -o vtr_diff.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c vtr_fileops.c -o vtr_fileops.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c vtr_geos.c -o vtr_geos.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c vtr_overlay.c -o vtr_overlay.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c vtr_spatial.c -o vtr_spatial.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c vtr_write.c -o vtr_write.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c vtri.c -o vtri.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c warp.c -o warp.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c window.c -o window.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/api/decode.c -o tdc/src/api/decode.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/api/decode_dict.c -o tdc/src/api/decode_dict.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/api/decode_ex.c -o tdc/src/api/decode_ex.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/api/decode_impl.c -o tdc/src/api/decode_impl.o tdc/src/api/decode_impl.c:344:16: warning: unused variable 'raw_mib' [-Wunused-variable] 344 | double raw_mib = (double)raw / (1024.0 * 1024.0); | ^~~~~~~ tdc/src/api/decode_impl.c:345:21: warning: unused variable 'tag' [-Wunused-variable] 345 | const char *tag = timer_tag ? timer_tag : "dec "; | ^~~ tdc/src/api/decode_impl.c:210:12: warning: variable 't_entropy' set but not used [-Wunused-but-set-variable] 210 | double t_entropy = 0.0, t_xform = 0.0, t_model = 0.0; | ^ tdc/src/api/decode_impl.c:210:29: warning: variable 't_xform' set but not used [-Wunused-but-set-variable] 210 | double t_entropy = 0.0, t_xform = 0.0, t_model = 0.0; | ^ tdc/src/api/decode_impl.c:210:44: warning: variable 't_model' set but not used [-Wunused-but-set-variable] 210 | double t_entropy = 0.0, t_xform = 0.0, t_model = 0.0; | ^ 5 warnings generated. clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/api/decode_into.c -o tdc/src/api/decode_into.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/api/decode_varlen.c -o tdc/src/api/decode_varlen.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/api/encode.c -o tdc/src/api/encode.o tdc/src/api/encode.c:289:17: warning: unused variable 'raw_mib' [-Wunused-variable] 289 | double raw_mib = (double)raw / (1024.0 * 1024.0); | ^~~~~~~ tdc/src/api/encode.c:126:12: warning: variable 't_model' set but not used [-Wunused-but-set-variable] 126 | double t_model = 0.0, t_xform = 0.0, t_entropy = 0.0; | ^ tdc/src/api/encode.c:126:27: warning: variable 't_xform' set but not used [-Wunused-but-set-variable] 126 | double t_model = 0.0, t_xform = 0.0, t_entropy = 0.0; | ^ tdc/src/api/encode.c:126:42: warning: variable 't_entropy' set but not used [-Wunused-but-set-variable] 126 | double t_model = 0.0, t_xform = 0.0, t_entropy = 0.0; | ^ 4 warnings generated. clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/api/pushpull_decode.c -o tdc/src/api/pushpull_decode.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/api/pushpull_encode.c -o tdc/src/api/pushpull_encode.o tdc/src/api/pushpull_encode.c:66:14: warning: unused function 'pp_alloc' [-Wunused-function] 66 | static void *pp_alloc(tdc_pushpull_encoder *e, void *p, size_t sz) { | ^~~~~~~~ 1 warning generated. clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/api/stream_decode.c -o tdc/src/api/stream_decode.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/api/stream_encode.c -o tdc/src/api/stream_encode.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/core/arena.c -o tdc/src/core/arena.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/core/block.c -o tdc/src/core/block.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/core/decode_profile.c -o tdc/src/core/decode_profile.o tdc/src/core/decode_profile.c:53:16: warning: unused variable 'pct' [-Wunused-variable] 53 | double pct = 100.0 * (double)tdc_dp_cycles[i] / (double)total; | ^~~ tdc/src/core/decode_profile.c:54:16: warning: unused variable 'cps' [-Wunused-variable] 54 | double cps = tdc_dp_n_seqs_total | ^~~ tdc/src/core/decode_profile.c:72:20: warning: unused variable 'pct' [-Wunused-variable] 72 | double pct = 100.0 * (double)tdc_dp_off_hist[i] / (double)hsum; | ^~~ tdc/src/core/decode_profile.c:65:28: warning: unused variable 'labels' [-Wunused-variable] 65 | static const char *labels[8] = { | ^~~~~~ tdc/src/core/decode_profile.c:44:24: warning: unused variable 'names' [-Wunused-variable] 44 | static const char *names[TDC_DP_NSEC] = { | ^~~~~ 5 warnings generated. clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/core/error.c -o tdc/src/core/error.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/core/registry.c -o tdc/src/core/registry.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/core/stream.c -o tdc/src/core/stream.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/core/version.c -o tdc/src/core/version.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/entropy/deflate.c -o tdc/src/entropy/deflate.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/entropy/fse.c -o tdc/src/entropy/fse.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/entropy/huffman.c -o tdc/src/entropy/huffman.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/entropy/huffman4.c -o tdc/src/entropy/huffman4.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/entropy/lane.c -o tdc/src/entropy/lane.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/entropy/lz.c -o tdc/src/entropy/lz.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/entropy/lz_opt.c -o tdc/src/entropy/lz_opt.o tdc/src/entropy/lz_opt.c:915:16: warning: unused variable 't_end' [-Wunused-variable] 915 | double t_end = tdc_now_secs(); | ^~~~~ tdc/src/entropy/lz_opt.c:917:18: warning: unused variable 'cnt_work' [-Wunused-variable] 917 | uint64_t cnt_work = cnt_total - cnt_skip - cnt_inf; | ^~~~~~~~ tdc/src/entropy/lz_opt.c:670:18: warning: unused variable 't_start' [-Wunused-variable] 670 | const double t_start = timing ? tdc_now_secs() : 0.0; | ^~~~~~~ tdc/src/entropy/lz_opt.c:700:18: warning: unused variable 't_init' [-Wunused-variable] 700 | const double t_init = timing ? tdc_now_secs() : 0.0; | ^~~~~~ tdc/src/entropy/lz_opt.c:703:41: warning: variable 'cnt_rep_skip' set but not used [-Wunused-but-set-variable] 703 | uint64_t cnt_skip = 0, cnt_inf = 0, cnt_rep_skip = 0; | ^ tdc/src/entropy/lz_opt.c:704:14: warning: variable 'cnt_chain' set but not used [-Wunused-but-set-variable] 704 | uint64_t cnt_chain = 0, cnt_chain_skip = 0; | ^ tdc/src/entropy/lz_opt.c:704:29: warning: variable 'cnt_chain_skip' set but not used [-Wunused-but-set-variable] 704 | uint64_t cnt_chain = 0, cnt_chain_skip = 0; | ^ tdc/src/entropy/lz_opt.c:705:14: warning: variable 'rep_bytes' set but not used [-Wunused-but-set-variable] 705 | uint64_t rep_bytes = 0, rep_calls = 0; | ^ tdc/src/entropy/lz_opt.c:705:29: warning: variable 'rep_calls' set but not used [-Wunused-but-set-variable] 705 | uint64_t rep_bytes = 0, rep_calls = 0; | ^ tdc/src/entropy/lz_opt.c:864:18: warning: unused variable 't_loop' [-Wunused-variable] 864 | const double t_loop = timing ? tdc_now_secs() : 0.0; | ^~~~~~ 10 warnings generated. clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/entropy/lz_streams.c -o tdc/src/entropy/lz_streams.o tdc/src/entropy/lz_streams.c:1233:22: warning: variable 'p_extra' set but not used [-Wunused-but-set-variable] 1233 | uint32_t p_extra = 0; | ^ tdc/src/entropy/lz_streams.c:1346:18: warning: variable 'll_extra_bits' set but not used [-Wunused-but-set-variable] 1346 | uint32_t ll_extra_bits = 0, ml_extra_bits = 0, off_extra_bits = 0; | ^ tdc/src/entropy/lz_streams.c:1346:37: warning: variable 'ml_extra_bits' set but not used [-Wunused-but-set-variable] 1346 | uint32_t ll_extra_bits = 0, ml_extra_bits = 0, off_extra_bits = 0; | ^ tdc/src/entropy/lz_streams.c:1347:18: warning: variable 'n_repcodes' set but not used [-Wunused-but-set-variable] 1347 | uint32_t n_repcodes = 0; | ^ tdc/src/entropy/lz_streams.c:1565:16: warning: unused variable 't_other' [-Wunused-variable] 1565 | double t_other = t_entropy - t_lit_ctx; | ^~~~~~~ tdc/src/entropy/lz_streams.c:1566:16: warning: unused variable 't_total' [-Wunused-variable] 1566 | double t_total = t_initial + t_priced + t_build + t_entropy; | ^~~~~~~ tdc/src/entropy/lz_streams.c:1582:18: warning: unused variable 'total_enc' [-Wunused-variable] 1582 | uint32_t total_enc = (uint32_t)LZS_HEADER_SIZE_V2 | ^~~~~~~~~ tdc/src/entropy/lz_streams.c:1584:21: warning: unused variable 'lit_mode' [-Wunused-variable] 1584 | const char *lit_mode = use_lit_ctx ? "CTX" : id_name[id_lit]; | ^~~~~~~~ tdc/src/entropy/lz_streams.c:365:24: warning: unused function 'lzs_bits_read' [-Wunused-function] 365 | static inline uint32_t lzs_bits_read(const uint8_t *buf, uint32_t *bit_pos, | ^~~~~~~~~~~~~ tdc/src/entropy/lz_streams.c:533:13: warning: unused function 'lzs_shuffle_u32' [-Wunused-function] 533 | static void lzs_shuffle_u32(const uint32_t *src, uint32_t n, uint8_t *dst) { | ^~~~~~~~~~~~~~~ tdc/src/entropy/lz_streams.c:1736:24: warning: unused function 'lzs_br_read_fast' [-Wunused-function] 1736 | static inline uint32_t lzs_br_read_fast(lzs_br *br, uint32_t nb) { | ^~~~~~~~~~~~~~~~ tdc/src/entropy/lz_streams.c:2061:19: warning: unused function 'lzs_reconstruct_symbols' [-Wunused-function] 2061 | static tdc_status lzs_reconstruct_symbols(const uint8_t *ll_dec, | ^~~~~~~~~~~~~~~~~~~~~~~ 12 warnings generated. clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/entropy/mf_btree.c -o tdc/src/entropy/mf_btree.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/entropy/mf_hashchain.c -o tdc/src/entropy/mf_hashchain.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/entropy/none.c -o tdc/src/entropy/none.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/format/block_record.c -o tdc/src/format/block_record.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/format/header.c -o tdc/src/format/header.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/format/metadata.c -o tdc/src/format/metadata.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/format/rowgroup.c -o tdc/src/format/rowgroup.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/format/schema.c -o tdc/src/format/schema.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/format/stats.c -o tdc/src/format/stats.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/layout/tiling.c -o tdc/src/layout/tiling.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/layout/traverse.c -o tdc/src/layout/traverse.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/model/delta1d.c -o tdc/src/model/delta1d.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/model/delta2_1d.c -o tdc/src/model/delta2_1d.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/model/dict.c -o tdc/src/model/dict.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/model/dict_numeric.c -o tdc/src/model/dict_numeric.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/model/fpc1d.c -o tdc/src/model/fpc1d.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/model/plane2d.c -o tdc/src/model/plane2d.o tdc/src/model/plane2d.c:764:18: warning: variable 'n_nonzero' set but not used [-Wunused-but-set-variable] 764 | uint64_t n_nonzero = 0; | ^ tdc/src/model/plane2d.c:765:18: warning: variable 'energy' set but not used [-Wunused-but-set-variable] 765 | uint64_t energy = 0; | ^ 2 warnings generated. clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/model/pred2d.c -o tdc/src/model/pred2d.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/model/pred3d.c -o tdc/src/model/pred3d.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/model/pred3d_float.c -o tdc/src/model/pred3d_float.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/model/quantize_pred2d.c -o tdc/src/model/quantize_pred2d.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/model/raw.c -o tdc/src/model/raw.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/model/sparse_zero_1d.c -o tdc/src/model/sparse_zero_1d.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/model/stack2d.c -o tdc/src/model/stack2d.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/symbols/residuals.c -o tdc/src/symbols/residuals.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/symbols/runs.c -o tdc/src/symbols/runs.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/transform/bitshuffle.c -o tdc/src/transform/bitshuffle.o tdc/src/transform/bitshuffle.c:190:13: warning: unused function 'bitshuffle_scatter' [-Wunused-function] 190 | static void bitshuffle_scatter(uint8_t *dst, const uint8_t *src, | ^~~~~~~~~~~~~~~~~~ tdc/src/transform/bitshuffle.c:219:13: warning: unused function 'bitshuffle_gather' [-Wunused-function] 219 | static void bitshuffle_gather(uint8_t *dst, const uint8_t *src, | ^~~~~~~~~~~~~~~~~ 2 warnings generated. clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/transform/complement.c -o tdc/src/transform/complement.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/transform/quantize.c -o tdc/src/transform/quantize.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/transform/shuffle.c -o tdc/src/transform/shuffle.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c tdc/src/transform/zigzag.c -o tdc/src/transform/zigzag.o clang-23 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/libgeos/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I./tdc/include -fpic -g -O3 -Wall -pedantic -c miniz/miniz.c -o miniz/miniz.o miniz/miniz.c:3185:9: warning: Using fopen, ftello, fseeko, stat() etc. path for file I/O - this path may not support large files. [-W#pragma-messages] 3185 | #pragma message("Using fopen, ftello, fseeko, stat() etc. path for file I/O - this path may not support large files.") | ^ 1 warning generated. clang-23 -std=gnu23 -shared -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -Wl,-O1 -o vectra.so agg_ops.o agg_spill.o array.o batch.o bed_scan.o block.o builder.o byte_reader.o coerce.o collect.o concat.o csv_scan.o csv_write.o dropcol.o edt.o error.o expr.o expr_datetime.o expr_geom.o expr_seq.o expr_string.o expr_vec.o fasta_scan.o feature_knn.o file_map.o filter.o focal.o fuzzy_join.o group_agg.o group_topn.o hash.o init.o interval_join.o join.o join_partition.o key_arena.o key_snap.o kmer.o libgeos.o limit.o network.o node_rows.o optimize.o project.o r_bridge.o r_bridge_core.o r_bridge_index.o r_bridge_io.o r_bridge_nodes.o r_bridge_raster.o rasterize.o rec_spill.o rowid.o scalar_ops.o scan.o schema.o sort.o sql_scan.o sql_write.o sqlite_format.o tiff_format.o tiff_scan.o tiff_write.o topn.o vec_raster.o vtr1_tdc.o vtr_append.o vtr_append_cols.o vtr_codec_tdc.o vtr_delete.o vtr_diff.o vtr_fileops.o vtr_geos.o vtr_overlay.o vtr_spatial.o vtr_write.o vtri.o warp.o window.o tdc/src/api/decode.o tdc/src/api/decode_dict.o tdc/src/api/decode_ex.o tdc/src/api/decode_impl.o tdc/src/api/decode_into.o tdc/src/api/decode_varlen.o tdc/src/api/encode.o tdc/src/api/pushpull_decode.o tdc/src/api/pushpull_encode.o tdc/src/api/stream_decode.o tdc/src/api/stream_encode.o tdc/src/core/arena.o tdc/src/core/block.o tdc/src/core/decode_profile.o tdc/src/core/error.o tdc/src/core/registry.o tdc/src/core/stream.o tdc/src/core/version.o tdc/src/entropy/deflate.o tdc/src/entropy/fse.o tdc/src/entropy/huffman.o tdc/src/entropy/huffman4.o tdc/src/entropy/lane.o tdc/src/entropy/lz.o tdc/src/entropy/lz_opt.o tdc/src/entropy/lz_streams.o tdc/src/entropy/mf_btree.o tdc/src/entropy/mf_hashchain.o tdc/src/entropy/none.o tdc/src/format/block_record.o tdc/src/format/header.o tdc/src/format/metadata.o tdc/src/format/rowgroup.o tdc/src/format/schema.o tdc/src/format/stats.o tdc/src/layout/tiling.o tdc/src/layout/traverse.o tdc/src/model/delta1d.o tdc/src/model/delta2_1d.o tdc/src/model/dict.o tdc/src/model/dict_numeric.o tdc/src/model/fpc1d.o tdc/src/model/plane2d.o tdc/src/model/pred2d.o tdc/src/model/pred3d.o tdc/src/model/pred3d_float.o tdc/src/model/quantize_pred2d.o tdc/src/model/raw.o tdc/src/model/sparse_zero_1d.o tdc/src/model/stack2d.o tdc/src/symbols/residuals.o tdc/src/symbols/runs.o tdc/src/transform/bitshuffle.o tdc/src/transform/complement.o tdc/src/transform/quantize.o tdc/src/transform/shuffle.o tdc/src/transform/zigzag.o miniz/miniz.o -fopenmp -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpKreJZe/R.INSTALL3a01f670f53b86/vectra/src' make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpKreJZe/R.INSTALL3a01f670f53b86/vectra/src' make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpKreJZe/R.INSTALL3a01f670f53b86/vectra/src' installing to /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/00LOCK-vectra/00new/vectra/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (vectra)