* installing to library ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages’ * installing *source* package ‘vapour’ ... ** this is package ‘vapour’ version ‘0.11.0’ ** package ‘vapour’ successfully unpacked and MD5 sums checked ** using staged installation configure: CC: clang-19 -std=gnu23 configure: CXX: clang++-19 -std=gnu++17 checking for gdal-config... /usr/bin/gdal-config checking gdal-config usability... yes configure: GDAL: 3.10.3 checking GDAL version >= 2.0.1... yes checking for gcc... clang-19 -std=gnu23 checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether clang-19 -std=gnu23 accepts -g... yes checking for clang-19 -std=gnu23 option to accept ISO C89... unsupported checking how to run the C preprocessor... clang-19 -std=gnu23 -E checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking gdal.h usability... yes checking gdal.h presence... yes checking for gdal.h... yes checking GDAL: linking with --libs only... yes checking GDAL: checking whether PROJ is available for linking:... yes checking GDAL: checking whether PROJ is available for running:... yes configure: GDAL: 3.10.3 configure: pkg-config proj exists, will use it configure: using proj.h. configure: PROJ: 9.6.0 configure: LIBS: -lproj -L/usr/lib/x86_64-linux-gnu -lgdal checking PROJ: checking whether PROJ and sqlite3 are available for linking:... yes configure: Package CPP flags: -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DHAVE_PROJ_H -I/usr/include/gdal configure: Package LIBS: -L/usr/lib/x86_64-linux-gnu -lgdal -lproj configure: creating ./config.status config.status: creating src/Makevars ** libs using C++ compiler: ‘Debian clang version 19.1.7 (3+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpoHzhdt/R.INSTALL414beaa7c444/vapour/src' clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DHAVE_PROJ_H -I/usr/include/gdal -I../inst/include/ -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c 000-stream.cpp -o 000-stream.o In file included from 000-stream.cpp:2: ../inst/include/gdalarrowstream/gdalvectorstream.h:153:8: warning: variable 'use_extent_filter' set but not used [-Wunused-but-set-variable] 153 | bool use_extent_filter = false; | ^ ../inst/include/gdalarrowstream/gdalvectorstream.h:239:18: warning: unused variable 'poDS' [-Wunused-variable] 239 | OGRDataSource* poDS = (OGRDataSource*)(R_ExternalPtrAddr(prep[0])); | ^~~~ ../inst/include/gdalarrowstream/gdalvectorstream.h:247:7: warning: variable 'wkt_out' is used uninitialized whenever 'if' condition is false [-Wsometimes-uninitialized] 247 | if (crs) { | ^~~ ../inst/include/gdalarrowstream/gdalvectorstream.h:253:11: note: uninitialized use occurs here 253 | CPLFree(wkt_out); | ^~~~~~~ ../inst/include/gdalarrowstream/gdalvectorstream.h:247:3: note: remove the 'if' if its condition is always true 247 | if (crs) { | ^~~~~~~~ 248 | crs->exportToWkt(&wkt_out); 249 | wkt_str = wkt_out; 250 | } else { | ~~~~~~ 251 | wkt_str = ""; | ~~~~~~~~~~~~~ 252 | } | ~ ../inst/include/gdalarrowstream/gdalvectorstream.h:245:16: note: initialize the variable 'wkt_out' to silence this warning 245 | char* wkt_out; | ^ | = nullptr 3 warnings generated. clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DHAVE_PROJ_H -I/usr/include/gdal -I../inst/include/ -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c 000-warpgeneral.cpp -o 000-warpgeneral.o clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DHAVE_PROJ_H -I/usr/include/gdal -I../inst/include/ -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c 00_config.cpp -o 00_config.o clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DHAVE_PROJ_H -I/usr/include/gdal -I../inst/include/ -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c 00_gdal.cpp -o 00_gdal.o clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DHAVE_PROJ_H -I/usr/include/gdal -I../inst/include/ -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c 00_geometry.cpp -o 00_geometry.o clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DHAVE_PROJ_H -I/usr/include/gdal -I../inst/include/ -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c 00_raster.cpp -o 00_raster.o clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DHAVE_PROJ_H -I/usr/include/gdal -I../inst/include/ -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c 00_raster_block_io.cpp -o 00_raster_block_io.o In file included from 00_raster_block_io.cpp:2: ../inst/include/gdalreadwrite/gdalreadwrite.h:105:10: warning: unused variable 'err' [-Wunused-variable] 105 | OGRErr err = oSRS.exportToWkt(&pszWKT, optionsWKT); | ^~~ 00_raster_block_io.cpp:71:10: warning: variable 'err' set but not used [-Wunused-but-set-variable] 71 | CPLErr err; | ^ 2 warnings generated. clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DHAVE_PROJ_H -I/usr/include/gdal -I../inst/include/ -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c 00_utils.cpp -o 00_utils.o clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DHAVE_PROJ_H -I/usr/include/gdal -I../inst/include/ -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c 00_vrt.cpp -o 00_vrt.o clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DHAVE_PROJ_H -I/usr/include/gdal -I../inst/include/ -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c RcppExports.cpp -o RcppExports.o clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DHAVE_PROJ_H -I/usr/include/gdal -I../inst/include/ -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c warp_file.cpp -o warp_file.o clang++-19 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -Wl,-O1 -o vapour.so 000-stream.o 000-warpgeneral.o 00_config.o 00_gdal.o 00_geometry.o 00_raster.o 00_raster_block_io.o 00_utils.o 00_vrt.o RcppExports.o warp_file.o -L/usr/lib/x86_64-linux-gnu -lgdal -lproj -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpoHzhdt/R.INSTALL414beaa7c444/vapour/src' make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpoHzhdt/R.INSTALL414beaa7c444/vapour/src' make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpoHzhdt/R.INSTALL414beaa7c444/vapour/src' installing to /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/00LOCK-vapour/00new/vapour/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (vapour)