• using R Under development (unstable) (2022-06-18 r82503)
• using platform: x86_64-pc-linux-gnu (64-bit)
• using session charset: ISO8859-15
• checking for file 'updog/DESCRIPTION' ... OK
• this is package 'updog' version '2.1.2'
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking serialization versions ... OK
• checking whether package 'updog' can be installed ... WARNING
  Found the following significant warnings:
    betabinom.cpp:144:7: warning: use of bitwise '&' with boolean operands [-Wbitwise-instead-of-logical]
    betabinom.cpp:147:7: warning: use of bitwise '&' with boolean operands [-Wbitwise-instead-of-logical]
    betabinom.cpp:150:7: warning: use of bitwise '&' with boolean operands [-Wbitwise-instead-of-logical]
    betabinom.cpp:153:7: warning: use of bitwise '&' with boolean operands [-Wbitwise-instead-of-logical]
    betabinom.cpp:267:7: warning: use of bitwise '&' with boolean operands [-Wbitwise-instead-of-logical]
    betabinom.cpp:270:7: warning: use of bitwise '&' with boolean operands [-Wbitwise-instead-of-logical]
    betabinom.cpp:273:7: warning: use of bitwise '&' with boolean operands [-Wbitwise-instead-of-logical]
    betabinom.cpp:276:7: warning: use of bitwise '&' with boolean operands [-Wbitwise-instead-of-logical]
    betabinom.cpp:385:7: warning: use of bitwise '&' with boolean operands [-Wbitwise-instead-of-logical]
    betabinom.cpp:388:7: warning: use of bitwise '&' with boolean operands [-Wbitwise-instead-of-logical]
    betabinom.cpp:391:7: warning: use of bitwise '&' with boolean operands [-Wbitwise-instead-of-logical]
    betabinom.cpp:460:7: warning: use of bitwise '&' with boolean operands [-Wbitwise-instead-of-logical]
    betabinom.cpp:463:7: warning: use of bitwise '&' with boolean operands [-Wbitwise-instead-of-logical]
    betabinom.cpp:466:7: warning: use of bitwise '&' with boolean operands [-Wbitwise-instead-of-logical]
    gradients.cpp:409:9: warning: use of bitwise '&' with boolean operands [-Wbitwise-instead-of-logical]
    objective.cpp:463:11: warning: use of bitwise '&' with boolean operands [-Wbitwise-instead-of-logical]
    util_funs.cpp:46:7: warning: use of bitwise '&' with boolean operands [-Wbitwise-instead-of-logical]
    util_funs.cpp:110:7: warning: use of bitwise '&' with boolean operands [-Wbitwise-instead-of-logical]
    util_funs.cpp:113:7: warning: use of bitwise '&' with boolean operands [-Wbitwise-instead-of-logical]
  See https://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-debian-clang/updog-00install.html for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking 'build' directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the namespace can be loaded with stated dependencies ... OK
• checking whether the namespace can be unloaded cleanly ... OK
• checking loading without being on the library search path ... OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [20s/27s] OK
• checking Rd files ... [1s/2s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of 'data' directory ... OK
• checking data for non-ASCII characters ... OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking line endings in C/C++/Fortran sources/headers ... OK
• checking line endings in Makefiles ... OK
• checking compilation flags in Makevars ... OK
• checking for GNU extensions in Makefiles ... OK
• checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
• checking use of PKG_*FLAGS in Makefiles ... OK
• checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
• checking pragmas in C/C++ headers and code ... OK
• checking compilation flags used ... OK
• checking compiled code ... OK
• checking installed files from 'inst/doc' ... OK
• checking files in 'vignettes' ... OK
• checking examples ... [5s/6s] OK
• checking for unstated dependencies in 'tests' ... OK
• checking tests ... [11s/14s] OK
    Running 'testthat.R' [11s/14s]
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes in 'inst/doc' ... OK
• checking re-building of vignette outputs ... [29s/50s] OK
• checking PDF version of manual ... OK
• checking for non-standard things in the check directory ... OK
• DONE

Status: 1 WARNING