Install log for 'tgp'

* installing to library ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages’
* installing *source* package ‘tgp’ ...
** package ‘tgp’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘Debian clang version 18.1.4 (1)’
using C++ compiler: ‘Debian clang version 18.1.4 (1)’
make[1]: Entering directory '/tmp/RtmpQQWHG5/R.INSTALLa12dd33dc0c6c/tgp/src'
clang-18 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DRPRINT  -fpic  -g -O3 -Wall -pedantic -c all_draws.c -o all_draws.o
clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DRPRINT  -fpic  -g -O3 -Wall -pedantic  -c base.cc -o base.o
clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DRPRINT  -fpic  -g -O3 -Wall -pedantic  -c corr.cc -o corr.o
clang-18 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DRPRINT  -fpic  -g -O3 -Wall -pedantic -c dopt.c -o dopt.o
clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DRPRINT  -fpic  -g -O3 -Wall -pedantic  -c exp.cc -o exp.o
clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DRPRINT  -fpic  -g -O3 -Wall -pedantic  -c exp_sep.cc -o exp_sep.o
clang-18 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DRPRINT  -fpic  -g -O3 -Wall -pedantic -c gen_covar.c -o gen_covar.o
clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DRPRINT  -fpic  -g -O3 -Wall -pedantic  -c gp.cc -o gp.o
clang-18 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DRPRINT  -fpic  -g -O3 -Wall -pedantic -c init.c -o init.o
clang-18 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DRPRINT  -fpic  -g -O3 -Wall -pedantic -c lh.c -o lh.o
clang-18 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DRPRINT  -fpic  -g -O3 -Wall -pedantic -c lik_post.c -o lik_post.o
clang-18 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DRPRINT  -fpic  -g -O3 -Wall -pedantic -c linalg.c -o linalg.o
clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DRPRINT  -fpic  -g -O3 -Wall -pedantic  -c list.cc -o list.o
clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DRPRINT  -fpic  -g -O3 -Wall -pedantic  -c matern.cc -o matern.o
clang-18 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DRPRINT  -fpic  -g -O3 -Wall -pedantic -c matrix.c -o matrix.o
clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DRPRINT  -fpic  -g -O3 -Wall -pedantic  -c model.cc -o model.o
clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DRPRINT  -fpic  -g -O3 -Wall -pedantic  -c mr_exp_sep.cc -o mr_exp_sep.o
clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DRPRINT  -fpic  -g -O3 -Wall -pedantic  -c mstructs.cc -o mstructs.o
clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DRPRINT  -fpic  -g -O3 -Wall -pedantic  -c params.cc -o params.o
clang-18 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DRPRINT  -fpic  -g -O3 -Wall -pedantic -c predict.c -o predict.o
clang-18 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DRPRINT  -fpic  -g -O3 -Wall -pedantic -c predict_linear.c -o predict_linear.o
clang-18 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DRPRINT  -fpic  -g -O3 -Wall -pedantic -c rand_draws.c -o rand_draws.o
clang-18 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DRPRINT  -fpic  -g -O3 -Wall -pedantic -c rand_pdf.c -o rand_pdf.o
clang-18 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DRPRINT  -fpic  -g -O3 -Wall -pedantic -c randomkit.c -o randomkit.o
clang-18 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DRPRINT  -fpic  -g -O3 -Wall -pedantic -c rhelp.c -o rhelp.o
clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DRPRINT  -fpic  -g -O3 -Wall -pedantic  -c sim.cc -o sim.o
clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DRPRINT  -fpic  -g -O3 -Wall -pedantic  -c temper.cc -o temper.o
clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DRPRINT  -fpic  -g -O3 -Wall -pedantic  -c tgp.cc -o tgp.o
clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DRPRINT  -fpic  -g -O3 -Wall -pedantic  -c tree.cc -o tree.o
tree.cc:1142:7: warning: variable 'numLeaves' set but not used [-Wunused-but-set-variable]
 1142 |   int numLeaves = leaves(&first, &last);
      |       ^
tree.cc:1186:7: warning: variable 'numLeaves' set but not used [-Wunused-but-set-variable]
 1186 |   int numLeaves = leaves(&first, &last);
      |       ^
2 warnings generated.
clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -DRPRINT  -fpic  -g -O3 -Wall -pedantic  -c twovar.cc -o twovar.o
clang++-18 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -Wl,-O1 -o tgp.so all_draws.o base.o corr.o dopt.o exp.o exp_sep.o gen_covar.o gp.o init.o lh.o lik_post.o linalg.o list.o matern.o matrix.o model.o mr_exp_sep.o mstructs.o params.o predict.o predict_linear.o rand_draws.o rand_pdf.o randomkit.o rhelp.o sim.o temper.o tgp.o tree.o twovar.o -llapack -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lRblas -L/usr/lib/llvm-18/lib -lFortran_main -lFortranRuntime -lFortranDecimal -lm -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lR
make[1]: Leaving directory '/tmp/RtmpQQWHG5/R.INSTALLa12dd33dc0c6c/tgp/src'
make[1]: Entering directory '/tmp/RtmpQQWHG5/R.INSTALLa12dd33dc0c6c/tgp/src'
make[1]: Leaving directory '/tmp/RtmpQQWHG5/R.INSTALLa12dd33dc0c6c/tgp/src'
installing to /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/00LOCK-tgp/00new/tgp/libs
** R
** data
** demo
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (tgp)