* installing to library ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages’ * installing *source* package ‘stelfi’ ... ** this is package ‘stelfi’ version ‘1.0.2’ ** package ‘stelfi’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘Debian clang version 19.1.7 (3+b2)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpDfMYf3/R.INSTALL2a5d2a55ca8292/stelfi/src' clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -DTMBAD_FRAMEWORK -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/TMB/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c stelfi.cpp -o stelfi.o In file included from stelfi.cpp:2: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/TMB/include/TMB.hpp:96: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from stelfi.cpp:2: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/TMB/include/TMB.hpp:96: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from stelfi.cpp:14: ./spatial_hawkes.h:276:12: warning: unused variable 'gamma_ratio' [-Wunused-variable] 276 | Type gamma_ratio = (sum(lambdaXsasep) + D) / gammac; | ^~~~~~~~~~~ stelfi.cpp:44:12: note: in instantiation of function template specialization 'spatial_hawkes<TMBad::global::ad_aug>' requested here 44 | return spatial_hawkes(this); | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/TMB/include/tmb_core.hpp:1281:6: note: in instantiation of member function 'objective_function<TMBad::global::ad_aug>::operator()' requested here 1281 | F(); // Run through user template (modifies reportvector) | ^ In file included from stelfi.cpp:14: ./spatial_hawkes.h:291:16: warning: unused variable 'before' [-Wunused-variable] 291 | Type before = gammac; | ^~~~~~ ./spatial_hawkes.h:321:22: warning: unused variable 'before' [-Wunused-variable] 321 | Type before = gammac; | ^~~~~~ ./spatial_hawkes.h:276:12: warning: unused variable 'gamma_ratio' [-Wunused-variable] 276 | Type gamma_ratio = (sum(lambdaXsasep) + D) / gammac; | ^~~~~~~~~~~ stelfi.cpp:44:12: note: in instantiation of function template specialization 'spatial_hawkes<double>' requested here 44 | return spatial_hawkes(this); | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/TMB/include/tmb_core.hpp:2035:34: note: in instantiation of member function 'objective_function<double>::operator()' requested here 2035 | PROTECT( res = asSEXP( pf->operator()() ) ); | ^ In file included from stelfi.cpp:14: ./spatial_hawkes.h:291:16: warning: unused variable 'before' [-Wunused-variable] 291 | Type before = gammac; | ^~~~~~ ./spatial_hawkes.h:321:22: warning: unused variable 'before' [-Wunused-variable] 321 | Type before = gammac; | ^~~~~~ 9 warnings generated. clang++-19 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -Wl,-O1 -o stelfi.so stelfi.o -fopenmp -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpDfMYf3/R.INSTALL2a5d2a55ca8292/stelfi/src' make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpDfMYf3/R.INSTALL2a5d2a55ca8292/stelfi/src' make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpDfMYf3/R.INSTALL2a5d2a55ca8292/stelfi/src' installing to /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/00LOCK-stelfi/00new/stelfi/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (stelfi)