* installing to library '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages' * installing *source* package 'srm' ... ** package 'srm' successfully unpacked and MD5 sums checked ** using staged installation ** libs make[1]: Entering directory '/tmp/Rtmp4QUrmc/R.INSTALL3712c473d99ce3/srm/src' clang++-14 -std=gnu++14 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I../inst/include -DBOOST_NO_LONG_LONG -DBOOST_NO_AUTO_PTR -DRCPP_USE_UNWIND_PROTECT -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=2 -fpic -g -O3 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o clang++-14 -std=gnu++14 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I../inst/include -DBOOST_NO_LONG_LONG -DBOOST_NO_AUTO_PTR -DRCPP_USE_UNWIND_PROTECT -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=2 -fpic -g -O3 -Wall -pedantic -mtune=native -c SRM_RCPP_SIGMA_Y_INV_WOODBURY.cpp -o SRM_RCPP_SIGMA_Y_INV_WOODBURY.o clang++-14 -std=gnu++14 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I../inst/include -DBOOST_NO_LONG_LONG -DBOOST_NO_AUTO_PTR -DRCPP_USE_UNWIND_PROTECT -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=2 -fpic -g -O3 -Wall -pedantic -mtune=native -c SRM_RCPP_SRM_ARBSRM.cpp -o SRM_RCPP_SRM_ARBSRM.o SRM_RCPP_SRM_ARBSRM.cpp:83:18: warning: use of bitwise '|' with boolean operands [-Wbitwise-instead-of-logical] if ( ( x(ii,hh)!=0 ) | (y(ii,hh)!= 0 ) ){ ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ || SRM_RCPP_SRM_ARBSRM.cpp:83:18: note: cast one or both operands to int to silence this warning SRM_RCPP_SRM_ARBSRM.cpp:90:18: warning: use of bitwise '|' with boolean operands [-Wbitwise-instead-of-logical] if ( ( x(hh,ii)!=0 ) | (y(hh,ii)!= 0 ) ){ ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ || SRM_RCPP_SRM_ARBSRM.cpp:90:18: note: cast one or both operands to int to silence this warning SRM_RCPP_SRM_ARBSRM.cpp:189:17: warning: use of bitwise '|' with boolean operands [-Wbitwise-instead-of-logical] if ((inde(i,0)!=inde(j,0)) | (inde(i,1)!=inde(j,1))) { ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ || SRM_RCPP_SRM_ARBSRM.cpp:189:17: note: cast one or both operands to int to silence this warning SRM_RCPP_SRM_ARBSRM.cpp:190:21: warning: use of bitwise '&' with boolean operands [-Wbitwise-instead-of-logical] if ((inde(i,0)==inde(j,1)) & (inde(i,1)==inde(j,0))){ ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ && SRM_RCPP_SRM_ARBSRM.cpp:190:21: note: cast one or both operands to int to silence this warning SRM_RCPP_SRM_ARBSRM.cpp:230:17: warning: use of bitwise '&' with boolean operands [-Wbitwise-instead-of-logical] if ((recip(inde(i,0),inde(i,1))!=0) & (recip(inde(j,0),inde(j,1))!=0)){ ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ && SRM_RCPP_SRM_ARBSRM.cpp:230:17: note: cast one or both operands to int to silence this warning SRM_RCPP_SRM_ARBSRM.cpp:231:21: warning: use of bitwise '&' with boolean operands [-Wbitwise-instead-of-logical] if ((inde(i,0)==inde(j,1)) & (inde(i,1)==inde(j,0))){ ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ && SRM_RCPP_SRM_ARBSRM.cpp:231:21: note: cast one or both operands to int to silence this warning SRM_RCPP_SRM_ARBSRM.cpp:235:21: warning: use of bitwise '&' with boolean operands [-Wbitwise-instead-of-logical] if ((inde(i,0)!=inde(j,1)) & (inde(i,1)==inde(j,0))){ ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ && SRM_RCPP_SRM_ARBSRM.cpp:235:21: note: cast one or both operands to int to silence this warning SRM_RCPP_SRM_ARBSRM.cpp:238:21: warning: use of bitwise '&' with boolean operands [-Wbitwise-instead-of-logical] if ((inde(i,0)==inde(j,1)) & (inde(i,1)!=inde(j,0))){ ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ && SRM_RCPP_SRM_ARBSRM.cpp:238:21: note: cast one or both operands to int to silence this warning 8 warnings generated. clang++-14 -std=gnu++14 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I../inst/include -DBOOST_NO_LONG_LONG -DBOOST_NO_AUTO_PTR -DRCPP_USE_UNWIND_PROTECT -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=2 -fpic -g -O3 -Wall -pedantic -mtune=native -c SRM_RCPP_SRM_COMPUTE_HESSIAN_RR.cpp -o SRM_RCPP_SRM_COMPUTE_HESSIAN_RR.o clang++-14 -std=gnu++14 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I../inst/include -DBOOST_NO_LONG_LONG -DBOOST_NO_AUTO_PTR -DRCPP_USE_UNWIND_PROTECT -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=2 -fpic -g -O3 -Wall -pedantic -mtune=native -c SRM_RCPP_SRM_COMPUTE_LOG_LIKELIHOOD_GRADIENT.cpp -o SRM_RCPP_SRM_COMPUTE_LOG_LIKELIHOOD_GRADIENT.o clang++-14 -std=gnu++14 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I../inst/include -DBOOST_NO_LONG_LONG -DBOOST_NO_AUTO_PTR -DRCPP_USE_UNWIND_PROTECT -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=2 -fpic -g -O3 -Wall -pedantic -mtune=native -c SRM_RCPP_SRM_COMPUTE_NONZERO_GRADIENT.cpp -o SRM_RCPP_SRM_COMPUTE_NONZERO_GRADIENT.o clang++-14 -std=gnu++14 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I../inst/include -DBOOST_NO_LONG_LONG -DBOOST_NO_AUTO_PTR -DRCPP_USE_UNWIND_PROTECT -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=2 -fpic -g -O3 -Wall -pedantic -mtune=native -c SRM_RCPP_SRM_DATA_LIST_INSERTION_MATRIX.cpp -o SRM_RCPP_SRM_DATA_LIST_INSERTION_MATRIX.o clang++-14 -std=gnu++14 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I../inst/include -DBOOST_NO_LONG_LONG -DBOOST_NO_AUTO_PTR -DRCPP_USE_UNWIND_PROTECT -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=2 -fpic -g -O3 -Wall -pedantic -mtune=native -c SRM_RCPP_SRM_MAKE_DATA_LIST.cpp -o SRM_RCPP_SRM_MAKE_DATA_LIST.o clang++-14 -std=gnu++14 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I../inst/include -DBOOST_NO_LONG_LONG -DBOOST_NO_AUTO_PTR -DRCPP_USE_UNWIND_PROTECT -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=2 -fpic -g -O3 -Wall -pedantic -mtune=native -c SRM_RCPP_SRM_ULS_GRADIENT.cpp -o SRM_RCPP_SRM_ULS_GRADIENT.o clang++-14 -std=gnu++14 -shared -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -Wl,-O1 -o srm.so RcppExports.o SRM_RCPP_SIGMA_Y_INV_WOODBURY.o SRM_RCPP_SRM_ARBSRM.o SRM_RCPP_SRM_COMPUTE_HESSIAN_RR.o SRM_RCPP_SRM_COMPUTE_LOG_LIKELIHOOD_GRADIENT.o SRM_RCPP_SRM_COMPUTE_NONZERO_GRADIENT.o SRM_RCPP_SRM_DATA_LIST_INSERTION_MATRIX.o SRM_RCPP_SRM_MAKE_DATA_LIST.o SRM_RCPP_SRM_ULS_GRADIENT.o -llapack -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lRblas -L/usr/lib/gcc/x86_64-linux-gnu/11 -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lR make[1]: Leaving directory '/tmp/Rtmp4QUrmc/R.INSTALL3712c473d99ce3/srm/src' make[1]: Entering directory '/tmp/Rtmp4QUrmc/R.INSTALL3712c473d99ce3/srm/src' make[1]: Leaving directory '/tmp/Rtmp4QUrmc/R.INSTALL3712c473d99ce3/srm/src' installing to /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/00LOCK-srm/00new/srm/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (srm)