* installing to library ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages’
* installing *source* package ‘signalHsmm’ ...
** this is package ‘signalHsmm’ version ‘1.5’
** package ‘signalHsmm’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘Debian clang version 22.1.8 (1+b2)’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpUobxlA/R.INSTALL27f4b97b3f3a6b/signalHsmm/src'
clang++-22 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic   -c RcppExports.cpp -o RcppExports.o
clang++-22 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic   -c duration_viterbi.cpp -o duration_viterbi.o
clang++-22 -std=gnu++20 -shared -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -Wl,-O1 -o signalHsmm.so RcppExports.o duration_viterbi.o -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpUobxlA/R.INSTALL27f4b97b3f3a6b/signalHsmm/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpUobxlA/R.INSTALL27f4b97b3f3a6b/signalHsmm/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpUobxlA/R.INSTALL27f4b97b3f3a6b/signalHsmm/src'
installing to /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/00LOCK-signalHsmm/00new/signalHsmm/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Warning in structure(list(`1` = c("R", "N", "D", "Q", "E", "H", "K"), `2` = c("G",  :
  Replacing special names ‘.Names’ is deprecated; use ‘names’ instead.
Warning in structure(c(0, 0, 0, 0, 1, 0, 0, 0, 0, 1, 0, 0, 0, 0, 1, 0),  :
  Replacing special names ‘.Dim’ is deprecated; use ‘dim’ instead.
Warning in structure(c(0.282182230869001, 0.0128884115403133, 0.20406633561323,  :
  Replacing special names ‘.Dim’ is deprecated; use ‘dim’ instead.
Warning in structure(c(-1.11328712008703, -1.1685797676654, -1.34674657905895,  :
  Replacing special names ‘.Names’ is deprecated; use ‘names’ instead.
Warning in structure(c(0.0946771378708551, 0.18804537521815, 0.191972076788831,  :
  Replacing special names ‘.Dim’, ‘.Dimnames’ is deprecated; use ‘dim’, ‘dimnames’ instead.
Warning in structure(list(aa_group = structure(list(`1` = c("R", "N", "D",  :
  Replacing special names ‘.Names’ is deprecated; use ‘names’ instead.
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (signalHsmm)