• using R Under development (unstable) (2023-05-27 r84465)
• using platform: x86_64-pc-linux-gnu
• R was compiled by
      Debian clang version 15.0.6
      GNU Fortran (Debian 12.2.0-14) 12.2.0
• running under: Debian GNU/Linux 12 (bookworm)
• using session charset: UTF-8
• checking for file ‘samr/DESCRIPTION’ ... OK
• this is package ‘samr’ version ‘3.0’
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking serialization versions ... OK
• checking whether package ‘samr’ can be installed ... OK
• used C compiler: ‘Debian clang version 15.0.6’
• used Fortran compiler: ‘GNU Fortran (Debian 12.2.0-14) 12.2.0’
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [2s/3s] OK
• checking whether the package can be loaded with stated dependencies ... [1s/2s] OK
• checking whether the package can be unloaded cleanly ... [2s/2s] OK
• checking whether the namespace can be loaded with stated dependencies ... [1s/2s] OK
• checking whether the namespace can be unloaded cleanly ... [2s/3s] OK
• checking loading without being on the library search path ... [2s/2s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [22s/27s] OK
• checking Rd files ... [1s/1s] NOTE
  checkRd: (-1) SAM.Rd:67: Escaped LaTeX specials: \$
  checkRd: (-1) samr.Rd:59: Escaped LaTeX specials: \$
  checkRd: (-1) samr.Rd:84: Escaped LaTeX specials: \# \$
  checkRd: (-1) samr.Rd:88: Escaped LaTeX specials: \$
  checkRd: (-1) samr.Rd:92: Escaped LaTeX specials: \$
  checkRd: (-1) samr.Rd:97: Escaped LaTeX specials: \#
  checkRd: (-1) samr.assess.samplesize.plot.Rd:12: Escaped LaTeX specials: \#
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking line endings in C/C++/Fortran sources/headers ... OK
• checking pragmas in C/C++ headers and code ... OK
• checking compilation flags used ... OK
• checking compiled code ... OK
• checking sizes of PDF files under ‘inst/doc’ ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking examples ... [35s/41s] OK
  Examples with CPU (user + system) or elapsed time > 5s
           user system elapsed
  SAMseq 11.348 0.342 13.008
  samr 7.773 0.099 9.321
  SAM 5.856 0.221 6.814
• checking PDF version of manual ... [6s/9s] OK
• checking HTML version of manual ... [1s/1s] OK
• checking for non-standard things in the check directory ... OK
• DONE

Status: 1 NOTE