• using R Under development (unstable) (2025-12-18 r89199)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     Debian clang version 21.1.7 (1)     Debian flang version 21.1.7 (1)
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8
• checking for file ‘report/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘report’ version ‘0.6.2’
• package encoding: UTF-8
• checking CRAN incoming feasibility ... [2s/2s] OK
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘report’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [0s/0s] OK
• checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
• checking whether the package can be unloaded cleanly ... [0s/0s] OK
• checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
• checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
• checking loading without being on the library search path ... [0s/0s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [33s/43s] OK
• checking Rd files ... [1s/1s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [9s/12s] ERROR Running examples in ‘report-Ex.R’ failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: report.default > ### Title: Template to add report support for new objects > ### Aliases: report.default report_effectsize.default report_table.default > ### report_statistics.default report_parameters.default > ### report_intercept.default report_model.default report_random.default > ### report_priors.default report_performance.default report_info.default > ### report_text.default > > ### ** Examples > > library(report) > > # Add a reproducible example instead of the following > model <- lm(Sepal.Length ~ Petal.Length * Species, data = iris) > r <- report(model)  *** caught segfault *** address 0x36, cause 'memory not mapped' Traceback:  1: `[.data.frame`(params_table, !is.na(params_table$Parameter), )  2: params_table[!is.na(params_table$Parameter), ]  3: .remove_performance(params_table)  4: report_statistics.lm(x, table = table, include_effectsize = include_effectsize, ...)  5: report_statistics(x, table = table, include_effectsize = include_effectsize, ...)  6: report_parameters.lm(x, table = table, include_intercept = FALSE, ...)  7: report_parameters(x, table = table, include_intercept = FALSE, ...)  8: report_text.lm(x, table = result_table, ...)  9: report_text(x, table = result_table, ...) 10: report.lm(model) 11: report(model) An irrecoverable exception occurred. R is aborting now ... Segmentation fault
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [1s/1s] OK   Running ‘testthat.R’ [0s/0s]
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [13s/18s] ERROR Error(s) in re-building vignettes:   ... --- re-building ‘cite_packages.Rmd’ using rmarkdown [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. --- finished re-building ‘cite_packages.Rmd’ --- re-building ‘new_models.Rmd’ using rmarkdown [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. --- finished re-building ‘new_models.Rmd’ --- re-building ‘report.Rmd’ using rmarkdown  *** caught segfault *** address 0x33, cause 'memory not mapped' Traceback:  1: `[.data.frame`(params_table, !is.na(params_table$Parameter), )  2: params_table[!is.na(params_table$Parameter), ]  3: .remove_performance(params_table)  4: report_statistics.lm(x, table = table, include_effectsize = include_effectsize, ...)  5: report_statistics(x, table = table, include_effectsize = include_effectsize, ...)  6: report_parameters.lm(x, table = table, include_intercept = FALSE, ...)  7: report_parameters(x, table = table, include_intercept = FALSE, ...)  8: report_text.lm(x, table = result_table, ...)  9: report_text(x, table = result_table, ...) 10: report.lm(model) 11: report(model) 12: eval(expr, envir) 13: eval(expr, envir) 14: withVisible(eval(expr, envir)) 15: withCallingHandlers(code, message = function (cnd) { watcher$capture_plot_and_output() if (on_message$capture) { watcher$push(cnd) } if (on_message$silence) { invokeRestart("muffleMessage") }}, warning = function (cnd) { if (getOption("warn") >= 2 || getOption("warn") < 0) { return() } watcher$capture_plot_and_output() if (on_warning$capture) { cnd <- sanitize_call(cnd) watcher$push(cnd) } if (on_warning$silence) { invokeRestart("muffleWarning") }}, error = function (cnd) { watcher$capture_plot_and_output() cnd <- sanitize_call(cnd) watcher$push(cnd) switch(on_error, continue = invokeRestart("eval_continue"), stop = invokeRestart("eval_stop"), error = NULL)}) 16: eval(call) 17: eval(call) 18: with_handlers({ for (expr in tle$exprs) { ev <- withVisible(eval(expr, envir)) watcher$capture_plot_and_output() watcher$print_value(ev$value, ev$visible, envir) } TRUE}, handlers) 19: doWithOneRestart(return(expr), restart) 20: withOneRestart(expr, restarts[[1L]]) 21: withRestartList(expr, restarts[-nr]) 22: doWithOneRestart(return(expr), restart) 23: withOneRestart(withRestartList(expr, restarts[-nr]), restarts[[nr]]) 24: withRestartList(expr, restarts) 25: withRestarts(with_handlers({ for (expr in tle$exprs) { ev <- withVisible(eval(expr, envir)) watcher$capture_plot_and_output() watcher$print_value(ev$value, ev$visible, envir) } TRUE}, handlers), eval_continue = function() TRUE, eval_stop = function() FALSE) 26: evaluate::evaluate(...) 27: evaluate(code, envir = env, new_device = FALSE, keep_warning = if (is.numeric(options$warning)) TRUE else options$warning, keep_message = if (is.numeric(options$message)) TRUE else options$message, stop_on_error = if (is.numeric(options$error)) options$error else { if (options$error && options$include) 0L else 2L }, output_handler = knit_handlers(options$render, options)) 28: in_dir(input_dir(), expr) 29: in_input_dir(evaluate(code, envir = env, new_device = FALSE, keep_warning = if (is.numeric(options$warning)) TRUE else options$warning, keep_message = if (is.numeric(options$message)) TRUE else options$message, stop_on_error = if (is.numeric(options$error)) options$error else { if (options$error && options$include) 0L else 2L }, output_handler = knit_handlers(options$render, options))) 30: eng_r(options) 31: block_exec(params) 32: call_block(x) 33: process_group(group) 34: withCallingHandlers(if (tangle) process_tangle(group) else process_group(group), error = function(e) { if (progress && is.function(pb$interrupt)) pb$interrupt() if (xfun::pkg_available("rlang", "1.0.0")) { if (is_R_CMD_build() || is_R_CMD_check()) { cnd = tryCatch(rlang::entrace(e), error = identity) error <<- format(cnd) } else { rlang::entrace(e) } } }) 35: xfun:::handle_error(withCallingHandlers(if (tangle) process_tangle(group) else process_group(group), error = function(e) { if (progress && is.function(pb$interrupt)) pb$interrupt() if (xfun::pkg_available("rlang", "1.0.0")) { if (is_R_CMD_build() || is_R_CMD_check()) { cnd = tryCatch(rlang::entrace(e), error = identity) error <<- format(cnd) } else { rlang::entrace(e) } } }), function(loc) { setwd(wd) write_utf8(res, output %n% stdout()) paste0("\nQuitting from ", loc, if (!is.null(error)) paste0("\n", rule(), error, "\n", rule()))}, if (labels[i] != "") sprintf(" [%s]", labels[i]), get_loc) 36: process_file(text, output) 37: knitr::knit(knit_input, knit_output, envir = envir, quiet = quiet) 38: rmarkdown::render(file, encoding = encoding, quiet = quiet, envir = globalenv(), output_dir = getwd(), ...) 39: vweave_rmarkdown(...) 40: engine$weave(file, quiet = quiet, encoding = enc) 41: doTryCatch(return(expr), name, parentenv, handler) 42: tryCatchOne(expr, names, parentenv, handlers[[1L]]) 43: tryCatchList(expr, classes, parentenv, handlers) 44: tryCatch({ engine$weave(file, quiet = quiet, encoding = enc) setwd(startdir) output <- find_vignette_product(name, by = "weave", engine = engine) if (!have.makefile && vignette_is_tex(output)) { texi2pdf(file = output, clean = FALSE, quiet = quiet) output <- find_vignette_product(name, by = "texi2pdf", engine = engine) }}, error = function(e) { OK <<- FALSE message(gettextf("Error: processing vignette '%s' failed with diagnostics:\n%s", file, conditionMessage(e)))}) 45: tools:::.buildOneVignette("report.Rmd", "/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/report.Rcheck/vign_test/report", TRUE, FALSE, "report", "UTF-8", "/home/hornik/tmp/scratch/Rtmp9dBoP8/file39915f67bfda53.rds") An irrecoverable exception occurred. R is aborting now ... Segmentation fault --- re-building ‘report_table.Rmd’ using rmarkdown  *** caught segfault *** address 0x36, cause 'memory not mapped' Traceback:  1: .check_caption_attr_name(x)  2: insight::export_table(format(x, ...), caption = caption, footer = footer, ...)  3: cat(insight::export_table(format(x, ...), caption = caption, footer = footer, ...))  4: print.report_table(x)  5: context$df_print(x)  6: knit_print.data.frame(x, ...)  7: knit_print(x, ...)  8: withVisible(knit_print(x, ...))  9: fun(x, options = options) 10: handler$value(value, visible) 11: handle_value(handler, value, visible, envir) 12: withVisible(handle_value(handler, value, visible, envir)) 13: watcher$print_value(ev$value, ev$visible, envir) 14: withCallingHandlers(code, message = function (cnd) { watcher$capture_plot_and_output() if (on_message$capture) { watcher$push(cnd) } if (on_message$silence) { invokeRestart("muffleMessage") }}, warning = function (cnd) { if (getOption("warn") >= 2 || getOption("warn") < 0) { return() } watcher$capture_plot_and_output() if (on_warning$capture) { cnd <- sanitize_call(cnd) watcher$push(cnd) } if (on_warning$silence) { invokeRestart("muffleWarning") }}, error = function (cnd) { watcher$capture_plot_and_output() cnd <- sanitize_call(cnd) watcher$push(cnd) switch(on_error, continue = invokeRestart("eval_continue"), stop = invokeRestart("eval_stop"), error = NULL)}) 15: eval(call) 16: eval(call) 17: with_handlers({ for (expr in tle$exprs) { ev <- withVisible(eval(expr, envir)) watcher$capture_plot_and_output() watcher$print_value(ev$value, ev$visible, envir) } TRUE}, handlers) 18: doWithOneRestart(return(expr), restart) 19: withOneRestart(expr, restarts[[1L]]) 20: withRestartList(expr, restarts[-nr]) 21: doWithOneRestart(return(expr), restart) 22: withOneRestart(withRestartList(expr, restarts[-nr]), restarts[[nr]]) 23: withRestartList(expr, restarts) 24: withRestarts(with_handlers({ for (expr in tle$exprs) { ev <- withVisible(eval(expr, envir)) watcher$capture_plot_and_output() watcher$print_value(ev$value, ev$visible, envir) } TRUE}, handlers), eval_continue = function() TRUE, eval_stop = function() FALSE) 25: evaluate::evaluate(...) 26: evaluate(code, envir = env, new_device = FALSE, keep_warning = if (is.numeric(options$warning)) TRUE else options$warning, keep_message = if (is.numeric(options$message)) TRUE else options$message, stop_on_error = if (is.numeric(options$error)) options$error else { if (options$error && options$include) 0L else 2L }, output_handler = knit_handlers(options$render, options)) 27: in_dir(input_dir(), expr) 28: in_input_dir(evaluate(code, envir = env, new_device = FALSE, keep_warning = if (is.numeric(options$warning)) TRUE else options$warning, keep_message = if (is.numeric(options$message)) TRUE else options$message, stop_on_error = if (is.numeric(options$error)) options$error else { if (options$error && options$include) 0L else 2L }, output_handler = knit_handlers(options$render, options))) 29: eng_r(options) 30: block_exec(params) 31: call_block(x) 32: process_group(group) 33: withCallingHandlers(if (tangle) process_tangle(group) else process_group(group), error = function(e) { if (progress && is.function(pb$interrupt)) pb$interrupt() if (xfun::pkg_available("rlang", "1.0.0")) { if (is_R_CMD_build() || is_R_CMD_check()) { cnd = tryCatch(rlang::entrace(e), error = identity) error <<- format(cnd) } else { rlang::entrace(e) } } }) 34: xfun:::handle_error(withCallingHandlers(if (tangle) process_tangle(group) else process_group(group), error = function(e) { if (progress && is.function(pb$interrupt)) pb$interrupt() if (xfun::pkg_available("rlang", "1.0.0")) { if (is_R_CMD_build() || is_R_CMD_check()) { cnd = tryCatch(rlang::entrace(e), error = identity) error <<- format(cnd) } else { rlang::entrace(e) } } }), function(loc) { setwd(wd) write_utf8(res, output %n% stdout()) paste0("\nQuitting from ", loc, if (!is.null(error)) paste0("\n", rule(), error, "\n", rule()))}, if (labels[i] != "") sprintf(" [%s]", labels[i]), get_loc) 35: process_file(text, output) 36: knitr::knit(knit_input, knit_output, envir = envir, quiet = quiet) 37: rmarkdown::render(file, encoding = encoding, quiet = quiet, envir = globalenv(), output_dir = getwd(), ...) 38: vweave_rmarkdown(...) 39: engine$weave(file, quiet = quiet, encoding = enc) 40: doTryCatch(return(expr), name, parentenv, handler) 41: tryCatchOne(expr, names, parentenv, handlers[[1L]]) 42: tryCatchList(expr, classes, parentenv, handlers) 43: tryCatch({ engine$weave(file, quiet = quiet, encoding = enc) setwd(startdir) output <- find_vignette_product(name, by = "weave", engine = engine) if (!have.makefile && vignette_is_tex(output)) { texi2pdf(file = output, clean = FALSE, quiet = quiet) output <- find_vignette_product(name, by = "texi2pdf", engine = engine) }}, error = function(e) { OK <<- FALSE message(gettextf("Error: processing vignette '%s' failed with diagnostics:\n%s", file, conditionMessage(e)))}) 44: tools:::.buildOneVignette("report_table.Rmd", "/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/report.Rcheck/vign_test/report", TRUE, FALSE, "report_table", "UTF-8", "/home/hornik/tmp/scratch/Rtmp9dBoP8/file39915f647263b7.rds") An irrecoverable exception occurred. R is aborting now ... Segmentation fault SUMMARY: processing the following files failed:   ‘report.Rmd’ ‘report_table.Rmd’ Error: Vignette re-building failed. Execution halted
• checking PDF version of manual ... [7s/9s] OK
• checking HTML version of manual ... [5s/8s] OK
• checking for non-standard things in the check directory ... OK
• DONE

Status: 2 ERRORs