* installing to library ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages’
* installing *source* package ‘regmed’ ...
** this is package ‘regmed’ version ‘2.1.5’
** package ‘regmed’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘Debian clang version 19.1.7 (3+b2)’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpEZq9EW/R.INSTALL239e103c2b2cff/regmed/src'
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c RcppExports.cpp -o RcppExports.o
In file included from RcppExports.cpp:4:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo.h:29:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/version/arma.h:71:17: warning: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT. See GitHub issue #475 for more. [-W#pragma-messages]
71 | #pragma message("Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT. See GitHub issue #475 for more.")
| ^
1 warning generated.
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c mvregmed.cpp -o mvregmed.o
In file included from mvregmed.cpp:1:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo.h:29:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/version/arma.h:71:17: warning: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT. See GitHub issue #475 for more. [-W#pragma-messages]
71 | #pragma message("Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT. See GitHub issue #475 for more.")
| ^
mvregmed.cpp:127:9: warning: unused variable 'ncolA' [-Wunused-variable]
127 | int ncolA = A.n_cols;
| ^~~~~
mvregmed.cpp:129:9: warning: unused variable 'nrowB' [-Wunused-variable]
129 | int nrowB = B.n_rows;
| ^~~~~
mvregmed.cpp:532:7: warning: variable 'rank' set but not used [-Wunused-but-set-variable]
532 | int rank;
| ^
mvregmed.cpp:696:10: warning: unused variable 'pen_loss_end' [-Wunused-variable]
696 | double pen_loss_end = 0.0;
| ^~~~~~~~~~~~
mvregmed.cpp:723:7: warning: unused variable 'nt' [-Wunused-variable]
723 | int nt = vary.n_rows;
| ^~
6 warnings generated.
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c regmed.cpp -o regmed.o
In file included from regmed.cpp:1:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo.h:29:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/version/arma.h:71:17: warning: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT. See GitHub issue #475 for more. [-W#pragma-messages]
71 | #pragma message("Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT. See GitHub issue #475 for more.")
| ^
regmed.cpp:501:10: warning: unused variable 'varx_old' [-Wunused-variable]
501 | double varx_old = 0.0;
| ^~~~~~~~
regmed.cpp:502:10: warning: unused variable 'varx_new' [-Wunused-variable]
502 | double varx_new = 0.0;
| ^~~~~~~~
regmed.cpp:503:10: warning: unused variable 'varx_diff' [-Wunused-variable]
503 | double varx_diff = 0.0;
| ^~~~~~~~~
regmed.cpp:507:10: warning: unused variable 'vary_diff' [-Wunused-variable]
507 | double vary_diff = 0.0;
| ^~~~~~~~~
regmed.cpp:514:10: warning: unused variable 'pen_loss_end' [-Wunused-variable]
514 | double pen_loss_end = 0.0;
| ^~~~~~~~~~~~
regmed.cpp:526:10: warning: unused variable 'grad_varx' [-Wunused-variable]
526 | double grad_varx = 0.0;
| ^~~~~~~~~
7 warnings generated.
clang++-19 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -Wl,-O1 -o regmed.so RcppExports.o mvregmed.o regmed.o -fopenmp -llapack -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lRblas -L/usr/lib/llvm-19/lib -lFortranRuntime -lFortranDecimal -lm -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpEZq9EW/R.INSTALL239e103c2b2cff/regmed/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpEZq9EW/R.INSTALL239e103c2b2cff/regmed/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpEZq9EW/R.INSTALL239e103c2b2cff/regmed/src'
installing to /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/00LOCK-regmed/00new/regmed/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (regmed)