* installing to library ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages’
* installing *source* package ‘rJava’ ...
** package ‘rJava’ successfully unpacked and MD5 sums checked
** using staged installation
checking for gcc... clang-15
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether clang-15 accepts -g... yes
checking for clang-15 option to accept ISO C89... none needed
checking how to run the C preprocessor... clang-15 -E
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for ANSI C header files... yes
checking for sys/wait.h that is POSIX.1 compatible... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for string.h... (cached) yes
checking sys/time.h usability... yes
checking sys/time.h presence... yes
checking for sys/time.h... yes
checking for unistd.h... (cached) yes
checking for an ANSI C-conforming const... yes
checking whether time.h and sys/time.h may both be included... yes
configure: checking whether clang-15 supports static inline...
yes
checking whether setjmp.h is POSIX.1 compatible... yes
checking whether sigsetjmp is declared... yes
checking whether siglongjmp is declared... yes
checking Java support in R... present:
interpreter : '/usr/bin/java'
archiver : '/usr/bin/jar'
compiler : '/usr/bin/javac'
header prep.: ''
cpp flags : '-I/usr/lib/jvm/java-17-openjdk-amd64/include -I/usr/lib/jvm/java-17-openjdk-amd64/include/linux'
java libs : '-L/usr/lib/jvm/java-17-openjdk-amd64/lib/server -ljvm'
checking whether Java run-time works... yes
checking whether -Xrs is supported... yes
checking whether -Xrs will be used... yes
checking whether JVM will be loaded dynamically... no
checking whether JNI programs can be compiled... yes
checking whether JNI programs run... yes
checking JNI data types... ok
checking whether JRI should be compiled (autodetect)... yes
checking whether debugging output should be enabled... no
checking whether memory profiling is desired... no
checking whether threads support is requested... no
checking whether callbacks support is requested... no
checking whether JNI cache support is requested... no
checking whether headless init is enabled... no
checking whether JRI is requested... yes
configure: creating ./config.status
config.status: creating src/Makevars
config.status: creating R/zzz.R
config.status: creating src/config.h
=== configuring in jri (/tmp/Rtmpwp1jl8/R.INSTALL23125e74645bb9/rJava/jri)
configure: running /bin/bash ./configure --disable-option-checking '--prefix=/usr/local' 'CC=clang-15' 'CFLAGS=-g -O3 -Wall -pedantic' 'LDFLAGS=-Wl,-O1' 'CPPFLAGS=-I/usr/local/include' --cache-file=/dev/null --srcdir=.
checking build system type... x86_64-pc-linux-gnu
checking host system type... x86_64-pc-linux-gnu
checking for gcc... clang-15
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether the compiler supports GNU C... yes
checking whether clang-15 accepts -g... yes
checking for clang-15 option to enable C11 features... none needed
checking for stdio.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for strings.h... yes
checking for sys/stat.h... yes
checking for sys/types.h... yes
checking for unistd.h... yes
checking for sys/time.h... yes
checking for sys/types.h... (cached) yes
checking for sys/select.h... yes
checking Java version... 17.0.6
checking Java compatibility version (integer)... 17
checking whether actually works... no
checking whether javah was replaced by javac -h... yes
checking for target flags... -h . -target 1.8 -source 1.8
checking whether Java interpreter works... checking whether JNI programs can be compiled... yes
checking whether JNI programs can be run... yes
checking JNI data types... ok
checking whether Rinterface.h exports R_CStackXXX variables... yes
checking whether Rinterface.h exports R_SignalHandlers... yes
configure: creating ./config.status
config.status: creating src/Makefile
config.status: creating Makefile
config.status: creating run
config.status: creating src/config.h
** libs
using C compiler: ‘Debian clang version 15.0.6’
make[1]: Entering directory '/tmp/Rtmpwp1jl8/R.INSTALL23125e74645bb9/rJava/src'
clang-15 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I. -I/usr/lib/jvm/java-17-openjdk-amd64/include -I/usr/lib/jvm/java-17-openjdk-amd64/include/linux -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c Rglue.c -o Rglue.o
In file included from Rglue.c:2:
./rJava.h:123:23: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes]
HIDE JNIEnv* getJNIEnv();
^
void
./rJava.h:167:28: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes]
HIDE SEXP R_getUnboundValue() ;
^
void
Rglue.c:39:27: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes]
REPC SEXP RJava_has_jri_cb() {
^
void
Rglue.c:406:7: warning: variable 'i' set but not used [-Wunused-but-set-variable]
int i=0;
^
Rglue.c:1214:25: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes]
REPC SEXP RpollException() {
^
void
Rglue.c:1225:25: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes]
REP void RclearException() {
^
void
Rglue.c:1051:13: warning: unused function 'new_jrectRef' [-Wunused-function]
static SEXP new_jrectRef(JNIEnv *env, jobject a, const char *sig, SEXP dim ) {
^
7 warnings generated.
clang-15 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I. -I/usr/lib/jvm/java-17-openjdk-amd64/include -I/usr/lib/jvm/java-17-openjdk-amd64/include/linux -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c arrayc.c -o arrayc.o
In file included from arrayc.c:7:
./rJava.h:123:23: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes]
HIDE JNIEnv* getJNIEnv();
^
void
./rJava.h:167:28: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes]
HIDE SEXP R_getUnboundValue() ;
^
void
2 warnings generated.
clang-15 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I. -I/usr/lib/jvm/java-17-openjdk-amd64/include -I/usr/lib/jvm/java-17-openjdk-amd64/include/linux -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c callJNI.c -o callJNI.o
In file included from callJNI.c:3:
./rJava.h:123:23: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes]
HIDE JNIEnv* getJNIEnv();
^
void
./rJava.h:167:28: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes]
HIDE SEXP R_getUnboundValue() ;
^
void
2 warnings generated.
clang-15 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I. -I/usr/lib/jvm/java-17-openjdk-amd64/include -I/usr/lib/jvm/java-17-openjdk-amd64/include/linux -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c callback.c -o callback.o
In file included from callback.c:1:
./rJava.h:123:23: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes]
HIDE JNIEnv* getJNIEnv();
^
void
./rJava.h:167:28: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes]
HIDE SEXP R_getUnboundValue() ;
^
void
2 warnings generated.
clang-15 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I. -I/usr/lib/jvm/java-17-openjdk-amd64/include -I/usr/lib/jvm/java-17-openjdk-amd64/include/linux -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c fields.c -o fields.o
In file included from fields.c:7:
./rJava.h:123:23: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes]
HIDE JNIEnv* getJNIEnv();
^
void
./rJava.h:167:28: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes]
HIDE SEXP R_getUnboundValue() ;
^
void
fields.c:91:13: warning: unused variable 'c' [-Wunused-variable]
char *c = clnam;
^
fields.c:149:9: warning: unused variable 'clnam' [-Wunused-variable]
char *clnam = 0, *detsig = 0;
^
4 warnings generated.
clang-15 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I. -I/usr/lib/jvm/java-17-openjdk-amd64/include -I/usr/lib/jvm/java-17-openjdk-amd64/include/linux -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o
In file included from init.c:1:
./rJava.h:123:23: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes]
HIDE JNIEnv* getJNIEnv();
^
void
./rJava.h:167:28: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes]
HIDE SEXP R_getUnboundValue() ;
^
void
init.c:163:38: warning: assigning to 'void *' from 'int (FILE *, const char *, struct __va_list_tag *)' (aka 'int (struct _IO_FILE *, const char *, struct __va_list_tag *)') converts between void pointer and function pointer [-Wpedantic]
vm_options[propNum++].extraInfo = vfprintf_hook;
^ ~~~~~~~~~~~~~
init.c:167:38: warning: assigning to 'void *' from 'void (int)' converts between void pointer and function pointer [-Wpedantic]
vm_options[propNum++].extraInfo = exit_hook;
^ ~~~~~~~~~
init.c:751:17: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes]
REP void doneJVM() {
^
void
init.c:762:25: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes]
REPC SEXP initRJavaTools(){
^
void
6 warnings generated.
clang-15 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I. -I/usr/lib/jvm/java-17-openjdk-amd64/include -I/usr/lib/jvm/java-17-openjdk-amd64/include/linux -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c jri_glue.c -o jri_glue.o
In file included from jri_glue.c:3:
./rJava.h:123:23: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes]
HIDE JNIEnv* getJNIEnv();
^
void
./rJava.h:167:28: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes]
HIDE SEXP R_getUnboundValue() ;
^
void
2 warnings generated.
clang-15 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I. -I/usr/lib/jvm/java-17-openjdk-amd64/include -I/usr/lib/jvm/java-17-openjdk-amd64/include/linux -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c loader.c -o loader.o
In file included from loader.c:7:
./rJava.h:123:23: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes]
HIDE JNIEnv* getJNIEnv();
^
void
./rJava.h:167:28: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes]
HIDE SEXP R_getUnboundValue() ;
^
void
loader.c:34:37: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes]
REPC SEXP RJava_primary_class_loader() {
^
void
3 warnings generated.
clang-15 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I. -I/usr/lib/jvm/java-17-openjdk-amd64/include -I/usr/lib/jvm/java-17-openjdk-amd64/include/linux -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c otables.c -o otables.o
In file included from otables.c:1:
./rJava.h:123:23: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes]
HIDE JNIEnv* getJNIEnv();
^
void
./rJava.h:167:28: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes]
HIDE SEXP R_getUnboundValue() ;
^
void
otables.c:11:28: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes]
HIDE SEXP R_getUnboundValue() {
^
void
3 warnings generated.
clang-15 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I. -I/usr/lib/jvm/java-17-openjdk-amd64/include -I/usr/lib/jvm/java-17-openjdk-amd64/include/linux -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c rJava.c -o rJava.o
In file included from rJava.c:4:
./rJava.h:123:23: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes]
HIDE JNIEnv* getJNIEnv();
^
void
./rJava.h:167:28: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes]
HIDE SEXP R_getUnboundValue() ;
^
void
rJava.c:14:27: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes]
static SEXP getCurrentCall() {
^
void
rJava.c:142:23: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes]
HIDE JNIEnv *getJNIEnv()
^
void
4 warnings generated.
clang-15 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I. -I/usr/lib/jvm/java-17-openjdk-amd64/include -I/usr/lib/jvm/java-17-openjdk-amd64/include/linux -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c registration.c -o registration.o
registration.c:6:12: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes]
int dummy__() {
^
void
1 warning generated.
clang-15 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I. -I/usr/lib/jvm/java-17-openjdk-amd64/include -I/usr/lib/jvm/java-17-openjdk-amd64/include/linux -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c tools.c -o tools.o
In file included from tools.c:7:
./rJava.h:123:23: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes]
HIDE JNIEnv* getJNIEnv();
^
void
./rJava.h:167:28: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes]
HIDE SEXP R_getUnboundValue() ;
^
void
tools.c:109:28: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes]
REPC SEXP RgetNullReference() {
^
void
tools.c:131:25: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes]
REPC SEXP RJava_checkJVM() {
^
void
tools.c:141:27: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes]
REPC SEXP RJava_needs_init() {
^
void
5 warnings generated.
clang-15 -shared -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -Wl,-O1 -o rJava.so Rglue.o arrayc.o callJNI.o callback.o fields.o init.o jri_glue.o loader.o otables.o rJava.o registration.o tools.o -L/usr/lib/jvm/java-17-openjdk-amd64/lib/server -ljvm -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lR
(cd ../jri && make)
make[2]: Entering directory '/tmp/Rtmpwp1jl8/R.INSTALL23125e74645bb9/rJava/jri'
make -C src JRI.jar
make[3]: Entering directory '/tmp/Rtmpwp1jl8/R.INSTALL23125e74645bb9/rJava/jri/src'
/usr/bin/javac -h . -target 1.8 -source 1.8 -d . ../Mutex.java ../RBool.java ../RConsoleOutputStream.java ../REXP.java ../RFactor.java ../RList.java ../RMainLoopCallbacks.java ../RVector.java ../Rengine.java ../package-info.java
warning: [options] bootstrap class path not set in conjunction with -source 8
../RFactor.java:42: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
id.addElement(new Integer(i[j]-base));
^
../RFactor.java:56: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
id.addElement(new Integer(i));
^
Note: ../REXP.java uses or overrides a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
Note: Some input files use unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
3 warnings
if [ -n "" ]; then -d . -classpath . org.rosuda.JRI.Rengine; fi
clang-15 -c -o Rengine.o Rengine.c -g -Iinclude -DRIF_HAS_CSTACK -DRIF_HAS_RSIGHAND -DHAVE_CONFIG_H -g -O3 -Wall -pedantic -I/usr/lib/jvm/java-17-openjdk-amd64/include -I/usr/lib/jvm/java-17-openjdk-amd64/include/linux -fpic -I/usr/lib/jvm/java-17-openjdk-amd64/include -I/usr/lib/jvm/java-17-openjdk-amd64/include/linux -I/home/hornik/tmp/R.check/r-devel-clang/Work/build/include -I/home/hornik/tmp/R.check/r-devel-clang/Work/build/include
In file included from Rengine.c:6:
./rjava.h:13:23: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes]
int RJava_request_lock();
^
void
./rjava.h:14:21: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes]
int RJava_clear_lock();
^
void
./rjava.h:17:21: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes]
void RJava_init_ctrl();
^
void
In file included from Rengine.c:24:
./Rcallbacks.h:25:21: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes]
void Re_ResetConsole();
^
void
./Rcallbacks.h:26:21: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes]
void Re_FlushConsole();
^
void
./Rcallbacks.h:27:24: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes]
void Re_ClearerrConsole();
^
void
In file included from Rengine.c:25:
./Rinit.h:5:17: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes]
void initRinside();
^
void
7 warnings generated.
clang-15 -c -o jri.o jri.c -g -Iinclude -DRIF_HAS_CSTACK -DRIF_HAS_RSIGHAND -DHAVE_CONFIG_H -g -O3 -Wall -pedantic -I/usr/lib/jvm/java-17-openjdk-amd64/include -I/usr/lib/jvm/java-17-openjdk-amd64/include/linux -fpic -I/usr/lib/jvm/java-17-openjdk-amd64/include -I/usr/lib/jvm/java-17-openjdk-amd64/include/linux -I/home/hornik/tmp/R.check/r-devel-clang/Work/build/include -I/home/hornik/tmp/R.check/r-devel-clang/Work/build/include
clang-15 -c -o Rcallbacks.o Rcallbacks.c -g -Iinclude -DRIF_HAS_CSTACK -DRIF_HAS_RSIGHAND -DHAVE_CONFIG_H -g -O3 -Wall -pedantic -I/usr/lib/jvm/java-17-openjdk-amd64/include -I/usr/lib/jvm/java-17-openjdk-amd64/include/linux -fpic -I/usr/lib/jvm/java-17-openjdk-amd64/include -I/usr/lib/jvm/java-17-openjdk-amd64/include/linux -I/home/hornik/tmp/R.check/r-devel-clang/Work/build/include -I/home/hornik/tmp/R.check/r-devel-clang/Work/build/include
In file included from Rcallbacks.c:7:
./Rcallbacks.h:25:21: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes]
void Re_ResetConsole();
^
void
./Rcallbacks.h:26:21: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes]
void Re_FlushConsole();
^
void
./Rcallbacks.h:27:24: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes]
void Re_ClearerrConsole();
^
void
Rcallbacks.c:39:25: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes]
JNIEnv *checkEnvironment()
^
void
Rcallbacks.c:144:21: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes]
void Re_ResetConsole()
^
void
Rcallbacks.c:149:21: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes]
void Re_FlushConsole()
^
void
Rcallbacks.c:166:24: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes]
void Re_ClearerrConsole()
^
void
7 warnings generated.
clang-15 -c -o Rinit.o Rinit.c -g -Iinclude -DRIF_HAS_CSTACK -DRIF_HAS_RSIGHAND -DHAVE_CONFIG_H -g -O3 -Wall -pedantic -I/usr/lib/jvm/java-17-openjdk-amd64/include -I/usr/lib/jvm/java-17-openjdk-amd64/include/linux -fpic -I/home/hornik/tmp/R.check/r-devel-clang/Work/build/include -I/home/hornik/tmp/R.check/r-devel-clang/Work/build/include
In file included from Rinit.c:3:
./Rinit.h:5:17: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes]
void initRinside();
^
void
In file included from Rinit.c:4:
./Rcallbacks.h:25:21: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes]
void Re_ResetConsole();
^
void
./Rcallbacks.h:26:21: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes]
void Re_FlushConsole();
^
void
./Rcallbacks.h:27:24: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes]
void Re_ClearerrConsole();
^
void
Rinit.c:88:17: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes]
void initRinside() {
^
void
5 warnings generated.
clang-15 -c -o globals.o globals.c -g -Iinclude -DRIF_HAS_CSTACK -DRIF_HAS_RSIGHAND -DHAVE_CONFIG_H -g -O3 -Wall -pedantic -I/usr/lib/jvm/java-17-openjdk-amd64/include -I/usr/lib/jvm/java-17-openjdk-amd64/include/linux -fpic -I/usr/lib/jvm/java-17-openjdk-amd64/include -I/usr/lib/jvm/java-17-openjdk-amd64/include/linux
clang-15 -c -o rjava.o rjava.c -g -Iinclude -DRIF_HAS_CSTACK -DRIF_HAS_RSIGHAND -DHAVE_CONFIG_H -g -O3 -Wall -pedantic -I/usr/lib/jvm/java-17-openjdk-amd64/include -I/usr/lib/jvm/java-17-openjdk-amd64/include/linux -fpic -I/usr/lib/jvm/java-17-openjdk-amd64/include -I/usr/lib/jvm/java-17-openjdk-amd64/include/linux
In file included from rjava.c:1:
./rjava.h:13:23: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes]
int RJava_request_lock();
^
void
./rjava.h:14:21: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes]
int RJava_clear_lock();
^
void
./rjava.h:17:21: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes]
void RJava_init_ctrl();
^
void
rjava.c:16:23: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes]
int RJava_request_lock() {
^
void
rjava.c:27:21: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes]
int RJava_clear_lock() {
^
void
rjava.c:47:21: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes]
void RJava_init_ctrl() {
^
void
6 warnings generated.
clang-15 -o libjri.so Rengine.o jri.o Rcallbacks.o Rinit.o globals.o rjava.o -Wl,-O1 -shared -L/usr/lib/jvm/java-17-openjdk-amd64/lib/server -ljvm -Wl,--export-dynamic -fopenmp -Wl,-O1 -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lR -lpcre2-8 -llzma -lbz2 -lz -ltirpc -lrt -ldl -lm -licuuc -licui18n
/usr/bin/javac -h . -target 1.8 -source 1.8 -d . ../Mutex.java ../RBool.java ../RConsoleOutputStream.java ../REXP.java ../RFactor.java ../RList.java ../RMainLoopCallbacks.java ../RVector.java ../Rengine.java ../package-info.java
warning: [options] bootstrap class path not set in conjunction with -source 8
../RFactor.java:42: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
id.addElement(new Integer(i[j]-base));
^
../RFactor.java:56: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
id.addElement(new Integer(i));
^
Note: ../REXP.java uses or overrides a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
Note: Some input files use unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
3 warnings
/usr/bin/jar fc JRI.jar org libjri.so
make[3]: Leaving directory '/tmp/Rtmpwp1jl8/R.INSTALL23125e74645bb9/rJava/jri/src'
rm -f libjri.so
cp src/libjri.so libjri.so
/usr/bin/javac -h . -target 1.8 -source 1.8 -classpath src/JRI.jar -d examples examples/rtest.java
warning: [options] bootstrap class path not set in conjunction with -source 8
Note: examples/rtest.java uses or overrides a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
1 warning
/usr/bin/javac -h . -target 1.8 -source 1.8 -classpath src/JRI.jar -d examples examples/rtest2.java
warning: [options] bootstrap class path not set in conjunction with -source 8
Note: examples/rtest2.java uses or overrides a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
1 warning
make[2]: Leaving directory '/tmp/Rtmpwp1jl8/R.INSTALL23125e74645bb9/rJava/jri'
make[1]: Leaving directory '/tmp/Rtmpwp1jl8/R.INSTALL23125e74645bb9/rJava/src'
make[1]: Entering directory '/tmp/Rtmpwp1jl8/R.INSTALL23125e74645bb9/rJava/src'
make[1]: Leaving directory '/tmp/Rtmpwp1jl8/R.INSTALL23125e74645bb9/rJava/src'
installing via 'install.libs.R' to /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/00LOCK-rJava/00new/rJava
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (rJava)