• using R Under development (unstable) (2026-11-08 r90859)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     Debian clang version 23.1.5 (2)     Debian flang version 23.1.5 (2)
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-11-10 08:31:08 UTC
• checking for file ‘priorsense/DESCRIPTION’ ... OK
• this is package ‘priorsense’ version ‘1.4.0’
• package encoding: UTF-8
• checking CRAN incoming feasibility ... [3s/4s] OK
• checking package namespace information ... OK
• checking package dependencies ... INFO Packages suggested but not available for checking:   'cmdstanr', 'iwmm', 'R2jags'
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘priorsense’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [1s/1s] OK
• checking whether the package can be loaded with stated dependencies ... [1s/1s] OK
• checking whether the package can be unloaded cleanly ... [1s/1s] OK
• checking whether the namespace can be loaded with stated dependencies ... [1s/1s] OK
• checking whether the namespace can be unloaded cleanly ... [1s/1s] OK
• checking loading without being on the library search path ... [1s/1s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [14s/17s] OK
• checking Rd files ... [0s/1s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking R/sysdata.rda ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [6s/7s] OK Examples with CPU (user + system) or elapsed time > 5s                   user system elapsed powerscale-plots 4.076 0.097 5.087
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [24s/31s] OK   Running ‘testthat.R’ [23s/30s]
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [66s/68s] ERROR Error(s) in re-building vignettes:   ... --- re-building ‘getting_started.qmd’ using html  [31m processing file: getting_started.qmd  [39m [31moutput file: getting_started.knit.md  [39m [1mpandoc [22m   to: html   output-file: getting_started.html   standalone: true   embed-resources: true   wrap: none   default-image-extension: png   css:     - >-       /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/quarto/rmarkdown/template/quarto_vignette/resources/vignette.css     [1mmetadata [22m   document-css: false   lang: en   minimal: true   theme: none   title: Getting started with priorsense   vignette: |     %\VignetteIndexEntry{Getting started with priorsense} %\VignetteEngine{quarto::html} %\VignetteEncoding{UTF-8}    Output created: getting_started.html --- finished re-building ‘getting_started.qmd’ --- re-building ‘papers.qmd’ using html  [1mpandoc [22m   to: html   output-file: papers.html   standalone: true   embed-resources: true   wrap: none   default-image-extension: png   css:     - >-       /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/quarto/rmarkdown/template/quarto_vignette/resources/vignette.css     [1mmetadata [22m   document-css: false   lang: en   minimal: true   theme: none   title: Published papers using priorsense   vignette: |     %\VignetteIndexEntry{Published papers using priorsense} %\VignetteEngine{quarto::html} %\VignetteEncoding{UTF-8}   bibliography:     - papers.bib   csl: papers.csl   nocite: |     @*    Output created: papers.html --- finished re-building ‘papers.qmd’ --- re-building ‘priorsense_with_brms.qmd’ using html  [31m processing file: priorsense_with_brms.qmd  [39m [31moutput file: priorsense_with_brms.knit.md  [39m [1mpandoc [22m   to: html   output-file: priorsense_with_brms.html   standalone: true   embed-resources: true   wrap: none   default-image-extension: png   css:     - >-       /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/quarto/rmarkdown/template/quarto_vignette/resources/vignette.css     [1mmetadata [22m   document-css: false   lang: en   minimal: true   theme: none   title: Using priorsense with brms   vignette: |     %\VignetteIndexEntry{Using priorsense with brms} %\VignetteEngine{quarto::html} %\VignetteEncoding{UTF-8}    Output created: priorsense_with_brms.html --- finished re-building ‘priorsense_with_brms.qmd’ --- re-building ‘priorsense_with_jags.qmd’ using html  [31m processing file: priorsense_with_jags.qmd  [39m [31mError in `library()`: ! there is no package called 'R2jags' Backtrace:     ▆  1. └─base::library(R2jags)  [39m [31m Quitting from priorsense_with_jags.qmd:18-26 [unnamed-chunk-2] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `library()`: ! there is no package called 'R2jags' --- Backtrace:     ▆  1. └─base::library(R2jags) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Execution halted  [39m [33mWARN: Error encountered when rendering files [39m Error: processing vignette 'priorsense_with_jags.qmd' failed with diagnostics: ! Error running quarto CLI from R. Caused by error in `quarto_render()`: ✖ Error returned by quarto CLI.   -----------------------------         processing file: priorsense_with_jags.qmd    [31mError in `library()`: [39m   ! there is no package called 'R2jags'   Backtrace:   ▆   1. └─base::library(R2jags)      Quitting from priorsense_with_jags.qmd:18-26 [unnamed-chunk-2]   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   <error/rlang_error>   Error in `library()`:   ! there is no package called 'R2jags'   ---   Backtrace:   ▆   1. └─base::library(R2jags)   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~      Execution halted    [33mWARN: Error encountered when rendering files [39m    Caused by error in `processx::run()`: ! System command 'quarto' failed --- failed re-building ‘priorsense_with_jags.qmd’ --- re-building ‘priorsense_with_nimble.qmd’ using html  [31m processing file: priorsense_with_nimble.qmd  [39m [31moutput file: priorsense_with_nimble.knit.md  [39m [1mpandoc [22m   to: html   output-file: priorsense_with_nimble.html   standalone: true   embed-resources: true   wrap: none   default-image-extension: png   css:     - >-       /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/quarto/rmarkdown/template/quarto_vignette/resources/vignette.css     [1mmetadata [22m   document-css: false   lang: en   minimal: true   theme: none   title: Using priorsense with NIMBLE   vignette: |     %\VignetteIndexEntry{Using priorsense with NIMBLE} %\VignetteEngine{quarto::html} %\VignetteEncoding{UTF-8}    Output created: priorsense_with_nimble.html --- finished re-building ‘priorsense_with_nimble.qmd’ --- re-building ‘priorsense_with_stan.qmd’ using html  [31m processing file: priorsense_with_stan.qmd  [39m [31moutput file: priorsense_with_stan.knit.md  [39m [1mpandoc [22m   to: html   output-file: priorsense_with_stan.html   standalone: true   embed-resources: true   wrap: none   default-image-extension: png   css:     - >-       /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/quarto/rmarkdown/template/quarto_vignette/resources/vignette.css     [1mmetadata [22m   document-css: false   lang: en   minimal: true   theme: none   title: Using priorsense with Stan   vignette: |     %\VignetteIndexEntry{Using priorsense with Stan} %\VignetteEngine{quarto::html} %\VignetteEncoding{UTF-8}    Output created: priorsense_with_stan.html --- finished re-building ‘priorsense_with_stan.qmd’ SUMMARY: processing the following file failed:   ‘priorsense_with_jags.qmd’ Error: Vignette re-building failed. Execution halted
• checking PDF version of manual ... [5s/7s] OK
• checking HTML version of manual ... [1s/3s] OK
• checking for non-standard things in the check directory ... OK
• DONE

Status: 1 ERROR