Install log for 'poLCAParallel'

* installing to library ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages’
* installing *source* package ‘poLCAParallel’ ...
** this is package ‘poLCAParallel’ version ‘1.2.6’
** package ‘poLCAParallel’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
specified C++20
using C compiler: ‘Debian clang version 21.1.8 (3+b1)’
using C++ compiler: ‘Debian clang version 21.1.8 (3+b1)’
using C++20
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpMshHv9/R.INSTALL2628144d01314/poLCAParallel/src'
clang++-21 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -DARMA_WARN_LEVEL=1 -DUSE_RCPP -fpic  -g -O3 -Wall -pedantic   -c RcppExports.cpp -o RcppExports.o
clang++-21 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -DARMA_WARN_LEVEL=1 -DUSE_RCPP -fpic  -g -O3 -Wall -pedantic   -c blrt.cc -o blrt.o
clang++-21 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -DARMA_WARN_LEVEL=1 -DUSE_RCPP -fpic  -g -O3 -Wall -pedantic   -c blrt_rcpp.cc -o blrt_rcpp.o
clang++-21 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -DARMA_WARN_LEVEL=1 -DUSE_RCPP -fpic  -g -O3 -Wall -pedantic   -c em_algorithm.cc -o em_algorithm.o
clang++-21 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -DARMA_WARN_LEVEL=1 -DUSE_RCPP -fpic  -g -O3 -Wall -pedantic   -c em_algorithm_array.cc -o em_algorithm_array.o
clang++-21 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -DARMA_WARN_LEVEL=1 -DUSE_RCPP -fpic  -g -O3 -Wall -pedantic   -c em_algorithm_array_serial.cc -o em_algorithm_array_serial.o
clang++-21 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -DARMA_WARN_LEVEL=1 -DUSE_RCPP -fpic  -g -O3 -Wall -pedantic   -c em_algorithm_nan.cc -o em_algorithm_nan.o
clang++-21 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -DARMA_WARN_LEVEL=1 -DUSE_RCPP -fpic  -g -O3 -Wall -pedantic   -c em_algorithm_rcpp.cc -o em_algorithm_rcpp.o
In file included from em_algorithm_rcpp.cc:28:
./poLCA.c:84:13: warning: variable 'totalChoices' set but not used [-Wunused-but-set-variable]
   84 |   int i, j, totalChoices;
      |             ^
1 warning generated.
clang++-21 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -DARMA_WARN_LEVEL=1 -DUSE_RCPP -fpic  -g -O3 -Wall -pedantic   -c em_algorithm_regress.cc -o em_algorithm_regress.o
clang++-21 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -DARMA_WARN_LEVEL=1 -DUSE_RCPP -fpic  -g -O3 -Wall -pedantic   -c error_solver.cc -o error_solver.o
clang++-21 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -DARMA_WARN_LEVEL=1 -DUSE_RCPP -fpic  -g -O3 -Wall -pedantic   -c goodness_fit.cc -o goodness_fit.o
clang++-21 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -DARMA_WARN_LEVEL=1 -DUSE_RCPP -fpic  -g -O3 -Wall -pedantic   -c goodness_fit_rcpp.cc -o goodness_fit_rcpp.o
clang-21 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -c poLCA.c -o poLCA.o
poLCA.c:84:13: warning: variable 'totalChoices' set but not used [-Wunused-but-set-variable]
   84 |   int i, j, totalChoices;
      |             ^
1 warning generated.
clang++-21 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -DARMA_WARN_LEVEL=1 -DUSE_RCPP -fpic  -g -O3 -Wall -pedantic   -c polca_rcpp.cc -o polca_rcpp.o
clang++-21 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -DARMA_WARN_LEVEL=1 -DUSE_RCPP -fpic  -g -O3 -Wall -pedantic   -c regularised_error.cc -o regularised_error.o
clang++-21 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -DARMA_WARN_LEVEL=1 -DUSE_RCPP -fpic  -g -O3 -Wall -pedantic   -c smoother.cc -o smoother.o
clang++-21 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -DARMA_WARN_LEVEL=1 -DUSE_RCPP -fpic  -g -O3 -Wall -pedantic   -c standard_error.cc -o standard_error.o
clang++-21 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -DARMA_WARN_LEVEL=1 -DUSE_RCPP -fpic  -g -O3 -Wall -pedantic   -c standard_error_rcpp.cc -o standard_error_rcpp.o
clang++-21 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -DARMA_WARN_LEVEL=1 -DUSE_RCPP -fpic  -g -O3 -Wall -pedantic   -c standard_error_regress.cc -o standard_error_regress.o
clang++-21 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -DARMA_WARN_LEVEL=1 -DUSE_RCPP -fpic  -g -O3 -Wall -pedantic   -c util.cc -o util.o
clang++-21 -std=gnu++20 -shared -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -Wl,-O1 -o poLCAParallel.so RcppExports.o blrt.o blrt_rcpp.o em_algorithm.o em_algorithm_array.o em_algorithm_array_serial.o em_algorithm_nan.o em_algorithm_rcpp.o em_algorithm_regress.o error_solver.o goodness_fit.o goodness_fit_rcpp.o poLCA.o polca_rcpp.o regularised_error.o smoother.o standard_error.o standard_error_rcpp.o standard_error_regress.o util.o -llapack -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lRblas -L/usr/lib/llvm-21/lib/clang/21/lib/linux -L/usr/lib/llvm-21/lib -lflang_rt.runtime -lm -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpMshHv9/R.INSTALL2628144d01314/poLCAParallel/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpMshHv9/R.INSTALL2628144d01314/poLCAParallel/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpMshHv9/R.INSTALL2628144d01314/poLCAParallel/src'
installing to /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/00LOCK-poLCAParallel/00new/poLCAParallel/libs
** R
** data
** exec
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (poLCAParallel)