- using R Under development (unstable) (2024-10-09 r87215)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
Debian clang version 19.1.1 (1)
Debian flang-new version 19.1.1 (1)
- running under: Debian GNU/Linux trixie/sid
- using session charset: UTF-8
- checking for file ‘plink/DESCRIPTION’ ... OK
- this is package ‘plink’ version ‘1.5-1’
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking serialization versions ... OK
- checking whether package ‘plink’ can be installed ... OK
See the install log for details.
- checking package directory ... OK
- checking for future file timestamps ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [0s/1s] OK
- checking whether the package can be loaded with stated dependencies ... [0s/1s] OK
- checking whether the package can be unloaded cleanly ... [0s/1s] OK
- checking whether the namespace can be loaded with stated dependencies ... [0s/1s] OK
- checking whether the namespace can be unloaded cleanly ... [1s/1s] OK
- checking loading without being on the library search path ... [0s/1s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [32s/47s] OK
- checking Rd files ... [1s/1s] NOTE
checkRd: (-1) as.weight.Rd:56-60: Lost braces in \itemize; meant \describe ?
checkRd: (-1) as.weight.Rd:62-63: Lost braces in \itemize; meant \describe ?
checkRd: (-1) as.weight.Rd:65-66: Lost braces in \itemize; meant \describe ?
checkRd: (-1) as.weight.Rd:68-70: Lost braces in \itemize; meant \describe ?
checkRd: (-1) as.weight.Rd:72-73: Lost braces in \itemize; meant \describe ?
checkRd: (-1) as.weight.Rd:78-80: Lost braces in \itemize; meant \describe ?
checkRd: (-1) as.weight.Rd:82-83: Lost braces in \itemize; meant \describe ?
checkRd: (-1) as.weight.Rd:85-92: Lost braces in \itemize; meant \describe ?
checkRd: (-1) as.weight.Rd:94-96: Lost braces in \itemize; meant \describe ?
checkRd: (-1) as.weight.Rd:98-104: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:13-37: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:18: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:19: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:20: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:23: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:24: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:25: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:27: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:28: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:29: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:30: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:31: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:32: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:33: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:34: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:39-81: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:44: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:45-46: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:47: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:48: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:54: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:55: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:56: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:57: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:63: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:64: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:65-66: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:71-72: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:73-74: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:75-76: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:83: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:85-86: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:88-89: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:91-93: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:95-98: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plink-package.Rd:100: Lost braces in \itemize; meant \describe ?
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... [0s/0s] OK
- checking LazyData ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking sizes of PDF files under ‘inst/doc’ ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [18s/23s] OK
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [17s/22s] OK
- checking PDF version of manual ... [7s/10s] OK
- checking HTML version of manual ... [3s/5s] OK
- checking for non-standard things in the check directory ... OK
- DONE
Status: 1 NOTE