* using log directory ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/partDSA.Rcheck’ * using R Under development (unstable) (2025-07-13 r88407) * using platform: x86_64-pc-linux-gnu * R was compiled by Debian clang version 19.1.7 (3+b1) Debian flang-new version 19.1.7 (3+b1) * running under: Debian GNU/Linux 13 (trixie) * using session charset: UTF-8 * checking for file ‘partDSA/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘partDSA’ version ‘0.9.14’ * checking CRAN incoming feasibility ... [1s/1s] NOTE Maintainer: ‘Annette Molinaro ’ No Authors@R field in DESCRIPTION. Please add one, modifying Authors@R: c(person(given = "Annette", family = "Molinaro", role = c("aut", "cre"), email = "annette.molinaro@ucsf.edu"), person(given = "Adam", family = "Olshen", role = "aut", email = "olshena@biostat.ucsf.edu"), person(given = "Karen", family = "Lostritto", role = "aut", email = "karen.lostritto@yale.edu"), person(given = "Gregory", family = "Ryslik", role = "aut", email = "gregory.ryslik@yale.edu"), person(given = "Steve", family = "Weston", role = "aut", email = "stephen.weston@yale.com")) as necessary. Package CITATION file contains call(s) to old-style personList() or as.personList(). Please use c() on person objects instead. Package CITATION file contains call(s) to old-style citEntry(). Please use bibentry() instead. * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking serialization versions ... OK * checking whether package ‘partDSA’ can be installed ... OK See 'https://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-debian-clang/partDSA-00install.html' for details. * checking package directory ... OK * checking for future file timestamps ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [2s/2s] OK * checking whether the package can be loaded with stated dependencies ... [2s/3s] OK * checking whether the package can be unloaded cleanly ... [2s/2s] OK * checking whether the namespace can be loaded with stated dependencies ... [2s/2s] OK * checking whether the namespace can be unloaded cleanly ... [2s/3s] OK * checking loading without being on the library search path ... [2s/2s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [21s/25s] OK * checking Rd files ... [0s/0s] OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking sizes of PDF files under ‘inst/doc’ ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... [8s/10s] OK Examples with CPU (user + system) or elapsed time > 5s user system elapsed partDSA 6.035 0.047 7.239 * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [126s/162s] OK * checking PDF version of manual ... [4s/6s] OK * checking HTML version of manual ... [0s/1s] OK * checking for non-standard things in the check directory ... OK * DONE Status: 1 NOTE