• using R Under development (unstable) (2025-10-31 r88977)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     Debian clang version 19.1.7 (7)     Debian flang-new version 19.1.7 (7)
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8
• checking for file ‘parafac4microbiome/DESCRIPTION’ ... OK
• this is package ‘parafac4microbiome’ version ‘1.3.2’
• package encoding: UTF-8
• checking CRAN incoming feasibility ... [1s/2s] OK
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking serialization versions ... OK
• checking whether package ‘parafac4microbiome’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [1s/1s] OK
• checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
• checking whether the package can be unloaded cleanly ... [0s/0s] OK
• checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
• checking whether the namespace can be unloaded cleanly ... [1s/1s] OK
• checking loading without being on the library search path ... [1s/1s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [8s/12s] OK
• checking Rd files ... [1s/1s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [1s/2s] OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [50s/70s] OK Examples with CPU (user + system) or elapsed time > 5s                                  user system elapsed assessModelQuality 10.171 0.512 16.253 importPhyloseq 7.870 0.222 11.826 assessModelStability 6.988 0.117 9.859 importTreeSummarizedExperiment 5.911 0.204 8.642 plotModelTCCs 5.099 0.024 6.118 plotModelStability 4.918 0.043 6.336
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [134s/168s] OK   Running ‘testthat.R’ [134s/168s]
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [168s/217s] OK
• checking PDF version of manual ... [8s/11s] OK
• checking HTML version of manual ... [1s/2s] OK
• checking for non-standard things in the check directory ... OK
• DONE

Status: OK