• using R Under development (unstable) (2025-10-19 r88945)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     Debian clang version 19.1.7 (7)     Debian flang-new version 19.1.7 (7)
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8
• checking for file ‘pammtools/DESCRIPTION’ ... OK
• this is package ‘pammtools’ version ‘0.7.3’
• package encoding: UTF-8
• checking CRAN incoming feasibility ... [2s/3s] OK
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘pammtools’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [4s/5s] OK
• checking whether the package can be loaded with stated dependencies ... [4s/4s] OK
• checking whether the package can be unloaded cleanly ... [4s/5s] OK
• checking whether the namespace can be loaded with stated dependencies ... [4s/4s] OK
• checking whether the namespace can be unloaded cleanly ... [4s/6s] OK
• checking loading without being on the library search path ... [5s/6s] OK
• checking whether startup messages can be suppressed ... [4s/6s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [29s/37s] OK
• checking Rd files ... [1s/1s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [0s/0s] OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking R/sysdata.rda ... OK
• checking examples ... [27s/36s] OK Examples with CPU (user + system) or elapsed time > 5s           user system elapsed sim_pexp 3.775 0.059 5.043
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [45s/60s] OK   Running ‘testthat.R’ [45s/60s]
• checking PDF version of manual ... [9s/12s] OK
• checking HTML version of manual ... [4s/7s] NOTE Found the following HTML validation problems: add_cif.html:105:1 (add_cif.Rd:53): Warning: missing </ul> before </div> add_counterfactual_transitions.html:72:1 (add_counterfactual_transitions.Rd:26): Warning: missing </ul> before </div> add_tdc.html:67:1 (add_tdc.Rd:21): Warning: missing </ul> before </div> as.data.frame.crps.html:66:1 (as.data.frame.crps.Rd:23): Warning: missing </ul> before </div> calc_ci.html:49:1 (calc_ci.Rd:11): Warning: missing </ul> before </div> compute_cumu_diff.html:57:1 (compute_cumu_diff.Rd:15): Warning: missing </ul> before </div> cumulative_coefficient.html:81:1 (cumulative_coefficient.Rd:29): Warning: missing </ul> before </div> elra_matrix.html:59:1 (elra_matrix.Rd:23): Warning: missing </ul> before </div> formula_helpers.html:50:1 (formula_helpers.Rd:13): Warning: missing </ul> before </div> get_cumu_eff.html:79:1 (get_cumu_eff.Rd:32): Warning: missing </ul> before </div> get_cumu_hazard.html:102:1 (get_cumu_hazard.Rd:52): Warning: missing </ul> before </div> get_cumulative.html:61:1 (get_cumulative.Rd:20): Warning: missing </ul> before </div> get_event_types.html:66:1 (get_event_types.Rd:24): Warning: missing </ul> before </div> get_hazard.html:110:1 (get_hazard.Rd:58): Warning: missing </ul> before </div> get_ped_form.html:52:1 (get_ped_form.Rd:14): Warning: missing </ul> before </div> get_plotinfo.html:51:1 (get_plotinfo.Rd:12): Warning: missing </ul> before </div> get_surv_prob.html:92:1 (get_surv_prob.Rd:44): Warning: missing </ul> before </div> get_tdc_form.html:53:1 (get_tdc_form.Rd:15): Warning: missing </ul> before </div> get_tdc_vars.html:48:1 (get_tdc_vars.Rd:10): Warning: missing </ul> before </div> get_term.html:59:1 (get_term.Rd:17): Warning: missing </ul> before </div> gg_partial.html:103:1 (gg_partial.Rd:56): Warning: missing </ul> before </div> make_X.html:57:1 (make_X.Rd:19): Warning: missing </ul> before </div> make_X.scam.html:52:1 (make_X.scam.Rd:13): Warning: missing </ul> before </div> modus.html:46:1 (modus.Rd:10): Warning: missing </ul> before </div> nest_tdc.html:66:1 (nest_tdc.Rd:24): Warning: missing </ul> before </div> predictSurvProb.pamm.html:63:1 (predictSurvProb.pamm.Rd:20): Warning: missing </ul> before </div> prep_concurrent.html:54:1 (prep_concurrent.Rd:16): Warning: missing </ul> before </div> rpexp.html:58:1 (rpexp.Rd:16): Warning: missing </ul> before </div> smooth.construct.fdl.smooth.spec.html:60:1 (smooth.construct.fdl.smooth.spec.Rd:14): Warning: missing </ul> before </div> specials.html:94:1 (specials.Rd:44): Warning: missing </ul> before </div> tidiers.html:59:1 (tidiers.Rd:17): Warning: missing </ul> before </div> tidy_smooth2d.html:64:1 (tidy_smooth2d.Rd:22): Warning: missing </ul> before </div>
• checking for non-standard things in the check directory ... OK
• DONE

Status: 1 NOTE