- using R Under development (unstable) (2025-10-19 r88945)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
Debian clang version 19.1.7 (7)
Debian flang-new version 19.1.7 (7)
- running under: Debian GNU/Linux forky/sid
- using session charset: UTF-8
- checking for file ‘mdatools/DESCRIPTION’ ... OK
- this is package ‘mdatools’ version ‘0.14.2’
- package encoding: UTF-8
- checking CRAN incoming feasibility ... [4s/6s] OK
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘mdatools’ can be installed ... OK
See the install log for details.
- checking package directory ... OK
- checking for future file timestamps ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [2s/2s] OK
- checking whether the package can be loaded with stated dependencies ... [2s/2s] OK
- checking whether the package can be unloaded cleanly ... [2s/2s] OK
- checking whether the namespace can be loaded with stated dependencies ... [2s/2s] OK
- checking whether the namespace can be unloaded cleanly ... [2s/2s] OK
- checking loading without being on the library search path ... [2s/2s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [36s/42s] OK
- checking Rd files ... [2s/3s] OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... [0s/1s] OK
- checking data for ASCII and uncompressed saves ... OK
- checking examples ... [13s/18s] OK
- checking PDF version of manual ... [21s/26s] OK
- checking HTML version of manual ... [12s/23s] NOTE
Found the following HTML validation problems:
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classmodel.processRefValues.html:50:1 (classmodel.processRefValues.Rd:12): Warning: missing </ul> before </div>
confint.regcoeffs.html:68:1 (confint.regcoeffs.Rd:20): Warning: missing </ul> before </div>
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mdaplot.areColors.html:46:1 (mdaplot.areColors.Rd:10): Warning: missing </ul> before </div>
mdaplot.getXTickLabels.html:54:1 (mdaplot.getXTickLabels.Rd:14): Warning: missing </ul> before </div>
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mdaplot.getYTickLabels.html:54:1 (mdaplot.getYTickLabels.Rd:14): Warning: missing </ul> before </div>
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mdaplot.showColorbar.html:63:1 (mdaplot.showColorbar.Rd:21): Warning: missing </ul> before </div>
mdaplotg.processParam.html:58:1 (mdaplotg.processParam.Rd:16): Warning: missing </ul> before </div>
mdaplotg.showLegend.html:98:1 (mdaplotg.showLegend.Rd:42): Warning: missing </ul> before </div>
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plotCumVariance.ldecomp.html:63:1 (plotCumVariance.ldecomp.Rd:18): Warning: missing </ul> before </div>
plotCumVariance.mcr.html:74:1 (plotCumVariance.mcr.Rd:27): Warning: missing </ul> before </div>
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plotExtreme.pca.html:115:1 (plotExtreme.pca.Rd:51): Warning: missing </ul> before </div>
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plotPredictions.regmodel.html:79:1 (plotPredictions.regmodel.Rd:30): Warning: missing </ul> before </div>
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plotProbabilities.classres.html:80:1 (plotProbabilities.classres.Rd:30): Warning: missing </ul> before </div>
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plotSpectra.mcr.html:69:1 (plotSpectra.mcr.Rd:24): Warning: missing </ul> before </div>
plotVIPScores.html:50:1 (plotVIPScores.Rd:12): Warning: missing </ul> before </div>
plotVariance.ldecomp.html:84:1 (plotVariance.ldecomp.Rd:33): Warning: missing </ul> before </div>
plotVariance.mcr.html:74:1 (plotVariance.mcr.Rd:27): Warning: missing </ul> before </div>
plotXYResiduals.plsres.html:84:1 (plotXYResiduals.plsres.Rd:33): Warning: missing </ul> before </div>
plotYResiduals.regmodel.html:74:1 (plotYResiduals.regmodel.Rd:27): Warning: missing </ul> before </div>
plotseries.html:96:1 (plotseries.Rd:32): Warning: missing </ul> before </div>
pls.getZLimits.html:58:1 (pls.getZLimits.Rd:16): Warning: missing </ul> before </div>
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preparePlotData.html:51:1 (preparePlotData.Rd:10): Warning: missing </ul> before </div>
print.classres.html:56:1 (print.classres.Rd:14): Warning: missing </ul> before </div>
print.ipls.html:51:1 (print.ipls.Rd:12): Warning: missing </ul> before </div>
print.ldecomp.html:56:1 (print.ldecomp.Rd:14): Warning: missing </ul> before </div>
print.mcrals.html:51:1 (print.mcrals.Rd:12): Warning: missing </ul> before </div>
print.mcrpure.html:51:1 (print.mcrpure.Rd:12): Warning: missing </ul> before </div>
print.pca.html:51:1 (print.pca.Rd:12): Warning: missing </ul> before </div>
print.pcares.html:51:1 (print.pcares.Rd:12): Warning: missing </ul> before </div>
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regres.r2.html:50:1 (regres.r2.Rd:12): Warning: missing </ul> before </div>
regres.rmse.html:46:1 (regres.rmse.Rd:10): Warning: missing </ul> before </div>
regres.slope.html:50:1 (regres.slope.Rd:12): Warning: missing </ul> before </div>
regress.addattrs.html:54:1 (regress.addattrs.Rd:14): Warning: missing </ul> before </div>
repmat.html:54:1 (repmat.Rd:14): Warning: missing </ul> before </div>
selectCompNum.html:54:1 (selectCompNum.Rd:14): Warning: missing </ul> before </div>
setDistanceLimits.html:50:1 (setDistanceLimits.Rd:12): Warning: missing </ul> before </div>
showDistanceLimits.html:50:1 (showDistanceLimits.Rd:12): Warning: missing </ul> before </div>
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simcam.getPerformanceStats.html:50:1 (simcam.getPerformanceStats.Rd:12): Warning: missing </ul> before </div>
splitExcludedData.html:50:1 (splitExcludedData.Rd:12): Warning: missing </ul> before </div>
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summary.classres.html:65:1 (summary.classres.Rd:21): Warning: missing </ul> before </div>
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summary.mcrpure.html:51:1 (summary.mcrpure.Rd:12): Warning: missing </ul> before </div>
summary.pca.html:51:1 (summary.pca.Rd:12): Warning: missing </ul> before </div>
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summary.plsda.html:64:1 (summary.plsda.Rd:21): Warning: missing </ul> before </div>
summary.plsdares.html:55:1 (summary.plsdares.Rd:14): Warning: missing </ul> before </div>
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summary.regmodel.html:69:1 (summary.regmodel.Rd:24): Warning: missing </ul> before </div>
summary.regres.html:59:1 (summary.regres.Rd:16): Warning: missing </ul> before </div>
summary.simca.html:59:1 (summary.simca.Rd:16): Warning: missing </ul> before </div>
summary.simcam.html:55:1 (summary.simcam.Rd:14): Warning: missing </ul> before </div>
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summary.simcares.html:51:1 (summary.simcares.Rd:12): Warning: missing </ul> before </div>
- checking for non-standard things in the check directory ... OK
- DONE
Status: 1 NOTE