* installing to library ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages’
* installing *source* package ‘matrixCorr’ ...
** this is package ‘matrixCorr’ version ‘0.12.2’
** package ‘matrixCorr’ successfully unpacked and MD5 sums checked
** using staged installation
checking for required atomic ops support...
warning: could not compile atomic probe; falling back to default detection
clang on Linux detected; forcing atomic runtime
using atomic flags: -latomic
** libs
specified C++17
using C++ compiler: ‘Debian clang version 23.1.0 (2)’
using C++17
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpKmZTPl/R.INSTALL242e8c1b4fbf03/matrixCorr/src'
clang++-23 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_USE_CURRENT -fpic -g -O3 -Wall -pedantic -c RcppExports.cpp -o RcppExports.o
In file included from RcppExports.cpp:4:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo.h:29:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:51:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo:436:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:198:1: warning: unused function template 'arma_stop_runtime_error' [-Wunused-template]
198 | arma_stop_runtime_error(const T1& x)
| ^~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:241:1: warning: unused function template 'arma_print' [-Wunused-template]
241 | arma_print(const T1& x, const T2& y)
| ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:253:1: warning: unused function template 'arma_print' [-Wunused-template]
253 | arma_print(const T1& x, const T2& y, const T3& z)
| ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:335:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
335 | arma_plain_warn(const T1& arg1)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:346:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
346 | arma_plain_warn(const T1& arg1, const T2& arg2)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:357:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
357 | arma_plain_warn(const T1& arg1, const T2& arg2, const T3& arg3)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:368:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
368 | arma_plain_warn(const T1& arg1, const T2& arg2, const T3& arg3, const T4& arg4)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:545:1: warning: unused function template 'arma_incompat_size_string' [-Wunused-template]
545 | arma_incompat_size_string(const subview_cube<eT>& Q, const Mat<eT>& A, const char* x)
| ^~~~~~~~~~~~~~~~~~~~~~~~~
8 warnings generated.
clang++-23 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_USE_CURRENT -fpic -g -O3 -Wall -pedantic -c biweight_mid_corr.cpp -o biweight_mid_corr.o
In file included from biweight_mid_corr.cpp:5:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo.h:29:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:51:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo:436:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:253:1: warning: unused function template 'arma_print' [-Wunused-template]
253 | arma_print(const T1& x, const T2& y, const T3& z)
| ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:346:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
346 | arma_plain_warn(const T1& arg1, const T2& arg2)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:368:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
368 | arma_plain_warn(const T1& arg1, const T2& arg2, const T3& arg3, const T4& arg4)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:545:1: warning: unused function template 'arma_incompat_size_string' [-Wunused-template]
545 | arma_incompat_size_string(const subview_cube<eT>& Q, const Mat<eT>& A, const char* x)
| ^~~~~~~~~~~~~~~~~~~~~~~~~
4 warnings generated.
clang++-23 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_USE_CURRENT -fpic -g -O3 -Wall -pedantic -c bland_altman.cpp -o bland_altman.o
In file included from bland_altman.cpp:2:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo.h:29:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:51:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo:436:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:253:1: warning: unused function template 'arma_print' [-Wunused-template]
253 | arma_print(const T1& x, const T2& y, const T3& z)
| ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:346:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
346 | arma_plain_warn(const T1& arg1, const T2& arg2)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:368:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
368 | arma_plain_warn(const T1& arg1, const T2& arg2, const T3& arg3, const T4& arg4)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:545:1: warning: unused function template 'arma_incompat_size_string' [-Wunused-template]
545 | arma_incompat_size_string(const subview_cube<eT>& Q, const Mat<eT>& A, const char* x)
| ^~~~~~~~~~~~~~~~~~~~~~~~~
4 warnings generated.
clang++-23 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_USE_CURRENT -fpic -g -O3 -Wall -pedantic -c bland_altman_repeated.cpp -o bland_altman_repeated.o
In file included from bland_altman_repeated.cpp:4:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo.h:29:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:51:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo:436:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:253:1: warning: unused function template 'arma_print' [-Wunused-template]
253 | arma_print(const T1& x, const T2& y, const T3& z)
| ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:346:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
346 | arma_plain_warn(const T1& arg1, const T2& arg2)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:368:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
368 | arma_plain_warn(const T1& arg1, const T2& arg2, const T3& arg3, const T4& arg4)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:545:1: warning: unused function template 'arma_incompat_size_string' [-Wunused-template]
545 | arma_incompat_size_string(const subview_cube<eT>& Q, const Mat<eT>& A, const char* x)
| ^~~~~~~~~~~~~~~~~~~~~~~~~
4 warnings generated.
clang++-23 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_USE_CURRENT -fpic -g -O3 -Wall -pedantic -c ccc_glmm_poisson.cpp -o ccc_glmm_poisson.o
In file included from ccc_glmm_poisson.cpp:2:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo.h:29:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:51:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo:436:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:198:1: warning: unused function template 'arma_stop_runtime_error' [-Wunused-template]
198 | arma_stop_runtime_error(const T1& x)
| ^~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:241:1: warning: unused function template 'arma_print' [-Wunused-template]
241 | arma_print(const T1& x, const T2& y)
| ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:253:1: warning: unused function template 'arma_print' [-Wunused-template]
253 | arma_print(const T1& x, const T2& y, const T3& z)
| ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:335:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
335 | arma_plain_warn(const T1& arg1)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:346:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
346 | arma_plain_warn(const T1& arg1, const T2& arg2)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:357:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
357 | arma_plain_warn(const T1& arg1, const T2& arg2, const T3& arg3)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:368:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
368 | arma_plain_warn(const T1& arg1, const T2& arg2, const T3& arg3, const T4& arg4)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:545:1: warning: unused function template 'arma_incompat_size_string' [-Wunused-template]
545 | arma_incompat_size_string(const subview_cube<eT>& Q, const Mat<eT>& A, const char* x)
| ^~~~~~~~~~~~~~~~~~~~~~~~~
8 warnings generated.
clang++-23 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_USE_CURRENT -fpic -g -O3 -Wall -pedantic -c ccc_repeated.cpp -o ccc_repeated.o
In file included from ccc_repeated.cpp:2:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo.h:29:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:51:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo:436:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:241:1: warning: unused function template 'arma_print' [-Wunused-template]
241 | arma_print(const T1& x, const T2& y)
| ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:253:1: warning: unused function template 'arma_print' [-Wunused-template]
253 | arma_print(const T1& x, const T2& y, const T3& z)
| ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:346:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
346 | arma_plain_warn(const T1& arg1, const T2& arg2)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:357:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
357 | arma_plain_warn(const T1& arg1, const T2& arg2, const T3& arg3)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:368:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
368 | arma_plain_warn(const T1& arg1, const T2& arg2, const T3& arg3, const T4& arg4)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:545:1: warning: unused function template 'arma_incompat_size_string' [-Wunused-template]
545 | arma_incompat_size_string(const subview_cube<eT>& Q, const Mat<eT>& A, const char* x)
| ^~~~~~~~~~~~~~~~~~~~~~~~~
6 warnings generated.
clang++-23 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_USE_CURRENT -fpic -g -O3 -Wall -pedantic -c ccc_repeated_helper.cpp -o ccc_repeated_helper.o
In file included from ccc_repeated_helper.cpp:4:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo.h:29:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:51:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo:436:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:198:1: warning: unused function template 'arma_stop_runtime_error' [-Wunused-template]
198 | arma_stop_runtime_error(const T1& x)
| ^~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:241:1: warning: unused function template 'arma_print' [-Wunused-template]
241 | arma_print(const T1& x, const T2& y)
| ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:253:1: warning: unused function template 'arma_print' [-Wunused-template]
253 | arma_print(const T1& x, const T2& y, const T3& z)
| ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:335:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
335 | arma_plain_warn(const T1& arg1)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:346:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
346 | arma_plain_warn(const T1& arg1, const T2& arg2)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:357:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
357 | arma_plain_warn(const T1& arg1, const T2& arg2, const T3& arg3)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:368:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
368 | arma_plain_warn(const T1& arg1, const T2& arg2, const T3& arg3, const T4& arg4)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:545:1: warning: unused function template 'arma_incompat_size_string' [-Wunused-template]
545 | arma_incompat_size_string(const subview_cube<eT>& Q, const Mat<eT>& A, const char* x)
| ^~~~~~~~~~~~~~~~~~~~~~~~~
8 warnings generated.
clang++-23 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_USE_CURRENT -fpic -g -O3 -Wall -pedantic -c ccc_repeated_mixed_model.cpp -o ccc_repeated_mixed_model.o
In file included from ccc_repeated_mixed_model.cpp:3:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo.h:29:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:51:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo:436:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:253:1: warning: unused function template 'arma_print' [-Wunused-template]
253 | arma_print(const T1& x, const T2& y, const T3& z)
| ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:346:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
346 | arma_plain_warn(const T1& arg1, const T2& arg2)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:368:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
368 | arma_plain_warn(const T1& arg1, const T2& arg2, const T3& arg3, const T4& arg4)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:545:1: warning: unused function template 'arma_incompat_size_string' [-Wunused-template]
545 | arma_incompat_size_string(const subview_cube<eT>& Q, const Mat<eT>& A, const char* x)
| ^~~~~~~~~~~~~~~~~~~~~~~~~
4 warnings generated.
clang++-23 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_USE_CURRENT -fpic -g -O3 -Wall -pedantic -c chatterjee_xi.cpp -o chatterjee_xi.o
In file included from chatterjee_xi.cpp:2:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo.h:29:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:51:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo:436:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:198:1: warning: unused function template 'arma_stop_runtime_error' [-Wunused-template]
198 | arma_stop_runtime_error(const T1& x)
| ^~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:241:1: warning: unused function template 'arma_print' [-Wunused-template]
241 | arma_print(const T1& x, const T2& y)
| ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:253:1: warning: unused function template 'arma_print' [-Wunused-template]
253 | arma_print(const T1& x, const T2& y, const T3& z)
| ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:346:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
346 | arma_plain_warn(const T1& arg1, const T2& arg2)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:357:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
357 | arma_plain_warn(const T1& arg1, const T2& arg2, const T3& arg3)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:368:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
368 | arma_plain_warn(const T1& arg1, const T2& arg2, const T3& arg3, const T4& arg4)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:545:1: warning: unused function template 'arma_incompat_size_string' [-Wunused-template]
545 | arma_incompat_size_string(const subview_cube<eT>& Q, const Mat<eT>& A, const char* x)
| ^~~~~~~~~~~~~~~~~~~~~~~~~
7 warnings generated.
clang++-23 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_USE_CURRENT -fpic -g -O3 -Wall -pedantic -c cia.cpp -o cia.o
clang++-23 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_USE_CURRENT -fpic -g -O3 -Wall -pedantic -c cia_repeated.cpp -o cia_repeated.o
clang++-23 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_USE_CURRENT -fpic -g -O3 -Wall -pedantic -c cohen_kappa.cpp -o cohen_kappa.o
In file included from cohen_kappa.cpp:3:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo.h:29:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:51:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo:436:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:198:1: warning: unused function template 'arma_stop_runtime_error' [-Wunused-template]
198 | arma_stop_runtime_error(const T1& x)
| ^~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:241:1: warning: unused function template 'arma_print' [-Wunused-template]
241 | arma_print(const T1& x, const T2& y)
| ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:253:1: warning: unused function template 'arma_print' [-Wunused-template]
253 | arma_print(const T1& x, const T2& y, const T3& z)
| ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:335:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
335 | arma_plain_warn(const T1& arg1)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:346:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
346 | arma_plain_warn(const T1& arg1, const T2& arg2)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:357:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
357 | arma_plain_warn(const T1& arg1, const T2& arg2, const T3& arg3)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:368:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
368 | arma_plain_warn(const T1& arg1, const T2& arg2, const T3& arg3, const T4& arg4)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:545:1: warning: unused function template 'arma_incompat_size_string' [-Wunused-template]
545 | arma_incompat_size_string(const subview_cube<eT>& Q, const Mat<eT>& A, const char* x)
| ^~~~~~~~~~~~~~~~~~~~~~~~~
8 warnings generated.
clang++-23 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_USE_CURRENT -fpic -g -O3 -Wall -pedantic -c concordance_corr.cpp -o concordance_corr.o
In file included from concordance_corr.cpp:2:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo.h:29:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:51:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo:436:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:253:1: warning: unused function template 'arma_print' [-Wunused-template]
253 | arma_print(const T1& x, const T2& y, const T3& z)
| ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:346:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
346 | arma_plain_warn(const T1& arg1, const T2& arg2)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:368:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
368 | arma_plain_warn(const T1& arg1, const T2& arg2, const T3& arg3, const T4& arg4)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:545:1: warning: unused function template 'arma_incompat_size_string' [-Wunused-template]
545 | arma_incompat_size_string(const subview_cube<eT>& Q, const Mat<eT>& A, const char* x)
| ^~~~~~~~~~~~~~~~~~~~~~~~~
4 warnings generated.
clang++-23 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_USE_CURRENT -fpic -g -O3 -Wall -pedantic -c distance_correlation.cpp -o distance_correlation.o
In file included from distance_correlation.cpp:5:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo.h:29:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:51:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo:436:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:198:1: warning: unused function template 'arma_stop_runtime_error' [-Wunused-template]
198 | arma_stop_runtime_error(const T1& x)
| ^~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:241:1: warning: unused function template 'arma_print' [-Wunused-template]
241 | arma_print(const T1& x, const T2& y)
| ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:253:1: warning: unused function template 'arma_print' [-Wunused-template]
253 | arma_print(const T1& x, const T2& y, const T3& z)
| ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:335:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
335 | arma_plain_warn(const T1& arg1)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:346:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
346 | arma_plain_warn(const T1& arg1, const T2& arg2)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:357:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
357 | arma_plain_warn(const T1& arg1, const T2& arg2, const T3& arg3)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:368:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
368 | arma_plain_warn(const T1& arg1, const T2& arg2, const T3& arg3, const T4& arg4)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:545:1: warning: unused function template 'arma_incompat_size_string' [-Wunused-template]
545 | arma_incompat_size_string(const subview_cube<eT>& Q, const Mat<eT>& A, const char* x)
| ^~~~~~~~~~~~~~~~~~~~~~~~~
8 warnings generated.
clang++-23 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_USE_CURRENT -fpic -g -O3 -Wall -pedantic -c gwet_ac.cpp -o gwet_ac.o
In file included from gwet_ac.cpp:4:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo.h:29:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:51:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo:436:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:241:1: warning: unused function template 'arma_print' [-Wunused-template]
241 | arma_print(const T1& x, const T2& y)
| ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:253:1: warning: unused function template 'arma_print' [-Wunused-template]
253 | arma_print(const T1& x, const T2& y, const T3& z)
| ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:346:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
346 | arma_plain_warn(const T1& arg1, const T2& arg2)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:357:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
357 | arma_plain_warn(const T1& arg1, const T2& arg2, const T3& arg3)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:368:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
368 | arma_plain_warn(const T1& arg1, const T2& arg2, const T3& arg3, const T4& arg4)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:545:1: warning: unused function template 'arma_incompat_size_string' [-Wunused-template]
545 | arma_incompat_size_string(const subview_cube<eT>& Q, const Mat<eT>& A, const char* x)
| ^~~~~~~~~~~~~~~~~~~~~~~~~
6 warnings generated.
clang++-23 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_USE_CURRENT -fpic -g -O3 -Wall -pedantic -c hsic.cpp -o hsic.o
In file included from hsic.cpp:5:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo.h:29:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:51:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo:436:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:198:1: warning: unused function template 'arma_stop_runtime_error' [-Wunused-template]
198 | arma_stop_runtime_error(const T1& x)
| ^~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:241:1: warning: unused function template 'arma_print' [-Wunused-template]
241 | arma_print(const T1& x, const T2& y)
| ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:253:1: warning: unused function template 'arma_print' [-Wunused-template]
253 | arma_print(const T1& x, const T2& y, const T3& z)
| ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:346:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
346 | arma_plain_warn(const T1& arg1, const T2& arg2)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:357:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
357 | arma_plain_warn(const T1& arg1, const T2& arg2, const T3& arg3)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:368:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
368 | arma_plain_warn(const T1& arg1, const T2& arg2, const T3& arg3, const T4& arg4)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:545:1: warning: unused function template 'arma_incompat_size_string' [-Wunused-template]
545 | arma_incompat_size_string(const subview_cube<eT>& Q, const Mat<eT>& A, const char* x)
| ^~~~~~~~~~~~~~~~~~~~~~~~~
7 warnings generated.
clang++-23 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_USE_CURRENT -fpic -g -O3 -Wall -pedantic -c icc.cpp -o icc.o
In file included from icc.cpp:4:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo.h:29:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:51:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo:436:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:241:1: warning: unused function template 'arma_print' [-Wunused-template]
241 | arma_print(const T1& x, const T2& y)
| ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:253:1: warning: unused function template 'arma_print' [-Wunused-template]
253 | arma_print(const T1& x, const T2& y, const T3& z)
| ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:346:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
346 | arma_plain_warn(const T1& arg1, const T2& arg2)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:357:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
357 | arma_plain_warn(const T1& arg1, const T2& arg2, const T3& arg3)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:368:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
368 | arma_plain_warn(const T1& arg1, const T2& arg2, const T3& arg3, const T4& arg4)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:545:1: warning: unused function template 'arma_incompat_size_string' [-Wunused-template]
545 | arma_incompat_size_string(const subview_cube<eT>& Q, const Mat<eT>& A, const char* x)
| ^~~~~~~~~~~~~~~~~~~~~~~~~
icc.cpp:193:13: warning: unused function 'icc_pair_complete_core' [-Wunused-function]
193 | inline bool icc_pair_complete_core(const double* x,
| ^~~~~~~~~~~~~~~~~~~~~~
7 warnings generated.
clang++-23 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_USE_CURRENT -fpic -g -O3 -Wall -pedantic -c kendall_corr.cpp -o kendall_corr.o
In file included from kendall_corr.cpp:3:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo.h:29:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:51:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo:436:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:253:1: warning: unused function template 'arma_print' [-Wunused-template]
253 | arma_print(const T1& x, const T2& y, const T3& z)
| ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:346:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
346 | arma_plain_warn(const T1& arg1, const T2& arg2)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:368:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
368 | arma_plain_warn(const T1& arg1, const T2& arg2, const T3& arg3, const T4& arg4)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:545:1: warning: unused function template 'arma_incompat_size_string' [-Wunused-template]
545 | arma_incompat_size_string(const subview_cube<eT>& Q, const Mat<eT>& A, const char* x)
| ^~~~~~~~~~~~~~~~~~~~~~~~~
4 warnings generated.
clang++-23 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_USE_CURRENT -fpic -g -O3 -Wall -pedantic -c krippendorff_alpha.cpp -o krippendorff_alpha.o
In file included from krippendorff_alpha.cpp:1:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo.h:29:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:51:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo:436:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:198:1: warning: unused function template 'arma_stop_runtime_error' [-Wunused-template]
198 | arma_stop_runtime_error(const T1& x)
| ^~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:241:1: warning: unused function template 'arma_print' [-Wunused-template]
241 | arma_print(const T1& x, const T2& y)
| ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:253:1: warning: unused function template 'arma_print' [-Wunused-template]
253 | arma_print(const T1& x, const T2& y, const T3& z)
| ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:335:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
335 | arma_plain_warn(const T1& arg1)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:346:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
346 | arma_plain_warn(const T1& arg1, const T2& arg2)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:357:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
357 | arma_plain_warn(const T1& arg1, const T2& arg2, const T3& arg3)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:368:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
368 | arma_plain_warn(const T1& arg1, const T2& arg2, const T3& arg3, const T4& arg4)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:545:1: warning: unused function template 'arma_incompat_size_string' [-Wunused-template]
545 | arma_incompat_size_string(const subview_cube<eT>& Q, const Mat<eT>& A, const char* x)
| ^~~~~~~~~~~~~~~~~~~~~~~~~
8 warnings generated.
clang++-23 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_USE_CURRENT -fpic -g -O3 -Wall -pedantic -c multirater_kappa.cpp -o multirater_kappa.o
In file included from multirater_kappa.cpp:1:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo.h:29:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:51:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo:436:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:198:1: warning: unused function template 'arma_stop_runtime_error' [-Wunused-template]
198 | arma_stop_runtime_error(const T1& x)
| ^~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:241:1: warning: unused function template 'arma_print' [-Wunused-template]
241 | arma_print(const T1& x, const T2& y)
| ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:253:1: warning: unused function template 'arma_print' [-Wunused-template]
253 | arma_print(const T1& x, const T2& y, const T3& z)
| ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:335:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
335 | arma_plain_warn(const T1& arg1)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:346:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
346 | arma_plain_warn(const T1& arg1, const T2& arg2)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:357:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
357 | arma_plain_warn(const T1& arg1, const T2& arg2, const T3& arg3)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:368:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
368 | arma_plain_warn(const T1& arg1, const T2& arg2, const T3& arg3, const T4& arg4)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:545:1: warning: unused function template 'arma_incompat_size_string' [-Wunused-template]
545 | arma_incompat_size_string(const subview_cube<eT>& Q, const Mat<eT>& A, const char* x)
| ^~~~~~~~~~~~~~~~~~~~~~~~~
8 warnings generated.
clang++-23 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_USE_CURRENT -fpic -g -O3 -Wall -pedantic -c partial_correlation.cpp -o partial_correlation.o
In file included from partial_correlation.cpp:4:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo.h:29:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:51:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo:436:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:253:1: warning: unused function template 'arma_print' [-Wunused-template]
253 | arma_print(const T1& x, const T2& y, const T3& z)
| ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:346:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
346 | arma_plain_warn(const T1& arg1, const T2& arg2)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:368:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
368 | arma_plain_warn(const T1& arg1, const T2& arg2, const T3& arg3, const T4& arg4)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:545:1: warning: unused function template 'arma_incompat_size_string' [-Wunused-template]
545 | arma_incompat_size_string(const subview_cube<eT>& Q, const Mat<eT>& A, const char* x)
| ^~~~~~~~~~~~~~~~~~~~~~~~~
4 warnings generated.
clang++-23 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_USE_CURRENT -fpic -g -O3 -Wall -pedantic -c pearson.cpp -o pearson.o
In file included from pearson.cpp:3:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo.h:29:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:51:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo:436:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:241:1: warning: unused function template 'arma_print' [-Wunused-template]
241 | arma_print(const T1& x, const T2& y)
| ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:253:1: warning: unused function template 'arma_print' [-Wunused-template]
253 | arma_print(const T1& x, const T2& y, const T3& z)
| ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:346:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
346 | arma_plain_warn(const T1& arg1, const T2& arg2)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:357:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
357 | arma_plain_warn(const T1& arg1, const T2& arg2, const T3& arg3)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:368:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
368 | arma_plain_warn(const T1& arg1, const T2& arg2, const T3& arg3, const T4& arg4)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:545:1: warning: unused function template 'arma_incompat_size_string' [-Wunused-template]
545 | arma_incompat_size_string(const subview_cube<eT>& Q, const Mat<eT>& A, const char* x)
| ^~~~~~~~~~~~~~~~~~~~~~~~~
6 warnings generated.
clang++-23 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_USE_CURRENT -fpic -g -O3 -Wall -pedantic -c prob_agree.cpp -o prob_agree.o
In file included from prob_agree.cpp:2:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo.h:29:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:51:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo:436:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:253:1: warning: unused function template 'arma_print' [-Wunused-template]
253 | arma_print(const T1& x, const T2& y, const T3& z)
| ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:346:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
346 | arma_plain_warn(const T1& arg1, const T2& arg2)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:368:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
368 | arma_plain_warn(const T1& arg1, const T2& arg2, const T3& arg3, const T4& arg4)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:545:1: warning: unused function template 'arma_incompat_size_string' [-Wunused-template]
545 | arma_incompat_size_string(const subview_cube<eT>& Q, const Mat<eT>& A, const char* x)
| ^~~~~~~~~~~~~~~~~~~~~~~~~
4 warnings generated.
clang++-23 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_USE_CURRENT -fpic -g -O3 -Wall -pedantic -c rmcorr.cpp -o rmcorr.o
rmcorr.cpp:422:10: warning: variable 'syy' set but not used [-Wunused-but-set-variable]
422 | double syy = 0.0;
| ^
In file included from rmcorr.cpp:5:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo.h:29:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:51:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo:436:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:198:1: warning: unused function template 'arma_stop_runtime_error' [-Wunused-template]
198 | arma_stop_runtime_error(const T1& x)
| ^~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:241:1: warning: unused function template 'arma_print' [-Wunused-template]
241 | arma_print(const T1& x, const T2& y)
| ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:253:1: warning: unused function template 'arma_print' [-Wunused-template]
253 | arma_print(const T1& x, const T2& y, const T3& z)
| ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:335:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
335 | arma_plain_warn(const T1& arg1)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:346:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
346 | arma_plain_warn(const T1& arg1, const T2& arg2)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:357:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
357 | arma_plain_warn(const T1& arg1, const T2& arg2, const T3& arg3)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:368:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
368 | arma_plain_warn(const T1& arg1, const T2& arg2, const T3& arg3, const T4& arg4)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:545:1: warning: unused function template 'arma_incompat_size_string' [-Wunused-template]
545 | arma_incompat_size_string(const subview_cube<eT>& Q, const Mat<eT>& A, const char* x)
| ^~~~~~~~~~~~~~~~~~~~~~~~~
9 warnings generated.
clang++-23 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_USE_CURRENT -fpic -g -O3 -Wall -pedantic -c robust_correlations.cpp -o robust_correlations.o
In file included from robust_correlations.cpp:5:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo.h:29:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:51:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo:436:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:253:1: warning: unused function template 'arma_print' [-Wunused-template]
253 | arma_print(const T1& x, const T2& y, const T3& z)
| ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:346:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
346 | arma_plain_warn(const T1& arg1, const T2& arg2)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:368:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
368 | arma_plain_warn(const T1& arg1, const T2& arg2, const T3& arg3, const T4& arg4)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:545:1: warning: unused function template 'arma_incompat_size_string' [-Wunused-template]
545 | arma_incompat_size_string(const subview_cube<eT>& Q, const Mat<eT>& A, const char* x)
| ^~~~~~~~~~~~~~~~~~~~~~~~~
robust_correlations.cpp:31:15: warning: unused function 'median_sorted_std' [-Wunused-function]
31 | inline double median_sorted_std(const std::vector<double>& xs) {
| ^~~~~~~~~~~~~~~~~
robust_correlations.cpp:70:15: warning: unused function 'idealf_iqr' [-Wunused-function]
70 | inline double idealf_iqr(const arma::vec& x) {
| ^~~~~~~~~~
robust_correlations.cpp:86:15: warning: unused function 'idealf_iqr_sorted_std' [-Wunused-function]
86 | inline double idealf_iqr_sorted_std(const std::vector<double>& y) {
| ^~~~~~~~~~~~~~~~~~~~~
7 warnings generated.
clang++-23 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_USE_CURRENT -fpic -g -O3 -Wall -pedantic -c schafer_strimmer_shrinkage_correlation.cpp -o schafer_strimmer_shrinkage_correlation.o
In file included from schafer_strimmer_shrinkage_correlation.cpp:4:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo.h:29:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:51:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo:436:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:253:1: warning: unused function template 'arma_print' [-Wunused-template]
253 | arma_print(const T1& x, const T2& y, const T3& z)
| ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:346:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
346 | arma_plain_warn(const T1& arg1, const T2& arg2)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:368:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
368 | arma_plain_warn(const T1& arg1, const T2& arg2, const T3& arg3, const T4& arg4)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:545:1: warning: unused function template 'arma_incompat_size_string' [-Wunused-template]
545 | arma_incompat_size_string(const subview_cube<eT>& Q, const Mat<eT>& A, const char* x)
| ^~~~~~~~~~~~~~~~~~~~~~~~~
4 warnings generated.
clang++-23 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_USE_CURRENT -fpic -g -O3 -Wall -pedantic -c spearman.cpp -o spearman.o
In file included from spearman.cpp:2:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo.h:29:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:51:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo:436:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:253:1: warning: unused function template 'arma_print' [-Wunused-template]
253 | arma_print(const T1& x, const T2& y, const T3& z)
| ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:346:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
346 | arma_plain_warn(const T1& arg1, const T2& arg2)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:368:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
368 | arma_plain_warn(const T1& arg1, const T2& arg2, const T3& arg3, const T4& arg4)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:545:1: warning: unused function template 'arma_incompat_size_string' [-Wunused-template]
545 | arma_incompat_size_string(const subview_cube<eT>& Q, const Mat<eT>& A, const char* x)
| ^~~~~~~~~~~~~~~~~~~~~~~~~
spearman.cpp:58:15: warning: unused function 'spearman_pair_core' [-Wunused-function]
58 | inline double spearman_pair_core(const arma::vec& x, const arma::vec& y) {
| ^~~~~~~~~~~~~~~~~~
5 warnings generated.
clang++-23 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_USE_CURRENT -fpic -g -O3 -Wall -pedantic -c tetrachoric.cpp -o tetrachoric.o
In file included from tetrachoric.cpp:4:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo.h:29:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:51:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo:436:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:253:1: warning: unused function template 'arma_print' [-Wunused-template]
253 | arma_print(const T1& x, const T2& y, const T3& z)
| ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:346:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
346 | arma_plain_warn(const T1& arg1, const T2& arg2)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:368:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
368 | arma_plain_warn(const T1& arg1, const T2& arg2, const T3& arg3, const T4& arg4)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:545:1: warning: unused function template 'arma_incompat_size_string' [-Wunused-template]
545 | arma_incompat_size_string(const subview_cube<eT>& Q, const Mat<eT>& A, const char* x)
| ^~~~~~~~~~~~~~~~~~~~~~~~~
4 warnings generated.
clang++-23 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_USE_CURRENT -fpic -g -O3 -Wall -pedantic -c validate_corr_input.cpp -o validate_corr_input.o
clang++-23 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_USE_CURRENT -fpic -g -O3 -Wall -pedantic -c weighted_kappa.cpp -o weighted_kappa.o
In file included from weighted_kappa.cpp:1:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo.h:29:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:51:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo:436:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:198:1: warning: unused function template 'arma_stop_runtime_error' [-Wunused-template]
198 | arma_stop_runtime_error(const T1& x)
| ^~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:241:1: warning: unused function template 'arma_print' [-Wunused-template]
241 | arma_print(const T1& x, const T2& y)
| ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:253:1: warning: unused function template 'arma_print' [-Wunused-template]
253 | arma_print(const T1& x, const T2& y, const T3& z)
| ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:335:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
335 | arma_plain_warn(const T1& arg1)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:346:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
346 | arma_plain_warn(const T1& arg1, const T2& arg2)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:357:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
357 | arma_plain_warn(const T1& arg1, const T2& arg2, const T3& arg3)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:368:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
368 | arma_plain_warn(const T1& arg1, const T2& arg2, const T3& arg3, const T4& arg4)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:545:1: warning: unused function template 'arma_incompat_size_string' [-Wunused-template]
545 | arma_incompat_size_string(const subview_cube<eT>& Q, const Mat<eT>& A, const char* x)
| ^~~~~~~~~~~~~~~~~~~~~~~~~
8 warnings generated.
clang++-23 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -Wl,-O1 -o matrixCorr.so RcppExports.o biweight_mid_corr.o bland_altman.o bland_altman_repeated.o ccc_glmm_poisson.o ccc_repeated.o ccc_repeated_helper.o ccc_repeated_mixed_model.o chatterjee_xi.o cia.o cia_repeated.o cohen_kappa.o concordance_corr.o distance_correlation.o gwet_ac.o hsic.o icc.o kendall_corr.o krippendorff_alpha.o multirater_kappa.o partial_correlation.o pearson.o prob_agree.o rmcorr.o robust_correlations.o schafer_strimmer_shrinkage_correlation.o spearman.o tetrachoric.o validate_corr_input.o weighted_kappa.o -llapack -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lRblas -L/usr/lib/llvm-23/lib/clang/23/lib/linux -L/usr/lib/llvm-23/lib -lflang_rt.runtime -lm -fopenmp -latomic -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpKmZTPl/R.INSTALL242e8c1b4fbf03/matrixCorr/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpKmZTPl/R.INSTALL242e8c1b4fbf03/matrixCorr/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpKmZTPl/R.INSTALL242e8c1b4fbf03/matrixCorr/src'
installing to /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/00LOCK-matrixCorr/00new/matrixCorr/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (matrixCorr)