* installing to library ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages’
* installing *source* package ‘marked’ ...
** package ‘marked’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘Debian clang version 18.1.4 (1)’
using Fortran compiler: ‘Debian flang-new version 18.1.4 (1)’
using C++ compiler: ‘Debian clang version 18.1.4 (1)’
make[1]: Entering directory '/tmp/Rtmpot0MFl/R.INSTALL1f996a3300febd/marked/src'
clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic  -c bayesCR.cpp -o bayesCR.o
flang-new-18  -fpic  -g -O2 -c cjs.f -o cjs.o
flang-new-18  -fpic  -g -O2 -c cjs1tldmat.f -o cjs1tldmat.o
flang-new-18  -fpic  -g -O2 -c cjs1tlgam.f -o cjs1tlgam.o
flang-new-18  -fpic  -g -O2 -c cjs2tldmat.f -o cjs2tldmat.o
flang-new-18  -fpic  -g -O2 -c cjs2tlgam.f -o cjs2tlgam.o
flang-new-18  -fpic  -g -O2 -c cjsdmat.f -o cjsdmat.o
flang-new-18  -fpic  -g -O2 -c cjsgamma.f -o cjsgamma.o
flang-new-18  -fpic  -g -O2 -c hmm_like.f -o hmm_like.o
clang-18 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -c init.c -o init.o
flang-new-18  -fpic  -g -O2 -c ms2gamma.f -o ms2gamma.o
flang-new-18  -fpic  -g -O2 -c msdmat.f -o msdmat.o
flang-new-18  -fpic  -g -O2 -c msgamma.f -o msgamma.o
flang-new-18  -fpic  -g -O2 -c mvmsdmat.f -o mvmsdmat.o
flang-new-18  -fpic  -g -O2 -c ums2dmat.f -o ums2dmat.o
flang-new-18  -fpic  -g -O2 -c umsdmat.f -o umsdmat.o
clang++-18 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -Wl,-O1 -o marked.so bayesCR.o cjs.o cjs1tldmat.o cjs1tlgam.o cjs2tldmat.o cjs2tlgam.o cjsdmat.o cjsgamma.o hmm_like.o init.o ms2gamma.o msdmat.o msgamma.o mvmsdmat.o ums2dmat.o umsdmat.o -L/usr/lib/llvm-18/lib -lFortran_main -lFortranRuntime -lFortranDecimal -lm -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lR
make[1]: Leaving directory '/tmp/Rtmpot0MFl/R.INSTALL1f996a3300febd/marked/src'
make[1]: Entering directory '/tmp/Rtmpot0MFl/R.INSTALL1f996a3300febd/marked/src'
make[1]: Leaving directory '/tmp/Rtmpot0MFl/R.INSTALL1f996a3300febd/marked/src'
installing to /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/00LOCK-marked/00new/marked/libs
** R
** data
** demo
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (marked)