- using R Under development (unstable) (2025-06-27 r88363)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
Debian clang version 19.1.7 (3+b1)
Debian flang-new version 19.1.7 (3+b1)
- running under: Debian GNU/Linux 13 (trixie)
- using session charset: UTF-8
- checking for file ‘lessSEM/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘lessSEM’ version ‘1.5.5’
- package encoding: UTF-8
- checking CRAN incoming feasibility ... [3s/5s] OK
- checking package namespace information ... OK
- checking package dependencies ... INFO
Package in Depends/Imports which should probably only be in LinkingTo: ‘RcppArmadillo’
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking serialization versions ... OK
- checking whether package ‘lessSEM’ can be installed ... OK
See the install log for details.
- used C++ compiler: ‘Debian clang version 19.1.7 (3+b1)’
- checking C++ specification ... OK
- checking package directory ... OK
- checking for future file timestamps ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... NOTE
Missing dependency on R >= 4.1.0 because package code uses the pipe
|> or function shorthand \(...) syntax added in R 4.1.0.
File(s) using such syntax:
‘addCappedL1.Rd’ ‘addElasticNet.Rd’ ‘addLasso.Rd’ ‘addLsp.Rd’
‘addMcp.Rd’ ‘addScad.Rd’ ‘fit.Rd’
‘getTuningParameterConfiguration.Rd’ ‘mixedPenalty.Rd’
‘regularizationHelper.R’ ‘stabilitySelection.R’
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [4s/6s] OK
- checking whether the package can be loaded with stated dependencies ... [4s/5s] OK
- checking whether the package can be unloaded cleanly ... [4s/4s] OK
- checking whether the namespace can be loaded with stated dependencies ... [3s/4s] OK
- checking whether the namespace can be unloaded cleanly ... [4s/5s] OK
- checking loading without being on the library search path ... [4s/5s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [36s/48s] OK
- checking Rd files ... [2s/3s] OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... NOTE
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
lessSEM.Rd: Stat
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking line endings in C/C++/Fortran sources/headers ... OK
- checking line endings in Makefiles ... OK
- checking compilation flags in Makevars ... OK
- checking for GNU extensions in Makefiles ... INFO
GNU make is a SystemRequirements.
- checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
- checking use of PKG_*FLAGS in Makefiles ... OK
- checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
- checking pragmas in C/C++ headers and code ... OK
- checking compilation flags used ... OK
- checking compiled code ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [100s/135s] OK
Examples with CPU (user + system) or elapsed time > 5s
user system elapsed
cvAdaptiveLasso 4.566 0.027 6.114
cvMcp 4.530 0.024 5.352
adaptiveLasso 4.241 0.174 6.970
cvSmoothAdaptiveLasso 4.318 0.008 5.515
stabilitySelection 4.228 0.004 5.693
cvSmoothLasso 4.098 0.000 5.309
gpRidge 4.079 0.000 5.385
cvRidge 3.789 0.004 5.668
cvLsp 3.652 0.008 5.216
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [15s/20s] OK
- checking PDF version of manual ... [13s/17s] OK
- checking HTML version of manual ... [9s/17s] OK
- checking for non-standard things in the check directory ... OK
- DONE
Status: 2 NOTEs