• using R Under development (unstable) (2025-12-18 r89199)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     Debian clang version 21.1.7 (1)     Debian flang version 21.1.7 (1)
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8
• checking for file ‘irg/DESCRIPTION’ ... OK
• this is package ‘irg’ version ‘0.1.6’
• package encoding: UTF-8
• checking CRAN incoming feasibility ... [1s/1s] OK
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking serialization versions ... OK
• checking whether package ‘irg’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [0s/1s] OK
• checking whether the package can be loaded with stated dependencies ... [0s/1s] OK
• checking whether the package can be unloaded cleanly ... [0s/0s] OK
• checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
• checking whether the namespace can be unloaded cleanly ... [0s/1s] OK
• checking loading without being on the library search path ... [0s/1s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [4s/6s] OK
• checking Rd files ... [0s/0s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking R/sysdata.rda ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [1s/1s] ERROR Running examples in ‘irg-Ex.R’ failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: calc_irg > ### Title: IRG > ### Aliases: calc_irg > > ### ** Examples > > # Load data.table > library(data.table) Attaching package: ‘data.table’ The following object is masked from ‘package:base’:     %notin% > > # Read in example data > ndvi <- fread(system.file("extdata", "sampled-ndvi-MODIS-MOD13Q1.csv", package = "irg")) > > # Filter and scale NDVI time series > filter_ndvi(ndvi) Error in `[.data.table`(DT, , `:=`(winter, stats::quantile(filtered, probs = probs, :   attempt access index 6/6 in VECTOR_ELT Calls: filter_ndvi -> filter_winter -> [ -> [.data.table Execution halted
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [1s/2s] ERROR   Running ‘tinytest.R’ [1s/2s] Running the tests in ‘tests/tinytest.R’ failed. Complete output:   >   > if ( requireNamespace("tinytest", quietly=TRUE) ){   + tinytest::test_package("irg")   + }      Attaching package: 'data.table'      The following object is masked from 'package:base':          %notin%         test-filter.R................. 0 tests   test-filter.R................. 0 tests   test-filter.R................. 0 tests   test-filter.R................. 0 tests   test-filter.R................. 1 tests [0;32mOK [0m   test-filter.R................. 2 tests [0;32mOK [0m   test-filter.R................. 3 tests [0;32mOK [0m   test-filter.R................. 3 tests [0;32mOK [0m   test-filter.R................. 4 tests [0;32mOK [0m   test-filter.R................. 4 tests [0;32mOK [0m   test-filter.R................. 5 tests [0;32mOK [0m   test-filter.R................. 6 tests [0;32mOK [0m   test-filter.R................. 7 tests [0;32mOK [0m   test-filter.R................. 8 tests [0;32mOK [0m   test-filter.R................. 9 tests [0;32mOK [0m   test-filter.R................. 9 tests [0;32mOK [0m   test-filter.R................. 10 tests [0;31m1 fails [0m Error in `[.data.table`(DT, , `:=`(winter, stats::quantile(filtered, probs = probs, :     attempt access index 6/6 in VECTOR_ELT   Calls: <Anonymous> ... FUN -> eval -> eval -> filter_winter -> [ -> [.data.table   Execution halted
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [4s/7s] ERROR Error(s) in re-building vignettes:   ... --- re-building ‘example-scripts.Rmd’ using rmarkdown [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. --- finished re-building ‘example-scripts.Rmd’ --- re-building ‘getting-started-with-irg.Rmd’ using rmarkdown Quitting from getting-started-with-irg.Rmd:185-191 [unnamed-chunk-3] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `[.data.table`: ! attempt access index 1/1 in VECTOR_ELT --- Backtrace:     ▆  1. ├─...[]  2. └─data.table:::`[.data.table`(...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'getting-started-with-irg.Rmd' failed with diagnostics: attempt access index 1/1 in VECTOR_ELT --- failed re-building ‘getting-started-with-irg.Rmd’ SUMMARY: processing the following file failed:   ‘getting-started-with-irg.Rmd’ Error: Vignette re-building failed. Execution halted
• checking PDF version of manual ... [4s/6s] OK
• checking HTML version of manual ... [1s/2s] OK
• checking for non-standard things in the check directory ... OK
• DONE

Status: 3 ERRORs