* using log directory ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/httk.Rcheck’
* using R Under development (unstable) (2025-07-13 r88407)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    Debian clang version 19.1.7 (3+b1)
    Debian flang-new version 19.1.7 (3+b1)
* running under: Debian GNU/Linux 13 (trixie)
* using session charset: UTF-8
* checking for file ‘httk/DESCRIPTION’ ... OK
* this is package ‘httk’ version ‘2.6.1’
* package encoding: UTF-8
* checking CRAN incoming feasibility ... [4s/6s] OK
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking serialization versions ... OK
* checking whether package ‘httk’ can be installed ... OK
See 'https://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-debian-clang/httk-00install.html' for details.
* used C compiler: ‘Debian clang version 19.1.7 (3+b1)’
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [4s/5s] OK
* checking whether the package can be loaded with stated dependencies ... [3s/4s] OK
* checking whether the package can be unloaded cleanly ... [3s/4s] OK
* checking whether the namespace can be loaded with stated dependencies ... [3s/4s] OK
* checking whether the namespace can be unloaded cleanly ... [4s/5s] OK
* checking loading without being on the library search path ... [4s/5s] OK
* checking whether startup messages can be suppressed ... [4s/5s] OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [53s/66s] OK
* checking Rd files ... [13s/17s] OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... [1s/2s] OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking R/sysdata.rda ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking pragmas in C/C++ headers and code ... OK
* checking compilation flags used ... OK
* checking compiled code ... OK
* checking installed files from ‘inst/doc’ ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... [94s/114s] OK
Examples with CPU (user + system) or elapsed time > 5s
                          user system elapsed
calc_vdist               9.968  0.034  10.782
solve_1tri_pbtk          6.334  0.000   7.453
parameterize_steadystate 5.913  0.026   6.737
solve_model              5.884  0.040   7.025
solve_1comp              5.187  0.012   5.683
parameterize_3comp2      4.926  0.001   5.541
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ... [232s/286s] OK
  Running ‘1comp_test.R’ [23s/27s]
  Comparing ‘1comp_test.Rout’ to ‘1comp_test.Rout.save’ ... OK
  Running ‘3comp_test.R’ [16s/20s]
  Comparing ‘3comp_test.Rout’ to ‘3comp_test.Rout.save’ ... OK
  Running ‘3compss_test.R’ [13s/17s]
  Comparing ‘3compss_test.Rout’ to ‘3compss_test.Rout.save’ ... OK
  Running ‘adddata_test.R’ [9s/14s]
  Comparing ‘adddata_test.Rout’ to ‘adddata_test.Rout.save’ ... OK
  Running ‘caco2_test.R’ [19s/25s]
  Comparing ‘caco2_test.Rout’ to ‘caco2_test.Rout.save’ ... OK
  Running ‘cheminfo_test.R’ [9s/11s]
  Comparing ‘cheminfo_test.Rout’ to ‘cheminfo_test.Rout.save’ ... OK
  Running ‘fetal_pbtk_testing.R’ [11s/14s]
  Comparing ‘fetal_pbtk_testing.Rout’ to ‘fetal_pbtk_testing.Rout.save’ ... OK
  Running ‘ionization_tests.R’ [4s/5s]
  Comparing ‘ionization_tests.Rout’ to ‘ionization_tests.Rout.save’ ... OK
  Running ‘ivive_test.R’ [35s/39s]
  Comparing ‘ivive_test.Rout’ to ‘ivive_test.Rout.save’ ... OK
  Running ‘montecarlo_tests.R’ [25s/32s]
  Comparing ‘montecarlo_tests.Rout’ to ‘montecarlo_tests.Rout.save’ ... OK
  Running ‘other_tests.R’ [12s/15s]
  Comparing ‘other_tests.Rout’ to ‘other_tests.Rout.save’ ... OK
  Running ‘pbtk_test.R’ [12s/16s]
  Comparing ‘pbtk_test.Rout’ to ‘pbtk_test.Rout.save’ ... OK
  Running ‘solve_gas_test.R’ [9s/11s]
  Comparing ‘solve_gas_test.Rout’ to ‘solve_gas_test.Rout.save’ ... OK
  Running ‘testthat.R’ [26s/32s]
  Running ‘unit_test.R’ [7s/8s]
  Comparing ‘unit_test.Rout’ to ‘unit_test.Rout.save’ ... OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... [159s/199s] OK
* checking PDF version of manual ... [18s/24s] OK
* checking HTML version of manual ... [13s/20s] OK
* checking for non-standard things in the check directory ... OK
* DONE
Status: OK