* installing to library ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages’
* installing *source* package ‘geocmeans’ ...
** this is package ‘geocmeans’ version ‘0.3.4’
** package ‘geocmeans’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘Debian clang version 19.1.7 (7)’
using C++17
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpKWKIqg/R.INSTALL158ec63cc007e/geocmeans/src'
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp -fpic  -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator  -c FCM_functions.cpp -o FCM_functions.o
FCM_functions.cpp:211:9: warning: unused variable 'k' [-Wunused-variable]
  211 |   int i,k,j;
      |         ^
1 warning generated.
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp -fpic  -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator  -c GFCM_functions.cpp -o GFCM_functions.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp -fpic  -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator  -c RcppExports.cpp -o RcppExports.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp -fpic  -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator  -c focal_cpp.cpp -o focal_cpp.o
focal_cpp.cpp:244:10: warning: unused variable 'distsums' [-Wunused-variable]
  244 |   double distsums;
      |          ^~~~~~~~
1 warning generated.
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp -fpic  -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator  -c jaccard_idx.cpp -o jaccard_idx.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp -fpic  -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator  -c moran_for_rasters.cpp -o moran_for_rasters.o
moran_for_rasters.cpp:83:9: warning: unused variable 'weight' [-Wunused-variable]
   83 |   float weight = 1.0;
      |         ^~~~~~
moran_for_rasters.cpp:164:9: warning: unused variable 'weight' [-Wunused-variable]
  164 |   float weight = 1.0;
      |         ^~~~~~
moran_for_rasters.cpp:356:7: warning: variable 'N' set but not used [-Wunused-but-set-variable]
  356 |   int N = 0;
      |       ^
moran_for_rasters.cpp:479:7: warning: variable 'N' set but not used [-Wunused-but-set-variable]
  479 |   int N = 0;
      |       ^
moran_for_rasters.cpp:480:7: warning: variable 'wr' set but not used [-Wunused-but-set-variable]
  480 |   int wr,wc;
      |       ^
moran_for_rasters.cpp:480:10: warning: variable 'wc' set but not used [-Wunused-but-set-variable]
  480 |   int wr,wc;
      |          ^
moran_for_rasters.cpp:613:27: warning: unused variable 'nn' [-Wunused-variable]
  613 |   int r,c,lr,hr,lc,hc,i,j,nn,ii,jj;
      |                           ^~
moran_for_rasters.cpp:613:30: warning: unused variable 'ii' [-Wunused-variable]
  613 |   int r,c,lr,hr,lc,hc,i,j,nn,ii,jj;
      |                              ^~
moran_for_rasters.cpp:613:33: warning: unused variable 'jj' [-Wunused-variable]
  613 |   int r,c,lr,hr,lc,hc,i,j,nn,ii,jj;
      |                                 ^~
moran_for_rasters.cpp:614:7: warning: unused variable 'N' [-Wunused-variable]
  614 |   int N = 0;
      |       ^
moran_for_rasters.cpp:615:7: warning: variable 'wr' set but not used [-Wunused-but-set-variable]
  615 |   int wr,wc;
      |       ^
moran_for_rasters.cpp:615:10: warning: variable 'wc' set but not used [-Wunused-but-set-variable]
  615 |   int wr,wc;
      |          ^
moran_for_rasters.cpp:616:7: warning: unused variable 'counter' [-Wunused-variable]
  616 |   int counter = 0;
      |       ^~~~~~~
moran_for_rasters.cpp:625:10: warning: unused variable 'euc_dist' [-Wunused-variable]
  625 |   double euc_dist, dij;
      |          ^~~~~~~~
14 warnings generated.
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp -fpic  -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator  -c shared_functions.cpp -o shared_functions.o
clang++-19 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -Wl,-O1 -o geocmeans.so FCM_functions.o GFCM_functions.o RcppExports.o focal_cpp.o jaccard_idx.o moran_for_rasters.o shared_functions.o -fopenmp -llapack -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lRblas -L/usr/lib/llvm-19/lib -lFortranRuntime -lFortranDecimal -lm -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpKWKIqg/R.INSTALL158ec63cc007e/geocmeans/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpKWKIqg/R.INSTALL158ec63cc007e/geocmeans/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpKWKIqg/R.INSTALL158ec63cc007e/geocmeans/src'
installing to /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/00LOCK-geocmeans/00new/geocmeans/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (geocmeans)