Install log for 'gdalraster'

* installing to library ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages’
* installing *source* package ‘gdalraster’ ...
** this is package ‘gdalraster’ version ‘2.1.0’
** package ‘gdalraster’ successfully unpacked and MD5 sums checked
** using staged installation
configure: CC: clang-19 -std=gnu23
configure: CXX: clang++-19 -std=gnu++17
checking for gdal-config... /usr/bin/gdal-config
checking gdal-config usability... yes
configure: GDAL: 3.10.3
checking GDAL version >= 3.1.0... yes
checking GDAL version != 3.6.0... yes
checking whether the C++ compiler works... yes
checking for C++ compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether the compiler supports GNU C++... yes
checking whether clang++-19 -std=gnu++17 accepts -g... yes
checking for clang++-19 -std=gnu++17 option to enable C++11 features... none needed
checking for stdio.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for strings.h... yes
checking for sys/stat.h... yes
checking for sys/types.h... yes
checking for unistd.h... yes
checking for gdal.h... yes
checking GDAL: linking with --libs only... yes
checking GDAL: checking whether GEOS is available at runtime:... yes
configure: pkg-config proj exists, will use it
configure: PROJ data directory: /usr/share/proj
checking GDAL: checking whether PROJ is available at runtime:... yes
configure: Package CPP flags:  -I/usr/include/gdal
configure: Package LIBS:  -L/usr/lib/x86_64-linux-gnu -lgdal
configure: creating ./config.status
config.status: creating src/Makevars
** libs
using C++ compiler: ‘Debian clang version 19.1.7 (3+b1)’
using C++17
make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmplom7zA/R.INSTALL1cc28e6115f7f7/gdalraster/src'
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/include/gdal -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/nanoarrow/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppInt64/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator  -c RcppExports.cpp -o RcppExports.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/include/gdal -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/nanoarrow/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppInt64/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator  -c cmb_table.cpp -o cmb_table.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/include/gdal -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/nanoarrow/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppInt64/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator  -c gdal_dt.cpp -o gdal_dt.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/include/gdal -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/nanoarrow/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppInt64/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator  -c gdal_exp.cpp -o gdal_exp.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/include/gdal -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/nanoarrow/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppInt64/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator  -c gdal_vsi.cpp -o gdal_vsi.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/include/gdal -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/nanoarrow/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppInt64/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator  -c gdalraster.cpp -o gdalraster.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/include/gdal -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/nanoarrow/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppInt64/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator  -c gdalvector.cpp -o gdalvector.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/include/gdal -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/nanoarrow/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppInt64/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator  -c geom_api.cpp -o geom_api.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/include/gdal -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/nanoarrow/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppInt64/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator  -c ogr_util.cpp -o ogr_util.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/include/gdal -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/nanoarrow/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppInt64/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator  -c progress_r.cpp -o progress_r.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/include/gdal -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/nanoarrow/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppInt64/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator  -c rcpp_util.cpp -o rcpp_util.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/include/gdal -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/nanoarrow/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppInt64/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator  -c running_stats.cpp -o running_stats.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/include/gdal -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/nanoarrow/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppInt64/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator  -c srs_api.cpp -o srs_api.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/include/gdal -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/nanoarrow/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppInt64/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator  -c transform.cpp -o transform.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/include/gdal -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/nanoarrow/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppInt64/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator  -c vsifile.cpp -o vsifile.o
vsifile.cpp:151:25: warning: implicit conversion from 'unsigned long' to 'typename storage_type<14>::type' (aka 'double') changes value from 18446744073709551615 to 18446744073709551616 [-Wimplicit-const-int-float-conversion]
  151 |         if (nbytes[0] > SIZE_MAX)
      |                       ~ ^~~~~~~~
/usr/include/stdint.h:216:22: note: expanded from macro 'SIZE_MAX'
  216 | #  define SIZE_MAX              (18446744073709551615UL)
      |                                  ^~~~~~~~~~~~~~~~~~~~~~
1 warning generated.
clang++-19 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -Wl,-O1 -o gdalraster.so RcppExports.o cmb_table.o gdal_dt.o gdal_exp.o gdal_vsi.o gdalraster.o gdalvector.o geom_api.o ogr_util.o progress_r.o rcpp_util.o running_stats.o srs_api.o transform.o vsifile.o -L/usr/lib/x86_64-linux-gnu -lgdal -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmplom7zA/R.INSTALL1cc28e6115f7f7/gdalraster/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmplom7zA/R.INSTALL1cc28e6115f7f7/gdalraster/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmplom7zA/R.INSTALL1cc28e6115f7f7/gdalraster/src'
installing to /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/00LOCK-gdalraster/00new/gdalraster/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (gdalraster)