* installing to library ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages’
* installing *source* package ‘fclust’ ...
** this is package ‘fclust’ version ‘2.1.2’
** package ‘fclust’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘Debian clang version 19.1.7 (7)’
using C++ compiler: ‘Debian clang version 19.1.7 (7)’
make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpj57IU5/R.INSTALL16f1e66ca2fd40/fclust/src'
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c F.cpp -o F.o
F.cpp:51:22: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
51 | kappaFin = arma::is_finite(kappa);
| ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here
164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]]
| ^
F.cpp:112:22: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
112 | kappaFin = arma::is_finite(kappa);
| ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here
164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]]
| ^
2 warnings generated.
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c FKM_rcpp.cpp -o FKM_rcpp.o
FKM_rcpp.cpp:87:14: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
87 | if(arma::is_finite(func) == true)
| ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here
164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]]
| ^
FKM_rcpp.cpp:261:14: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
261 | if(arma::is_finite(func) == true)
| ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here
164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]]
| ^
FKM_rcpp.cpp:431:27: warning: 'is_finite<arma::subview<double>>' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
431 | nan_check = arma::is_finite(U.row(i));
| ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:178:3: note: 'is_finite<arma::subview<double>>' has been explicitly marked deprecated here
178 | [[deprecated("change arma::is_finite(X) to X.is_finite()")]]
| ^
FKM_rcpp.cpp:476:14: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
476 | if(arma::is_finite(func) == true)
| ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here
164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]]
| ^
FKM_rcpp.cpp:488:12: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
488 | if(arma::is_finite(func_opt)){
| ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here
164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]]
| ^
FKM_rcpp.cpp:587:29: warning: 'is_finite<arma::subview<double>>' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
587 | nan_check = arma::is_finite(U.row(i));
| ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:178:3: note: 'is_finite<arma::subview<double>>' has been explicitly marked deprecated here
178 | [[deprecated("change arma::is_finite(X) to X.is_finite()")]]
| ^
FKM_rcpp.cpp:710:14: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
710 | if(arma::is_finite(func) == true)
| ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here
164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]]
| ^
FKM_rcpp.cpp:896:22: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
896 | if(arma::is_finite(U(i,j)) == false)
| ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here
164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]]
| ^
FKM_rcpp.cpp:919:14: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
919 | if(arma::is_finite(func) == true)
| ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here
164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]]
| ^
FKM_rcpp.cpp:1018:20: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
1018 | if(arma::is_finite(U(i,j)) == false)
| ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here
164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]]
| ^
FKM_rcpp.cpp:1137:27: warning: 'is_finite<arma::subview<double>>' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
1137 | nan_check = arma::is_finite(U.row(i));
| ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:178:3: note: 'is_finite<arma::subview<double>>' has been explicitly marked deprecated here
178 | [[deprecated("change arma::is_finite(X) to X.is_finite()")]]
| ^
FKM_rcpp.cpp:1193:14: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
1193 | if(arma::is_finite(func) == true)
| ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here
164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]]
| ^
FKM_rcpp.cpp:1206:12: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
1206 | if(arma::is_finite(func_opt)){
| ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here
164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]]
| ^
FKM_rcpp.cpp:1289:25: warning: 'is_finite<arma::subview<double>>' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
1289 | nan_check = arma::is_finite(U.row(i));
| ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:178:3: note: 'is_finite<arma::subview<double>>' has been explicitly marked deprecated here
178 | [[deprecated("change arma::is_finite(X) to X.is_finite()")]]
| ^
FKM_rcpp.cpp:1450:14: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
1450 | if(arma::is_finite(func) == true)
| ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here
164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]]
| ^
FKM_rcpp.cpp:1644:14: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
1644 | if(arma::is_finite(func) == true)
| ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here
164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]]
| ^
FKM_rcpp.cpp:1880:14: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
1880 | if(arma::is_finite(func) == true)
| ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here
164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]]
| ^
FKM_rcpp.cpp:1892:12: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
1892 | if(arma::is_finite(func_opt)){
| ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here
164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]]
| ^
FKM_rcpp.cpp:2004:29: warning: 'is_finite<arma::subview<double>>' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
2004 | nan_check = arma::is_finite(U.row(i));
| ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:178:3: note: 'is_finite<arma::subview<double>>' has been explicitly marked deprecated here
178 | [[deprecated("change arma::is_finite(X) to X.is_finite()")]]
| ^
FKM_rcpp.cpp:2153:22: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
2153 | if(arma::is_finite(U(i,j)) == false)
| ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here
164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]]
| ^
FKM_rcpp.cpp:2175:14: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
2175 | if(arma::is_finite(func) == true)
| ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here
164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]]
| ^
FKM_rcpp.cpp:2286:20: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
2286 | if(arma::is_finite(U(i,j)) == false)
| ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here
164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]]
| ^
FKM_rcpp.cpp:2442:14: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
2442 | if(arma::is_finite(func) == true)
| ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here
164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]]
| ^
FKM_rcpp.cpp:2454:12: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
2454 | if(arma::is_finite(func_opt)){
| ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here
164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]]
| ^
FKM_rcpp.cpp:2695:14: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
2695 | if(arma::is_finite(func) == true)
| ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here
164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]]
| ^
FKM_rcpp.cpp:2708:12: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
2708 | if(arma::is_finite(func_opt)){
| ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here
164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]]
| ^
FKM_rcpp.cpp:2974:14: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
2974 | if(arma::is_finite(func) == true)
| ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here
164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]]
| ^
FKM_rcpp.cpp:2987:12: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
2987 | if(arma::is_finite(func_opt)){
| ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here
164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]]
| ^
FKM_rcpp.cpp:3107:31: warning: 'is_finite<arma::subview<double>>' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
3107 | nan_check = arma::is_finite(U.row(i));
| ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:178:3: note: 'is_finite<arma::subview<double>>' has been explicitly marked deprecated here
178 | [[deprecated("change arma::is_finite(X) to X.is_finite()")]]
| ^
FKM_rcpp.cpp:3272:24: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
3272 | if(arma::is_finite(U(i,j)) == false)
| ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here
164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]]
| ^
FKM_rcpp.cpp:3299:14: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
3299 | if(arma::is_finite(func) == true)
| ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here
164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]]
| ^
FKM_rcpp.cpp:3214:7: warning: variable 'countNoConv' set but not used [-Wunused-but-set-variable]
3214 | int countNoConv = 0;
| ^
FKM_rcpp.cpp:3417:22: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
3417 | if(arma::is_finite(U(i,j)) == false)
| ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here
164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]]
| ^
FKM_rcpp.cpp:3541:29: warning: 'is_finite<arma::subview<double>>' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
3541 | nan_check = arma::is_finite(U.row(i));
| ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:178:3: note: 'is_finite<arma::subview<double>>' has been explicitly marked deprecated here
178 | [[deprecated("change arma::is_finite(X) to X.is_finite()")]]
| ^
FKM_rcpp.cpp:3583:14: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
3583 | if(arma::is_finite(func) == true)
| ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here
164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]]
| ^
FKM_rcpp.cpp:3595:12: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
3595 | if(arma::is_finite(func_opt)){
| ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here
164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]]
| ^
FKM_rcpp.cpp:3678:27: warning: 'is_finite<arma::subview<double>>' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
3678 | nan_check = arma::is_finite(U.row(i));
| ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:178:3: note: 'is_finite<arma::subview<double>>' has been explicitly marked deprecated here
178 | [[deprecated("change arma::is_finite(X) to X.is_finite()")]]
| ^
FKM_rcpp.cpp:3857:27: warning: 'is_finite<arma::subview<double>>' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
3857 | nan_check = arma::is_finite(U.row(i));
| ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:178:3: note: 'is_finite<arma::subview<double>>' has been explicitly marked deprecated here
178 | [[deprecated("change arma::is_finite(X) to X.is_finite()")]]
| ^
FKM_rcpp.cpp:3910:14: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
3910 | if(arma::is_finite(func) == true)
| ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here
164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]]
| ^
FKM_rcpp.cpp:3922:12: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
3922 | if(arma::is_finite(func_opt)){
| ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here
164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]]
| ^
FKM_rcpp.cpp:4045:25: warning: 'is_finite<arma::subview<double>>' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
4045 | nan_check = arma::is_finite(U.row(i));
| ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:178:3: note: 'is_finite<arma::subview<double>>' has been explicitly marked deprecated here
178 | [[deprecated("change arma::is_finite(X) to X.is_finite()")]]
| ^
FKM_rcpp.cpp:4242:17: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
4242 | if(!arma::is_finite(func))
| ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here
164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]]
| ^
FKM_rcpp.cpp:4253:14: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
4253 | if(arma::is_finite(func) == true)
| ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here
164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]]
| ^
FKM_rcpp.cpp:4381:17: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
4381 | if(!arma::is_finite(func))
| ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here
164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]]
| ^
FKM_rcpp.cpp:4542:17: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
4542 | if(!arma::is_finite(func))
| ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here
164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]]
| ^
FKM_rcpp.cpp:4555:14: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
4555 | if(arma::is_finite(func) == true)
| ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here
164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]]
| ^
FKM_rcpp.cpp:4698:15: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
4698 | if(!arma::is_finite(func))
| ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here
164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]]
| ^
47 warnings generated.
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c RcppExports.cpp -o RcppExports.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c centroids.cpp -o centroids.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c distance.cpp -o distance.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c func.cpp -o func.o
func.cpp:124:23: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
124 | finite = (arma::is_finite(D(i,j)) && arma::is_finite(D(j,i)));
| ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here
164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]]
| ^
func.cpp:124:50: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
124 | finite = (arma::is_finite(D(i,j)) && arma::is_finite(D(j,i)));
| ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here
164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]]
| ^
2 warnings generated.
clang-19 -std=gnu23 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c memDeg.cpp -o memDeg.o
memDeg.cpp:139:18: warning: 'is_finite<double>' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
139 | if(arma::is_finite(out(i,j)) == false)
| ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:164:3: note: 'is_finite<double>' has been explicitly marked deprecated here
164 | [[deprecated("change arma::is_finite(val) to std::isfinite(val)")]]
| ^
1 warning generated.
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator -c partition_comp.cpp -o partition_comp.o
clang++-19 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -Wl,-O1 -o fclust.so F.o FKM_rcpp.o RcppExports.o centroids.o distance.o func.o init.o memDeg.o partition_comp.o -llapack -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lRblas -L/usr/lib/llvm-19/lib -lFortranRuntime -lFortranDecimal -lm -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpj57IU5/R.INSTALL16f1e66ca2fd40/fclust/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpj57IU5/R.INSTALL16f1e66ca2fd40/fclust/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpj57IU5/R.INSTALL16f1e66ca2fd40/fclust/src'
installing to /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/00LOCK-fclust/00new/fclust/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (fclust)