* installing to library ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages’
* installing *source* package ‘exdqlm’ ...
** this is package ‘exdqlm’ version ‘1.1.1’
** package ‘exdqlm’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
specified C++17
using C++ compiler: ‘Debian clang version 23.1.0 (2)’
using C++17
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpE4YFaj/R.INSTALL27c65041b9f5ca/exdqlm/src'
clang++-23 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I. -I../inst/include -include zzz_preinclude.h -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -U_GLIBCXX_ASSERTIONS -fpic -g -O3 -Wall -pedantic -c RcppExports.cpp -o RcppExports.o
In file included from RcppExports.cpp:5:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:29:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/Sparse:26:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/SparseCore:61:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
273 | Index count = 0;
| ^
In file included from RcppExports.cpp:5:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:29:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/Sparse:29:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/SparseLU:35:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree
| ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree
| ^
In file included from RcppExports.cpp:5:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:31:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable]
72 | Index replacements = 0;
| ^
In file included from RcppExports.cpp:5:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:37:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/SparseExtra:45:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable]
246 | int count = 0;
| ^
In file included from RcppExports.cpp:4:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo.h:29:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:51:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo:436:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:198:1: warning: unused function template 'arma_stop_runtime_error' [-Wunused-template]
198 | arma_stop_runtime_error(const T1& x)
| ^~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:241:1: warning: unused function template 'arma_print' [-Wunused-template]
241 | arma_print(const T1& x, const T2& y)
| ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:253:1: warning: unused function template 'arma_print' [-Wunused-template]
253 | arma_print(const T1& x, const T2& y, const T3& z)
| ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:335:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
335 | arma_plain_warn(const T1& arg1)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:346:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
346 | arma_plain_warn(const T1& arg1, const T2& arg2)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:357:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
357 | arma_plain_warn(const T1& arg1, const T2& arg2, const T3& arg3)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:368:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
368 | arma_plain_warn(const T1& arg1, const T2& arg2, const T3& arg3, const T4& arg4)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:545:1: warning: unused function template 'arma_incompat_size_string' [-Wunused-template]
545 | arma_incompat_size_string(const subview_cube<eT>& Q, const Mat<eT>& A, const char* x)
| ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from RcppExports.cpp:5:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:28:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/Dense:3:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/Cholesky:32:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/Cholesky/LLT.h:240:14: warning: unused function template 'llt_rank_update_lower' [-Wunused-template]
240 | static Index llt_rank_update_lower(MatrixType& mat, const VectorType& vec, const typename MatrixType::RealScalar& sigma)
| ^~~~~~~~~~~~~~~~~~~~~
In file included from RcppExports.cpp:5:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:28:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/Dense:7:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/Eigenvalues:39:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h:839:13: warning: unused function template 'tridiagonal_qr_step' [-Wunused-template]
839 | static void tridiagonal_qr_step(RealScalar* diag, RealScalar* subdiag, Index start, Index end, Scalar* matrixQ, Index n)
| ^~~~~~~~~~~~~~~~~~~
In file included from RcppExports.cpp:5:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:29:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/Sparse:26:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/SparseCore:55:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/ConservativeSparseSparseProduct.h:18:13: warning: unused function template 'conservative_sparse_sparse_product_impl' [-Wunused-template]
18 | static void conservative_sparse_sparse_product_impl(const Lhs& lhs, const Rhs& rhs, ResultType& res, bool sortedInsertion = false)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/ConservativeSparseSparseProduct.h:270:13: warning: unused function template 'sparse_sparse_to_dense_product_impl' [-Wunused-template]
270 | static void sparse_sparse_to_dense_product_impl(const Lhs& lhs, const Rhs& rhs, ResultType& res)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from RcppExports.cpp:5:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:29:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/Sparse:26:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/SparseCore:56:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseSparseProductWithPruning.h:20:13: warning: unused function template 'sparse_sparse_product_with_pruning_impl' [-Wunused-template]
20 | static void sparse_sparse_product_with_pruning_impl(const Lhs& lhs, const Rhs& rhs, ResultType& res, const typename ResultType::RealScalar& tolerance)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from RcppExports.cpp:5:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:29:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/Sparse:27:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/OrderingMethods:66:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/OrderingMethods/Amd.h:35:21: warning: unused function template 'cs_wclear' [-Wunused-template]
35 | static StorageIndex cs_wclear (StorageIndex mark, StorageIndex lemax, StorageIndex *w, StorageIndex n)
| ^~~~~~~~~
In file included from RcppExports.cpp:5:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:29:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/Sparse:27:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/OrderingMethods:67:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/OrderingMethods/Ordering.h:16:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/OrderingMethods/Eigen_Colamd.h:501:18: warning: unused function template 'init_rows_cols' [-Wunused-template]
501 | static IndexType init_rows_cols /* returns true if OK, or false otherwise */
| ^~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/OrderingMethods/Eigen_Colamd.h:717:13: warning: unused function template 'init_scoring' [-Wunused-template]
717 | static void init_scoring
| ^~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/OrderingMethods/Eigen_Colamd.h:954:18: warning: unused function template 'find_ordering' [-Wunused-template]
954 | static IndexType find_ordering /* return the number of garbage collections */
| ^~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/OrderingMethods/Eigen_Colamd.h:1566:13: warning: unused function template 'detect_super_cols' [-Wunused-template]
1566 | static void detect_super_cols
| ^~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/OrderingMethods/Eigen_Colamd.h:1717:18: warning: unused function template 'garbage_collection' [-Wunused-template]
1717 | static IndexType garbage_collection /* returns the new value of pfree */
| ^~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/OrderingMethods/Eigen_Colamd.h:342:13: warning: unused function template 'compute_ordering' [-Wunused-template]
342 | static bool compute_ordering(IndexType n_row, IndexType n_col, IndexType Alen, IndexType *A, IndexType *p, double knobs[NKnobs], IndexType stats[NStats])
| ^~~~~~~~~~~~~~~~
25 warnings generated.
clang++-23 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I. -I../inst/include -include zzz_preinclude.h -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -U_GLIBCXX_ASSERTIONS -fpic -g -O3 -Wall -pedantic -c builder_mods.cpp -o builder_mods.o
In file included from builder_mods.cpp:13:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo.h:29:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:51:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo:436:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:198:1: warning: unused function template 'arma_stop_runtime_error' [-Wunused-template]
198 | arma_stop_runtime_error(const T1& x)
| ^~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:241:1: warning: unused function template 'arma_print' [-Wunused-template]
241 | arma_print(const T1& x, const T2& y)
| ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:253:1: warning: unused function template 'arma_print' [-Wunused-template]
253 | arma_print(const T1& x, const T2& y, const T3& z)
| ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:335:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
335 | arma_plain_warn(const T1& arg1)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:346:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
346 | arma_plain_warn(const T1& arg1, const T2& arg2)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:357:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
357 | arma_plain_warn(const T1& arg1, const T2& arg2, const T3& arg3)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:368:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
368 | arma_plain_warn(const T1& arg1, const T2& arg2, const T3& arg3, const T4& arg4)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:545:1: warning: unused function template 'arma_incompat_size_string' [-Wunused-template]
545 | arma_incompat_size_string(const subview_cube<eT>& Q, const Mat<eT>& A, const char* x)
| ^~~~~~~~~~~~~~~~~~~~~~~~~
8 warnings generated.
clang++-23 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I. -I../inst/include -include zzz_preinclude.h -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -U_GLIBCXX_ASSERTIONS -fpic -g -O3 -Wall -pedantic -c exAL.cpp -o exAL.o
exAL.cpp:15:14: warning: unused variable 'INF' [-Wunused-const-variable]
15 | const double INF = std::numeric_limits<double>::infinity();
| ^~~
1 warning generated.
clang++-23 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I. -I../inst/include -include zzz_preinclude.h -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -U_GLIBCXX_ASSERTIONS -fpic -g -O3 -Wall -pedantic -c exdqlm.cpp -o exdqlm.o
clang++-23 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I. -I../inst/include -include zzz_preinclude.h -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -U_GLIBCXX_ASSERTIONS -fpic -g -O3 -Wall -pedantic -c kalman.cpp -o kalman.o
In file included from kalman.cpp:21:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:29:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/Sparse:26:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/SparseCore:61:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
273 | Index count = 0;
| ^
In file included from kalman.cpp:21:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:29:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/Sparse:29:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/SparseLU:35:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree
| ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree
| ^
In file included from kalman.cpp:21:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:31:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable]
72 | Index replacements = 0;
| ^
In file included from kalman.cpp:21:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:37:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/SparseExtra:45:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable]
246 | int count = 0;
| ^
In file included from kalman.cpp:20:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo.h:29:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:51:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo:436:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:241:1: warning: unused function template 'arma_print' [-Wunused-template]
241 | arma_print(const T1& x, const T2& y)
| ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:253:1: warning: unused function template 'arma_print' [-Wunused-template]
253 | arma_print(const T1& x, const T2& y, const T3& z)
| ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:346:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
346 | arma_plain_warn(const T1& arg1, const T2& arg2)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:357:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
357 | arma_plain_warn(const T1& arg1, const T2& arg2, const T3& arg3)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:368:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
368 | arma_plain_warn(const T1& arg1, const T2& arg2, const T3& arg3, const T4& arg4)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:545:1: warning: unused function template 'arma_incompat_size_string' [-Wunused-template]
545 | arma_incompat_size_string(const subview_cube<eT>& Q, const Mat<eT>& A, const char* x)
| ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from kalman.cpp:21:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:28:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/Dense:3:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/Cholesky:32:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/Cholesky/LLT.h:240:14: warning: unused function template 'llt_rank_update_lower' [-Wunused-template]
240 | static Index llt_rank_update_lower(MatrixType& mat, const VectorType& vec, const typename MatrixType::RealScalar& sigma)
| ^~~~~~~~~~~~~~~~~~~~~
In file included from kalman.cpp:21:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:29:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/Sparse:26:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/SparseCore:55:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/ConservativeSparseSparseProduct.h:18:13: warning: unused function template 'conservative_sparse_sparse_product_impl' [-Wunused-template]
18 | static void conservative_sparse_sparse_product_impl(const Lhs& lhs, const Rhs& rhs, ResultType& res, bool sortedInsertion = false)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/ConservativeSparseSparseProduct.h:270:13: warning: unused function template 'sparse_sparse_to_dense_product_impl' [-Wunused-template]
270 | static void sparse_sparse_to_dense_product_impl(const Lhs& lhs, const Rhs& rhs, ResultType& res)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from kalman.cpp:21:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:29:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/Sparse:26:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/SparseCore:56:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/SparseSparseProductWithPruning.h:20:13: warning: unused function template 'sparse_sparse_product_with_pruning_impl' [-Wunused-template]
20 | static void sparse_sparse_product_with_pruning_impl(const Lhs& lhs, const Rhs& rhs, ResultType& res, const typename ResultType::RealScalar& tolerance)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from kalman.cpp:21:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:29:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/Sparse:27:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/OrderingMethods:66:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/OrderingMethods/Amd.h:35:21: warning: unused function template 'cs_wclear' [-Wunused-template]
35 | static StorageIndex cs_wclear (StorageIndex mark, StorageIndex lemax, StorageIndex *w, StorageIndex n)
| ^~~~~~~~~
In file included from kalman.cpp:21:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:29:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/Sparse:27:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/OrderingMethods:67:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/OrderingMethods/Ordering.h:16:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/OrderingMethods/Eigen_Colamd.h:501:18: warning: unused function template 'init_rows_cols' [-Wunused-template]
501 | static IndexType init_rows_cols /* returns true if OK, or false otherwise */
| ^~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/OrderingMethods/Eigen_Colamd.h:717:13: warning: unused function template 'init_scoring' [-Wunused-template]
717 | static void init_scoring
| ^~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/OrderingMethods/Eigen_Colamd.h:954:18: warning: unused function template 'find_ordering' [-Wunused-template]
954 | static IndexType find_ordering /* return the number of garbage collections */
| ^~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/OrderingMethods/Eigen_Colamd.h:1566:13: warning: unused function template 'detect_super_cols' [-Wunused-template]
1566 | static void detect_super_cols
| ^~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/OrderingMethods/Eigen_Colamd.h:1717:18: warning: unused function template 'garbage_collection' [-Wunused-template]
1717 | static IndexType garbage_collection /* returns the new value of pfree */
| ^~~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/OrderingMethods/Eigen_Colamd.h:342:13: warning: unused function template 'compute_ordering' [-Wunused-template]
342 | static bool compute_ordering(IndexType n_row, IndexType n_col, IndexType Alen, IndexType *A, IndexType *p, double knobs[NKnobs], IndexType stats[NStats])
| ^~~~~~~~~~~~~~~~
kalman.cpp:88:14: warning: unused variable 'alpha' [-Wunused-const-variable]
88 | const double alpha = 1e-3;
| ^~~~~
kalman.cpp:89:14: warning: unused variable 'beta' [-Wunused-const-variable]
89 | const double beta = 2.0;
| ^~~~
kalman.cpp:90:14: warning: unused variable 'kappa' [-Wunused-const-variable]
90 | const double kappa = 0.0;
| ^~~~~
25 warnings generated.
clang++-23 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I. -I../inst/include -include zzz_preinclude.h -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -U_GLIBCXX_ASSERTIONS -fpic -g -O3 -Wall -pedantic -c matrix_creation.cpp -o matrix_creation.o
clang++-23 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I. -I../inst/include -include zzz_preinclude.h -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -U_GLIBCXX_ASSERTIONS -fpic -g -O3 -Wall -pedantic -c mcmc_ffbs.cpp -o mcmc_ffbs.o
In file included from mcmc_ffbs.cpp:18:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo.h:29:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:51:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo:436:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:241:1: warning: unused function template 'arma_print' [-Wunused-template]
241 | arma_print(const T1& x, const T2& y)
| ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:253:1: warning: unused function template 'arma_print' [-Wunused-template]
253 | arma_print(const T1& x, const T2& y, const T3& z)
| ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:346:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
346 | arma_plain_warn(const T1& arg1, const T2& arg2)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:357:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
357 | arma_plain_warn(const T1& arg1, const T2& arg2, const T3& arg3)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:368:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
368 | arma_plain_warn(const T1& arg1, const T2& arg2, const T3& arg3, const T4& arg4)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:545:1: warning: unused function template 'arma_incompat_size_string' [-Wunused-template]
545 | arma_incompat_size_string(const subview_cube<eT>& Q, const Mat<eT>& A, const char* x)
| ^~~~~~~~~~~~~~~~~~~~~~~~~
6 warnings generated.
clang++-23 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I. -I../inst/include -include zzz_preinclude.h -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -U_GLIBCXX_ASSERTIONS -fpic -g -O3 -Wall -pedantic -c sampling_truncnorm.cpp -o sampling_truncnorm.o
clang++-23 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I. -I../inst/include -include zzz_preinclude.h -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -U_GLIBCXX_ASSERTIONS -fpic -g -O3 -Wall -pedantic -c sampling_utils.cpp -o sampling_utils.o
In file included from sampling_utils.cpp:1:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo.h:29:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:51:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo:436:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:241:1: warning: unused function template 'arma_print' [-Wunused-template]
241 | arma_print(const T1& x, const T2& y)
| ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:253:1: warning: unused function template 'arma_print' [-Wunused-template]
253 | arma_print(const T1& x, const T2& y, const T3& z)
| ^~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:346:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
346 | arma_plain_warn(const T1& arg1, const T2& arg2)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:357:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
357 | arma_plain_warn(const T1& arg1, const T2& arg2, const T3& arg3)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:368:1: warning: unused function template 'arma_plain_warn' [-Wunused-template]
368 | arma_plain_warn(const T1& arg1, const T2& arg2, const T3& arg3, const T4& arg4)
| ^~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include/armadillo_bits/debug.hpp:545:1: warning: unused function template 'arma_incompat_size_string' [-Wunused-template]
545 | arma_incompat_size_string(const subview_cube<eT>& Q, const Mat<eT>& A, const char* x)
| ^~~~~~~~~~~~~~~~~~~~~~~~~
6 warnings generated.
clang++-23 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -Wl,-O1 -o exdqlm.so RcppExports.o builder_mods.o exAL.o exdqlm.o kalman.o matrix_creation.o mcmc_ffbs.o sampling_truncnorm.o sampling_utils.o -llapack -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lRblas -L/usr/lib/llvm-23/lib/clang/23/lib/linux -L/usr/lib/llvm-23/lib -lflang_rt.runtime -lm -fopenmp -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpE4YFaj/R.INSTALL27c65041b9f5ca/exdqlm/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpE4YFaj/R.INSTALL27c65041b9f5ca/exdqlm/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpE4YFaj/R.INSTALL27c65041b9f5ca/exdqlm/src'
installing to /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/00LOCK-exdqlm/00new/exdqlm/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (exdqlm)